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Entry information : PpaGOX04 (Pp3c4_29460)
Entry ID 13910
Creation 2016-10-14 (Christophe Dunand)
Last sequence changes 2016-10-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-10-14 (Christophe Dunand)
Peroxidase information: PpaGOX04 (Pp3c4_29460)
Name (synonym) PpaGOX04 (Pp3c4_29460)
Class Glycolate Oxidase    [Orthogroup: GOX001]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaGOX04
start..stop		 S start..stop
BstrGOX03 532 0 3..373 1..370
AtGOX05 528 0 3..363 1..360
LeGOX08 526 0 5..366 4..364
HaGOX09 525 0 3..363 1..360
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13910' 'join(292..434,682..806,976..1022,1195..1272,1553..1677,1841..1910,2071..2133,2272..2341,2694..2794,3061..3165,3298..3489)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 292..434 141 N° 2 682..806 123 N° 3 976..1022 45 N° 4 1195..1272 76
N° 5 1553..1677 123 N° 6 1841..1910 68 N° 7 2071..2133 61 N° 8 2272..2341 68
N° 9 2694..2794 99 N° 10 3061..3165 103 N° 11 3298..3489 190  
join(292..434,682..806,976..1022,1195..1272,1553..1677,1841..1910,2071..2133,227 2..2341,2694..2794,3061..3165,3298..3489)


exon

Literature and cross-references PpaGOX04 (Pp3c4_29460)
Cluster/Prediction ref. Genebank:   5931647
Protein sequence: PpaGOX04 (Pp3c4_29460)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   372
PWM (Da):   %s   41100.66 Transmb domain:   %s   i27-49o
PI (pH):   %s   8.9
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSLEVVNVDEYELLAKAKMSKMAFDYFARGSEDQVSLRENREAFSRIRLRPRILVDVSNIDVATSVMGFKISMPIMVAPTAHHKLAHPEGELATARAASAADTLMILSSSANCSMEEVAA
TGPGVRFFQLYVYKDRNITITLVRRAEQFGFKAIVLTVDTPRLGRREADIKNRFKLPSHLVYKNLEGLMNLEQMDKSSHSELASWADSHFDRSLNWKDVEWLQSITHLPVLVKGILTAED
ASLALQAGVKGIIVSNHGARQLDHVPATISVLEEVVYAVRGRVPVFLDGGIRRGSDVFKALALGASGVFVGRPVPYALAVDGEAGATKVLQMLRDEFELTMALIGVRSVKEIRRQHVLTE
QDSMKLALISKL*

Retrieve as FASTA  
Remarks (Chromo 4, 10 introns)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTCTGGAGGTGGTCAATGTGGACGAGTATGAATTGTTGGCCAAGGCCAAGATGTCGAAGATGGCATTTGATTACTTTGCTCGCGGGAGCGAGGACCAAGTTTCCTTGAGAGAAAAT
