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Entry information : CbraPC01 (g18572/ CHBRA21g00180)
Entry ID 14062
Creation 2016-10-26 (Christophe Dunand)
Last sequence changes 2016-10-26 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-10-26 (Christophe Dunand)
Peroxidase information: CbraPC01 (g18572/ CHBRA21g00180)
Name (synonym) CbraPC01 (g18572/ CHBRA21g00180)
Class Plastocyanin    [Orthogroup: PC001]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara
Organism Chara braunii    [TaxId: 69332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbraPC01
start..stop		 S start..stop
AtPC02 129 5.88e-39 7..166 6..172
ThasPC02 115 2.27e-33 3..165 2..170
ThasPC01 113 1.21e-32 3..165 2..168
PpaPC02 112 1.52e-32 1..166 1..167
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14062' 'join(1157648..1158145)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1157648..1158145 496  
join(1157648..1158145)


exon

Literature and cross-references CbraPC01 (g18572/ CHBRA21g00180)
Protein sequence: CbraPC01 (g18572/ CHBRA21g00180)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   165 (160)
PWM (Da):   %s   16697.4 (17571.8)  
PI (pH):   %s   6.09 (8.80) Peptide Signal:   %s   cut: 22 range:22-181
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASTAAAAQV AVPSCTGLRV SSSSAKVSSA KSTAVSVKSV APRASLEAAK KVAGNALVAT GASLLLAFGA HADTVISMGT ADGQLLFDPA AVTVAAGEKI TFKNVGGFPH NIVFDEGPGN 
VDALSHDDLF NAAGEEYSIT LTEKGNYEYY CEPHSGVMRG KITVS* 

Retrieve as FASTA  
Remarks No intron
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGTCCA CAGCTGCTGC TGCGCAGGTC GCCGTGCCAT CGTGCACGGG CCTGAGGGTA TCCTCGTCTT CCGCGAAGGT GTCGTCGGCG AAATCGACGG CCGTCTCCGT CAAGTCGGTC  GCTCCGCGAG CGTCGCTGGA GGCGGCGAAG AAGGTGGCCG GGAATGCGCT GGTGGCCACA GGCGCCAGCT TGCTTCTGGC TTTCGGCGCG CACGCTGACA CTGTCATTTC CATGGGAACT  GCTGATGGGC AACTGTTGTT TGATCCTGCC GCAGTGACGG TGGCTGCAGG TGAGAAGATC ACGTTCAAAA ACGTAGGCGG CTTTCCCCAC AACATCGTGT TCGATGAGGG CCCTGGTAAT  GTGGACGCGC TCAGCCACGA TGATCTCTTC AACGCGGCAG GCGAAGAATA CTCCATCACG CTCACGGAGA AGGGAAACTA TGAGTACTAC TGCGAACCTC ACTCCGGCGT CATGAGGGGT 
AAGATCACCG TCAGCTAG 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGTCCA CAGCTGCTGC TGCGCAGGTC GCCGTGCCAT CGTGCACGGG CCTGAGGGTA TCCTCGTCTT CCGCGAAGGT GTCGTCGGCG AAATCGACGG CCGTCTCCGT CAAGTCGGTC  GCTCCGCGAG CGTCGCTGGA GGCGGCGAAG AAGGTGGCCG GGAATGCGCT GGTGGCCACA GGCGCCAGCT TGCTTCTGGC TTTCGGCGCG CACGCTGACA CTGTCATTTC CATGGGAACT  GCTGATGGGC AACTGTTGTT TGATCCTGCC GCAGTGACGG TGGCTGCAGG TGAGAAGATC ACGTTCAAAA ACGTAGGCGG CTTTCCCCAC AACATCGTGT TCGATGAGGG CCCTGGTAAT  GTGGACGCGC TCAGCCACGA TGATCTCTTC AACGCGGCAG GCGAAGAATA CTCCATCACG CTCACGGAGA AGGGAAACTA TGAGTACTAC TGCGAACCTC ACTCCGGCGT CATGAGGGGT 
AAGATCACCG TCAGCTAG 

Retrieve as FASTA