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Entry information : PpaMDAR04 (Pp3c14_26470)
Entry ID 13925
Creation 2016-10-18 (Christophe Dunand)
Last sequence changes 2016-10-18 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-10-18 (Christophe Dunand)
Peroxidase information: PpaMDAR04 (Pp3c14_26470)
Name (synonym) PpaMDAR04 (Pp3c14_26470)
Class Monodhydroascorbate Reductase    [Orthogroup: MDAR002]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaMDAR04
start..stop		 S start..stop
MpalMDAR02 615 0 1..486 1..485
MpMDAR02 613 0 1..487 1..486
LeMDAR01 575 0 1..479 1..475
HaMDAR02 565 0 1..479 1..474
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 344089..344208 118 N° 2 343362..343413 50 N° 3 343116..343196 79 N° 4 342903..343021 117
N° 5 342493..342718 224 N° 6 342174..342292 117 N° 7 340943..341686 742  
complement(join(340943..341686,342174..342292,342493..342718,342903..343021,3431 16..343196,343362..343413,344089..344208))


exon

Literature and cross-references PpaMDAR04 (Pp3c14_26470)
Cluster/Prediction ref. Genebank:   5943214 Phytozome Gene 12:   32962836
Protein sequence: PpaMDAR04 (Pp3c14_26470)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   486
PWM (Da):   %s   52919.08 Transmb domain:   %s   o457-479i
PI (pH):   %s   8.25
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGRSFRVVILGGGTASGYAASEFVKHGLNPGDLCVISQEMVAPYERPALSKGYLLAKEPARLPAFHTCVGVGEQSHPAKWFQEKGIELVLGTRVTQANVRDKTLLTAAGETISYSILIVA
TGARVLKLDEFGVTGADAKNVCYLRDIKDATYLVDAMAECREKGGKAVVIGGGYIGMECAAALHGNRIPVTMVFPEDYCMPRLFTPEIARYYEDYYMKKGIQFRKGNVLSSFECDESDKV
TAVILKDGSRIDADIVVVGIGIRPNVDLFEGQLMLEKGGIKVNGKMQSVSNASVYAVGDVATFPMPMYSDVRRLEHVDHARKSAAHAVQAILMGNKVDNYDYLPYFYSRVFTLSWQFYGD
NVGDSVLFGDQIVGKFGAFWVHNGRLVGAFLEGGSKVEYAALAKAARERPHVKDISMLKKQGLDFALTVAEPTPQMSLMSSITSSESNLLFTHPSTWALQAGGGLALGLAVVGVIYWFGS
RRSRKL*

Retrieve as FASTA  
Remarks Complete sequence from genomic (Chromo 14, 5 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGGCGATCGTTCAGGGTGGTGATCCTCGGGGGCGGAACGGCGAGCGGATACGCAGCGTCGGAGTTCGTGAAGCATGGGTTGAATCCCGGGGATTTGTGTGTTATCTCGCAAGAAATG
GTGCGTCTGCCAGCAACTGCGTTTACAATTCAATTTGATTTGTCCCTTTTCCTCGTGATTTCGGGTGATTGAGACATGGATATGTTCGTTGAATTTCCGTGTGGATCTGGATCTTTATGA
TTTATTGCTTTAATAGCCATTCTTCGGTGTCTTTCTTGGAACAATCTTCAGCTCGTGACTATGTTGATTTTTATTTGGTTTTTTTTTTCCGGCGGTTGGGCTTTGAGTTCAAAAAAAAAA
