View Redoxidase 13900

Entry information : PpaFer01 (HYPADRAFT_181672)

Entry ID	13900
Creation	2016-10-14 (Christophe Dunand)
Last sequence changes	2016-10-14 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2016-10-14 (Christophe Dunand)

Peroxidase information: PpaFer01 (HYPADRAFT_181672)

Name (synonym)

PpaFer01 (HYPADRAFT_181672)

Class

Ferritin [Orthogroup: Fer001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella

Organism

Physcomitrella patens [TaxId: 3218 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	PpaFer01 start..stop	S start..stop
PpaFer03	419	3.76e-150	20..263	19..262
PpaFer02	395	9.11e-141	20..262	21..260
MpFer02	315	3.27e-109	3..262	1..258
ThasFer01-1	311	8.52e-108	46..262	35..258

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1383250..1383578	327	N° 2	1382832..1382915	82	N° 3	1382661..1382721	59	N° 4	1382458..1382545	86
N° 5	1382284..1382345	60	N° 6	1382054..1382119	64	N° 7	1381864..1381927	62	N° 8	1381321..1381358	36
complement(join(1381321..1381358,1381864..1381927,1382054..1382119,1382284..1382 345,1382458..1382545,1382661..1382721,1382832..1382915,1383250..1383578))

Literature and cross-references PpaFer01 (HYPADRAFT_181672)

DNA ref.	GenBank: NW_001865307.1 (1383578..1381321)
Cluster/Prediction ref.	Genebank: 5925135

Protein sequence: PpaFer01 (HYPADRAFT_181672)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	263
PWM (Da):	29263.71
PI (pH):	6.42

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MVMARAVVAGSVNTSAGAVLATRSGDQGSLSASCKSVVVRSRSLVSQSRVVAVRASGQEFATKTLSGVVFEPFSEVQDQLVKVTTSPQLESLARQRFAPSCEAAINDQINVEYNVSYVYH
ALYAYFDRDNVGLPGFAQYFKHASDEEREHAEKLMRYNQRGGKVKLQSIVMPLMEFDHHEKGDALYAMELALALEKLTNEKLFQLHAAADANDHQMTEFIEREFLTEQVEAIKKVSEYVS
QLRRVGQGHGVYHFDLQLQEA

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGTGATGGCGCGCGCAGTGGTGGCGGGGTCCGTTAACACATCGGCTGGGGCCGTGCTGGCCACAAGGAGTGGTGACCAGGGGAGTTTGAGCGCTAGCTGTAAGAGTGTGGTGGTGCGA
AGCAGGAGTCTAGTGTCGCAGAGTAGAGTAGTCGCTGTGAGAGCCTCTGGTCAGGAGTTCGCGACGAAGACATTATCGGGAGTGGTGTTTGAGCCCTTCAGTGAGGTGCAGGATCAGCTT
GTGAAAGTTACTACATCGCCGCAGTTGGAGTCGTTGGCTCGCCAGCGGTTCGCCCCTTCTTGTGAGGCTGCCATCAATGACCAGATCAAGTATAGCTTCGTTCTGCATCGTTTTTTTGTC
TGTTTCTATTTTTATTTTTATTTGTATCTTGTTTGTCATTATATCTTACCGAGGTTTTAAGGTGTACTAAAATTGAGAAGTGTCAAGGGCGCTTCGATGCTGCTTTTTATTTCGAGAGGT
CTTGGTGACCAGGAATAGTAGAGTGAAACCGTAGTCGTCTTTAAATGTTTGTTCTACGTGTCATCAGACGTTTTCTTGTTTCTTCGAAACTCTAAAACCGATATTGCATCACGCTGTCTC
ACGTGCTGATATGCTTCTCAGTCGCTGTAACCTGTGTCGTCCTATTCTTTTATCGCTTTGCAGTGTGTGGAATACAACGTTTCATACGTCTACCATGCTCTTTATGCCTACTTCGATCGT
GACAATGTAGGACTTCCAGGCTTTGCGCAGTAAGTTCACAATTTTATTTACAGTCTTTGTGTTTGTCCTTGTGACTTTCTTTATTAGATGATTGGAACTAGATATCTGAGTAACTTGTGG
ATTCTGAAACCTGTTGCAGGTGTATTTCAAACATGCGAGTGACGAAGAACGTGAACATGCTGAGAAATTGATGAGATACCAGGTTCGTTTTGTCTCCCGCCTTTCTTTTTAGCTCTTTGT
ATTATTTTCCTGGTAATTGACGGTTGACTGATTGGATTTACTCGATCTTTTGCATTTTGGGTTCATGTGCTACCCAGAAAACCAACGCGGAGGAAAAGTCAAGTTGCAATCAATTGTCAT
GCCTTTGATGGAGTTTGACCATCATGAGAAGGGAGATGCTCTTTATGGTCAGTAACTTTTCGGATTGACGCGCTTATTTGTGATCTTTACACGTCCCAGACTACTTGCTTCGTGTTTTGG
TGTCTGTATGTAACTACAATGTGCTGGTGACCTGCTCAGCTCTATGGAGTTAGCACTTGCGCTGGAGAAATTAACGAACGAGAAGCTTTTTCAGTTGCATCAGGTAAAATTTTAGTTTAG
ATTCTTGGATGCAGGTTCTCTTTTTTATATTCACACTCGAGCTTTATCGTAAAGCTATGGTAATTCCGTTATTTTAATAGAGTCAGCCATGATTATTATGCTTTACTAAACGATTATTAA
CAACGTCAGTATCCGTGACTTTGCCAGGCGCTGCCGCTGATGCCAATGATCATCAAATGACCGAGTTTATTGAAAGAGAGTTCCTCACAGAGCAGGTACTTTCACACTCTTAAACCTTCA
GAGTGTTGCGTGTTGCATCTCCGTTGAAATGACATCTTAAAAAATTTGCCTCTTTATCAATCTATTCGCTTTTCTAAGTAGTCGAATGTTGGTGATTGAAGGTGTCGAAGCAATTAAGAA
GGTGTCAGAATATGTCTCTCAGCTACGAAGAGTTGGGCAAGGACACGGTAAACTTCTTACTTTTGCTCAAGGATAAGTTTGTATACTGTTCTACTGTGGCTGATTGGGCAATAACAATGG
AATTATTCAAATTCTTGAAATTCCCTAATTTTATGTCGAATGTAATGCTAGCAATTGAATCTGGAAGCGTTTTCAGTCATTGTTAATATAATGCTTCACATAACCTTAAACTGGTCATTA
TTATAATCCTTTTGACCATGAATGTTAGCAGTAATCTATACAACATATTTGCTGGGCAGAACACATGTATCAGGTGTAACCATGGCATTACGTACAACGGATTTGATAGTGTTCCTTGTA
TGATCTGACCAATTCCCGCATTAGGCACCGTTCGTTGGCACCCCGATGCAGTGAGCGTGGCGAGAAGGGGCCGCTACCTTGTGCTTCATCGTGTGTTATTAATAGTTCATCATGATATTT
CTGCCAATGTTTTAATTTTTGTTGTGCAAGTGTGAGATCTGACAGCCTTTGGTCTGGCCTTGCTTATTACAGGTGTGTTTACCACTTCGATTTACAACTTCAGGAAGCATAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA