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Entry information : CgFSD01 (CgFeMnSOD1)
Entry ID 13888
Creation 2016-09-06 (Marcel Zamocky)
Last sequence changes 2016-10-10 (Christophe Dunand)
Sequence status complete
Reviewer Marcel Zamocky
Last annotation changes 2016-10-21 (Marcel Zamocky)
Peroxidase information: CgFSD01 (CgFeMnSOD1)
Name (synonym) CgFSD01 (CgFeMnSOD1)
Class FeSOD    [Orthogroup: FSD001]
Taxonomy Eukaryota Fungi Ascomycota Sordariomycetes Chaetomiaceae Chaetomium
Organism Chaetomium globosum    [TaxId: 38033 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CgFSD01
start..stop		 S start..stop
EsilFSD02 59 0.0000000000928 48..176 12..137
LeFSD03 59 0.000000000287 55..166 65..177
CbraFSD01 56 0.00000000367 18..167 51..195
TsFSD03 56 0.000000004 49..167 60..180
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13888' 'join(1..241,303..1072)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..241 239 N° 2 303..1072 768  
join(1..241,303..1072)


exon

Literature and cross-references CgFSD01 (CgFeMnSOD1)
Literature REFERENCE #1 Cuomo CA et al. (2015) Genome Announc. 3:E0002115
REFERENCE #2 Zamocky M et al. (2016) BMC Genomics 17:763
Protein ref. GenBank:   XP_001220211.1 UniProtKB:   Q2HFL4
DNA ref. GenBank:   NT_165976 (3055543..3056614)
mRNA ref. GenBank:   XM_001220210.1
Cluster/Prediction ref. Genebank:   4386400
Protein sequence: CgFSD01 (CgFeMnSOD1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   336 (296)
PWM (Da):   %s   36419.29 (31839.0) Transmb domain:   %s   o29-51i
PI (pH):   %s   8.62 (8.73) Peptide Signal:   %s   cut: 20 range:20-315
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLRPGLRIAMRPRVGAPARSTLLPLACQARSMHALAPLSYDLKGE
ATQNGISDFLSPAAFNISWTQYQTYLLQKLNILTAETDYESHQIKDILLGTARDPGSAPIFNHASMAHNNHFFFKHISPKPVEVPEPLRSRLEQSFGSMDTLRQEMVYTAAGMFGPGFVWLVKTSQPGLPVSFKVLTTYAAGSPYPAAHWRRQEH
DMNTAAGSGTEAGIATGRAYLDQTAYGTGSSSRWGSGGPGSATARRVAHAPGGTDLVPVLCINTWEHVWLWDYGFGVGAPDRGKLGYAEKWWKHVDWELVQKEADLQRLEMSANAGAPAP
SLSSPSLSSPAPVPRA

Retrieve as FASTA  
Remarks Complete from genomic (scafold 1, 1 intron). Strain=148.51 (CHGG_00990).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTGCGCCCAGGGTTAAGGATAGCGATGCGCCCGCGAGTCGGTGCGCCCGCGAGGTCGACTTTGCTACCGCTGGCCTGCCAGGCACGATCCATGCACGCCCTCGCCCCTCTCTCTTAC
GACCTGAAGGGCGAGGCTACACAAAATGGCATTTCCGACTTCCTGTCGCCCGCCGCCTTCAACATCTCTTGGACCCAGTACCAGACATATCTGCTGCAGAAACTGAACATCTTGACAGCA
GAGGTGTGTTCTTTTCTCCCTCTCCTGTCCTATGTCTCTACAGGCAGACTAACAGACCCTCCAGAAACCGACTACGAATCCCACCAGATCAAGGACATCCTGCTCGGCACCGCCCGCGAC
CCGGGCTCGGCACCCATCTTCAACCACGCCAGCATGGCGCACAACAACCACTTCTTCTTCAAGCACATCTCGCCCAAGCCGGTCGAGGTGCCCGAGCCCCTGCGCAGCCGCCTCGAGCAG
TCCTTCGGCTCCATGGACACCCTCCGCCAGGAGATGGTCTACACGGCCGCCGGCATGTTCGGCCCGGGCTTCGTGTGGCTCGTCAAGACCTCGCAGCCGGGCCTGCCCGTATCCTTCAAG
GTCCTCACCACCTACGCCGCGGGGTCCCCCTACCCAGCAGCCCACTGGCGGCGGCAGGAGCACGACATGAACACCGCCGCCGGCAGCGGCACCGAGGCCGGCATCGCCACGGGCCGGGCC
TACCTCGACCAGACAGCGTACGGAACCGGCAGCAGCAGCCGGTGGGGCAGCGGGGGCCCGGGCAGCGCGACGGCGCGGCGGGTGGCGCACGCGCCGGGCGGCACGGACCTGGTCCCCGTG
CTGTGCATCAACACGTGGGAGCACGTGTGGCTGTGGGACTACGGCTTCGGCGTCGGCGCCCCCGACCGCGGCAAGCTGGGCTACGCCGAGAAGTGGTGGAAGCACGTCGACTGGGAGCTC
GTCCAGAAGGAGGCCGACCTGCAGCGCCTCGAGATGTCGGCCAACGCCGGCGCCCCCGCCCCCTCCCTCTCCTCCCCTTCCCTCTCCTCGCCTGCCCCCGTCCCCCGGGCATGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTGCGCCCAGGGTTAAGGATAGCGATGCGCCCGCGAGTCGGTGCGCCCGCGAGGTCGACTTTGCTACCGCTGGCCTGCCAGGCACGATCCATGCACGCCCTCGCCCCTCTCTCTTAC
GACCTGAAGGGCGAGGCTACACAAAATGGCATTTCCGACTTCCTGTCGCCCGCCGCCTTCAACATCTCTTGGACCCAGTACCAGACATATCTGCTGCAGAAACTGAACATCTTGACAGCA
GAAACCGACTACGAATCCCACCAGATCAAGGACATCCTGCTCGGCACCGCCCGCGACCCGGGCTCGGCACCCATCTTCAACCACGCCAGCATGGCGCACAACAACCACTTCTTCTTCAAG
CACATCTCGCCCAAGCCGGTCGAGGTGCCCGAGCCCCTGCGCAGCCGCCTCGAGCAGTCCTTCGGCTCCATGGACACCCTCCGCCAGGAGATGGTCTACACGGCCGCCGGCATGTTCGGC
CCGGGCTTCGTGTGGCTCGTCAAGACCTCGCAGCCGGGCCTGCCCGTATCCTTCAAGGTCCTCACCACCTACGCCGCGGGGTCCCCCTACCCAGCAGCCCACTGGCGGCGGCAGGAGCAC
GACATGAACACCGCCGCCGGCAGCGGCACCGAGGCCGGCATCGCCACGGGCCGGGCCTACCTCGACCAGACAGCGTACGGAACCGGCAGCAGCAGCCGGTGGGGCAGCGGGGGCCCGGGC
AGCGCGACGGCGCGGCGGGTGGCGCACGCGCCGGGCGGCACGGACCTGGTCCCCGTGCTGTGCATCAACACGTGGGAGCACGTGTGGCTGTGGGACTACGGCTTCGGCGTCGGCGCCCCC
GACCGCGGCAAGCTGGGCTACGCCGAGAAGTGGTGGAAGCACGTCGACTGGGAGCTCGTCCAGAAGGAGGCCGACCTGCAGCGCCTCGAGATGTCGGCCAACGCCGGCGCCCCCGCCCCC
TCCCTCTCCTCCCCTTCCCTCTCCTCGCCTGCCCCCGTCCCCCGGGCATGA

Retrieve as FASTA