ATTAAAAATTAAAAAAGTAAAAATTGGGTCGATCGATGTCTCATCTTTGCGCTGTCGCTCCTATTTCAGTTTTATGGTTCACACGAAAGTCGTTTTGTTCCTTTTACTGGTTATAGCTGT
CGAATTTCGTAGGTTTGGCTGATTTGGTCGCCTGTTTGGTCTAGTGGTCGTCCATTTTGCAACGATCGTTCGCTACGTGCAACTGAGTTAGTCGAGTTTACACTTGTATGTATACGCTCA
ACTAGGAATATTCAACACTGTCTAAATACTGGGGTTTTCGTGTAGTTGAAATGTCCGAATCCACAAGGGTCTGTCGAAGACCTGGAAATAGACTATGGACGCTGTCTGTGCGAGTCATGC
ATACTTTGGTAATATAAAAACTTATTTAGGGCAGAACTATTCCTGTGGCTAACATCTGGAAGATGGATCATGCAGGTGTTGCACCATATGAGCGCCCTGCTTTGAGTAAGGGATACTTGT
TAGCCAAAGGTACGTACATGGCAAGTATTATTTTCAGCTTTGCATCATCTAAGTTTGTATGTAATTTCAAATTAACTGTGATGTACTTTTTATTATTTCTTCCAAAAATAAATTATTGGA
GCATGTTTTGAGTATGGTGGCAAAATCAAGCGTTGGTTTGTGGTTGTGAAGCAGAAAACCTGCGCGGTTACCTGCTTTTCATACGTGTGTGGGTGTGGGGGAGCAATCGCATCCTGCTAA
ATGGTTTCAAGAAAAAGGTAATTCATCCTCCCTGCCATCGTATGCCGCCAGATGATTGCAACGATTTGGTAAGCTTAAGGAAGCTCACCCATCAACATCTTACGCTTGCAGGGGGATCGA
GTTGGTTTTGGGAACTCGCGTTACACAAGCAAATGTTAGAGATAAAACTCTTTTGACTGCTGCGGGTGAAACCATTTCGTACTCCATCCTGATTGTTGCAACGGGCGCTCGGGTACGGCC
CTATTTTCCCTGTACATAGGAAGTTAATTTGGGCTCATTTCTAAAGAGACATGATCTCCAAGTAGCACGTCCTTTATGTGGATTATTCACTGTTTAGATATACTCCTCGCTCGGGGCGTA
AGCCGGAAGTAGATTTTGAAATGTAATTGAGGTCTAAGATTTTCGGAATTAAGCAGGTGTTCTGAAGCTGGATGAGTTTGGGGTCACGGGAGCAGATGCAAAGAACGTTTGCTACCTTCG
AGACATCAAAGATGCGACGTATCTCGTGGATGCGATGGCAGAGTGTCGGGAGAAAGGCGGGAAGGCTGTTGTGATTGGCGGTGGCTACATTGGGATGGAGTGTGCCGCAGCCCTCCACGG
GAATCGTATTCCTGTGACCATGGTGTTCCCGGAAGATTACTGCAGTAAGAATCAATTGCCCCTAGTTTATCAGGGAAAATATGACGTGATTTCAACATTATCACTGCAGTATCCGAATTA
GTGAGAGTGGCTTCTGGTTTTTGAGAGACATTGAGGTGGAGTGGACTGTAGTTGGATGCGTGATGAGGTTGCCATTGGCATACCACGTCCAGAGTATTCTAAATGGACTTGGTGGTATTT
ACAGTGTGCCTCGCTTATTTACACCAGAGATTGCAAGATATTATGAAGATTACTACATGAAGAAGGGTATACAGTTTCGAAAAGGGAACGTCCTGTCTTCATTTGAGTGCGACGAATCGG
ACAAGGTATCATTTCGCCCATTAATAAAAAAACTGATGGTATTTATAACTCTTTTGGTAGCCAATCGATACGCGCTGTCGCCGTCATGTTTTATGTGGTGTTCGTACTAGGTAGTTGTCA
TGTTCGTACTATTATAAGTTTGTATCAGTCCAACGCATTGAACACCTCGTACCATATGCATGTGTCCTTCAAAGCTTAGGAATGACGTCTCCTCATGTGTACAGATATCTACATCTATGT
GTTAGATTTCTCCTTACCTCGTGCCATTGTAAGGATTTGTATCATGAGTTCGAAGAATGTCATGATGCCTCGGAATTTATTATCATTATTATTATTATTATTTTTGTAGGTGTCGCCTTA
GTACTAATCTGATGCTCATTTTGCTTACTGGTGCAATTGTGCCATGTCTGCCCTTTGGGATGGAATGTCTACCATCACCGAACCCATATTCTCACCCTAAAGCGGTGTTTACGATGTTTT