CGGGAGGCATTCTCTCGAATAAGAGGTGCGACAAGCAGATCACTTTTCTTCAATTCTAGGCGCCCTAATATGTAAGCAGAAAAGGGAGTGCGAATTCCCCACGGCTTGAATCAGAGTATC
AATATTAGATGCAATCGAAAGACCGCTGTACATCGAGCATTTTCGCTAAATTGAGCGTCGATGTTCTTTTTCGGGTCATGGGAACCCTTCGTGCGCTAAGACTCTAATCGCATGTTTTAT
TTGTTGCTACAATTTCCGATTCAATTATGCAGGCTGAGGCCTCGGATTCTAGTGGATGTGAGCAACATAGATGTGGCAACGTCAGTAATGGGATTCAAGATCTCCATGCCTATAATGGTA
GCCCCAACCGCGCATCACAAATTGGCACATCCTGAAGAGGTACACCTTGACATACTTCGCCACACTAAGAACCGTGTTAGGGTTGTAGCAGGAATCTGATGCTTTAGCACCGACATACTA
CTGCGTGTGGAGAGTGCTAAGAGCATGAGTTCCAGCATTATTCACAGCGTAGAATTTACAGAATTTGGTGCATTTGTTTGTGTTGCAGGAGAGCTTGCAACCGCAAGAGCTGCTTCAGCA
GCTGATACTCTTATGTGGTCTTCCTCACAACCTCTTGAGATAATGAGAAGTTTCCTTCGGTTACTTCTTTAGTCTCTGAAGCTAGAAAATTTGAGATACTTGTTGAGGAATGATTAGATC
ATCAGTAGGCTACCACGAGCCATGATGCTAACAAAATTGCGGACTCTTGACGGATTTTGGTTTGCTCAGATTCTATCTTCTAGTGCTAATTGCAGCATGGAAGAAGTAGCTGCGACAGGC
CCAGGAGTCCGATTTTTCCAACTTTATATGTGAGTGGATGTTTACTTGATCACTTGTAGGCAGAGGTTGACATTTCGATATGGCTTACGTTGCGAAGGATTTGAAAATTAAAGCAGTAAT
TAACGCAGTTTTACTTCCTTCCACCCGTTTCGTTTCTGTTGATATTATGCTCGGATTTTGATTACATGTAGCGATTTAGGGTAACCTTCGAACCCATTTAGATTTTAGGCATTTGCAAGC
ACTACCCCTTTTCTGCCTGTATTGCATGGTTTCGGTATTAAATTGAGCTTGTGCCGTTTTGTATGAAAGGTGTATAAGGATAGGAACATCACCATAACTTTGGTGCGGAGGGCAGAGCAG
TTTGGCTTCAAAGCCATAGTTCTCACCGTTGATACTCCACGGCTGGGCCGCAGGGAAGCAGACATAAAAAATAGAGGTGAGTAATTCAGGGTCAAGTTAACCACAATGCCTACCTAAAAC
ACCAAAAAGCCAAGGAGAACACATGAAACCATGGGCTTGAAACATGGTGCAATGGAATGCTCTCAAGTAATGGAAAATTTTCGCTCCACGTTTGGAGGTCTTATTCTAGCTTGCTGCAGG
TTCAAATTGCCTTCCCACTTGGTATATAAGAATTTGGAAGGCCTCATGAATCTAGAGCAGATGGACAAGAGGTACATCCCAATCCACCTCCGGAGGTCTTTGTCTTTTTATTAATTCTGA
TTCATGACTTGATTATAGTTAGTCCATCTCCGAGCCCACACTCGTAACTGAAAAGTTCGGAGAAGGCCAAAGTCGTTACGACCTGAATTCGAATTTTTGTTTGTGTCTCAGTCAAGTCAT
TCCGAGCTGGCTTCTTGGGCAGACAGTCATTTTGACAGGTCTCTCAACTGGAAGAGGTATAAGCTGCCAACCCTGCTCCTCTTGAAATGATGTGTTTCAGGCTGCTAAAGACCAGACTGC
GCACTTTGTTAGGGCTCTACGATCAAACTTGACACGAGTCATGTTCTTAGTATCTGGTGAATTTTTCATTGCAGGACGTGGAGTGGTTGCAAAGCATTACGCATCTGCCTGTGCTTGTGA
AGGGTATTCTGACTGCTGAAGATGTGGTGAGAACAGAGTTACTCTCACTTATAAGTTTCTACAACGCTGTGTCGCTGCGATGATTTTGTGGCAAGGAGCTGAGCATTGAGATTTACAAAA
ATTATTCTTTAGTGACTTAGGGCGTGGAGCTTTTCTTCAACCATTTCCCTTACATACTTGTGGATGCAGACGAAATTATTGTGACTCGAGAGTATGTCAATGAATGGTGTAGTTGATTGT