ACGATGTGCCAGGTGTGACTGCAGTCATACTGAAAGACGGAAGTCGAATAGACGCAGACATTGTGGTTGTGGGCATCGGTATACGCCCCAACGTGGACCTTTTTGAAGGGCAGCTCATGC
TGGAGAAAGGGGGCATCAAAGTGAATGGCAAAATGCAAAGTGTGAGCAATGCGTCCGTGTATGCAGTGGGAGACGTGGCGACCTTTCCCATGCCGATGTACAGCGATGTGAGGAGGCTGG
AGCATGTGGATCACGCTCGCAAGTCTGCAGCTCACGCTGTGCAGGCCATCCTGATGGGGAACAAAGTGGACAATTACGACTACCTTCCTTACTTCTACTCCCGGGTCTTCACGCTGTCGT
GGCAATTCTACGGCGACAACGTGGGTGATAGTGTGCTATTCGGTGACCAAATTGTAGGCAAGTTCGGGGCTTTCTGGGTGCACAATGGGAGATTGGTAGGGGCGTTTCTGGAGGGAGGGT
CCAAGGTAGAGTATGCGGCACTAGCCAAGGCAGCCAGAGAACGGCCACATGTAAAGGATATTAGTATGTTAAAGAAACAAGGTCTTGATTTTGCACTGACGGTAGCGGAGCCTACTCCAC
AGATGTCATTGATGAGTTCTATCACCTCGTCCGAGAGCAACCTCTTGTTCACCCACCCTTCGACGTGGGCGCTTCAAGCAGGTGGTGGCTTAGCCCTAGGATTGGCCGTTGTTGGGGTTA
TATACTGGTTTGGCAGCAGGAGATCCAGAAAACTGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGGCGATCGTTCAGGGTGGTGATCCTCGGGGGCGGAACGGCGAGCGGATACGCAGCGTCGGAGTTCGTGAAGCATGGGTTGAATCCCGGGGATTTGTGTGTTATCTCGCAAGAAATG
GTTGCACCATATGAGCGCCCTGCTTTGAGTAAGGGATACTTGTTAGCCAAAGAACCTGCGCGGTTACCTGCTTTTCATACGTGTGTGGGTGTGGGGGAGCAATCGCATCCTGCTAAATGG
TTTCAAGAAAAAGGGATCGAGTTGGTTTTGGGAACTCGCGTTACACAAGCAAATGTTAGAGATAAAACTCTTTTGACTGCTGCGGGTGAAACCATTTCGTACTCCATCCTGATTGTTGCA
ACGGGCGCTCGGGTTCTGAAGCTGGATGAGTTTGGGGTCACGGGAGCAGATGCAAAGAACGTTTGCTACCTTCGAGACATCAAAGATGCGACGTATCTCGTGGATGCGATGGCAGAGTGT
CGGGAGAAAGGCGGGAAGGCTGTTGTGATTGGCGGTGGCTACATTGGGATGGAGTGTGCCGCAGCCCTCCACGGGAATCGTATTCCTGTGACCATGGTGTTCCCGGAAGATTACTGCATG
CCTCGCTTATTTACACCAGAGATTGCAAGATATTATGAAGATTACTACATGAAGAAGGGTATACAGTTTCGAAAAGGGAACGTCCTGTCTTCATTTGAGTGCGACGAATCGGACAAGGTG
ACTGCAGTCATACTGAAAGACGGAAGTCGAATAGACGCAGACATTGTGGTTGTGGGCATCGGTATACGCCCCAACGTGGACCTTTTTGAAGGGCAGCTCATGCTGGAGAAAGGGGGCATC
AAAGTGAATGGCAAAATGCAAAGTGTGAGCAATGCGTCCGTGTATGCAGTGGGAGACGTGGCGACCTTTCCCATGCCGATGTACAGCGATGTGAGGAGGCTGGAGCATGTGGATCACGCT
CGCAAGTCTGCAGCTCACGCTGTGCAGGCCATCCTGATGGGGAACAAAGTGGACAATTACGACTACCTTCCTTACTTCTACTCCCGGGTCTTCACGCTGTCGTGGCAATTCTACGGCGAC
AACGTGGGTGATAGTGTGCTATTCGGTGACCAAATTGTAGGCAAGTTCGGGGCTTTCTGGGTGCACAATGGGAGATTGGTAGGGGCGTTTCTGGAGGGAGGGTCCAAGGTAGAGTATGCG
GCACTAGCCAAGGCAGCCAGAGAACGGCCACATGTAAAGGATATTAGTATGTTAAAGAAACAAGGTCTTGATTTTGCACTGACGGTAGCGGAGCCTACTCCACAGATGTCATTGATGAGT
TCTATCACCTCGTCCGAGAGCAACCTCTTGTTCACCCACCCTTCGACGTGGGCGCTTCAAGCAGGTGGTGGCTTAGCCCTAGGATTGGCCGTTGTTGGGGTTATATACTGGTTTGGCAGC
AGGAGATCCAGAAAACTGTGA

Retrieve as FASTA