CAGGGCACAGCTTGTAAATTATGATGCTTGCCTGTTTCACTTTTGTGTGGCTTAAGTACTTATATATAAAGCGTTGCTTTATTCATGTGAAAGTTGAGATGCCATGTCATGACTGACTTG
AAAACTTTTCGTGTGTAGCGAGTTTGGCACTACAAGCTGGAGTTAAAGGTATTATAGTATCCAACCATGGGGCTCGACAACTTGACCATGTACCGGCCACAATATCTGTTCTTGAAGAGA
GGTTGTTCAACTCTTCTTCTGCCTAATCTGAAAGACTTTTCCTGTATCCAAGAATCCCCAGTCTCTCGAAATGCATACATGATCATCCTGTGTTGTCAATTTCCAATATTTTTCTCCGCA
AACGACTTGAACCTATTGGAGTTCCCAGAGTGTCCGCATTCTATTCGCCTTGGGGAATGTGGAACATTGTGGATTACAACTGTAAGCTCTTCGAGGACCCGGCAGAGTTCAGTCTTGGTT
GTTGGTAATTGTGGCTCGGGAAAGCAGGTTGTGTACGCAGTCAGAGGGCGGGTCCCAGTGTTCTTGGATGGAGGCATCCGTCGTGGCTCAGACGTTTTCAAAGCTCTAGCACTCGGTGCA
TCCGGTGTTTTTTTGTAAGCCGCTGATGCACAACCTTTGAATAATGCAGCGGAGTGGAATGTTGCAAAACACAGTACCCCACAGGGACTAACAGTAACGAGTTCGAATTTGTCTACCGAC
ACCCCACATTCGCCTTTCTGATGCAGGTTGGAAGGCCCGTTCCATATGCGCTAGCTGTGGATGGCGAGGCTGGCGCGACGAAGGTGCTACAGATGCTGCGGGATGAGTTTGAGCTCACAA
TGGCACTCATTGGCGTTCGCTCGGTGAAGGAGATACGTCGCCAGCATGTCCTCACGGAGCAGGATTCCATGAAGCTGGCCCTCATTTCAAAGCTTTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTCTGGAGGTGGTCAATGTGGACGAGTATGAATTGTTGGCCAAGGCCAAGATGTCGAAGATGGCATTTGATTACTTTGCTCGCGGGAGCGAGGACCAAGTTTCCTTGAGAGAAAAT
CGGGAGGCATTCTCTCGAATAAGGCTGAGGCCTCGGATTCTAGTGGATGTGAGCAACATAGATGTGGCAACGTCAGTAATGGGATTCAAGATCTCCATGCCTATAATGGTAGCCCCAACC
GCGCATCACAAATTGGCACATCCTGAAGGAGAGCTTGCAACCGCAAGAGCTGCTTCAGCAGCTGATACTCTTATGATTCTATCTTCTAGTGCTAATTGCAGCATGGAAGAAGTAGCTGCG
ACAGGCCCAGGAGTCCGATTTTTCCAACTTTATGTGTATAAGGATAGGAACATCACCATAACTTTGGTGCGGAGGGCAGAGCAGTTTGGCTTCAAAGCCATAGTTCTCACCGTTGATACT
CCACGGCTGGGCCGCAGGGAAGCAGACATAAAAAATAGGTTCAAATTGCCTTCCCACTTGGTATATAAGAATTTGGAAGGCCTCATGAATCTAGAGCAGATGGACAAGTCAAGTCATTCC
GAGCTGGCTTCTTGGGCAGACAGTCATTTTGACAGGTCTCTCAACTGGAAGGACGTGGAGTGGTTGCAAAGCATTACGCATCTGCCTGTGCTTGTGAAGGGTATTCTGACTGCTGAAGAT
GCGAGTTTGGCACTACAAGCTGGAGTTAAAGGTATTATAGTATCCAACCATGGGGCTCGACAACTTGACCATGTACCGGCCACAATATCTGTTCTTGAAGAGGTTGTGTACGCAGTCAGA
GGGCGGGTCCCAGTGTTCTTGGATGGAGGCATCCGTCGTGGCTCAGACGTTTTCAAAGCTCTAGCACTCGGTGCATCCGGTGTTTTTGTTGGAAGGCCCGTTCCATATGCGCTAGCTGTG
GATGGCGAGGCTGGCGCGACGAAGGTGCTACAGATGCTGCGGGATGAGTTTGAGCTCACAATGGCACTCATTGGCGTTCGCTCGGTGAAGGAGATACGTCGCCAGCATGTCCTCACGGAG
CAGGATTCCATGAAGCTGGCCCTCATTTCAAAGCTTTGA

Retrieve as FASTA