Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
347 (318) |
PWM (Da): |
38047.58 (35509.7) |
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PI (pH): |
9.33 (8.20) |
Peptide Signal: |
cut: 28 range:28-345 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MVISFLSTLP SLISHPTISS KPAIFPKNSN GSSILCQRSS KEDTSREKYN RRDVLKSFGT AISIEILAGS ATPFTSAANA ADLIQKRQRS VFLSSIKETL GNTVKEHQDL IPSILILALN
DAMTYDKSTK SGGSNGSIRF SSELSRPENS GLSDALAILE KSKQEIDMYS KGGPLSYSDL IQLAAQSAVK STFLSSAIKK CGGNEEKGKT LYRAYGSTGQ WGLFERQFGR NDTQEPDPEG
RVPKWSKASV EEMKNKFSAV GFGPRQLAVM SAFLGPDQMA TESLLQSDPE VKPWVEKYQR SRETVSQTDY EVDLITTITK LSCLGQKINY EAYTYPIKKI ELSKLKL
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic. Incorrect prediction from Phytozome (bad splicing) |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGTAATCT CCTTCCTCTC CACTCTCCCT TCTTTGATAT CTCATCCCAC CATCTCTTCT AAACCTGCAA TATTTCCAAA GAATTCCAAT GTAAGTAACC TCTCAAACTC TATTAAATTT
GTCGCTTGAT TGAAAATTTG CTATTACCAG GGAAGCAGCA TTCTCTGTCA GAGAAGCAGC AAAGAAGATA CCAGTAGAGA AAAGTATAAT AGACGTGATG TTCTCAAGTC TTTCGGAACT
GCTATAAGTA TAGTATGTGA TTTTTTTTAA CACTAACTTG GGACTCAGTA ATTAGTGTTT GATAATTTCT CCTCTTTTTC CTTTTCTTTT GTGCAGGAAA TTCTTGCAGG TTCTGCCACT
CCATTTACAA GTGCAGCTAA TGCTGCAGAT TTAATTCAGA AGAGACAACG TTCTGTCTTC TTATGTGAGT TCCAAAATAT CCTCCTTCAC CATAATTATA ATCACAATCA CAATTACAAT
CCTCATTTTT CTTTCTTTTT GCAGCAAGTA TTAAAGAAAC TCTTGGGAAT ACTGTTAAGG TAATTCAGAG AAAGGGTTTT GTGTGAATAC TATTTTTACT CACTGTGTTC TTAGTTTTAA
CTTTTAATCT GATTTTATGC TTTACCTACT TCAAATTTAC CCAATGATAT ATTAGATGAG ATTAACCCTC TTCTTAGTTT TATTTTGATT TTCTTGCATA TTTGAATTTT GAAAGGAACA
TCAAGATCTG ATCCCATCGA TACTAATACT GGCATTAAAT GATGCCATGA CATATGACAA GGTCAGTACA TCAGGATTTA TAGATTTTTA CTTACAACAA TAAAACTGCA TGTGTGATTT
CAAATTTCTG TAAAAATTGC AGAGCACAAA ATCTGGGGGA TCAAACGGTT CCATTCGATT TAGGTACCAT TCTTTAGATT TCGAAGGAAA CATTATTGCA TAATGCAGAT AGACAGATAA
TTTTCTTCTT CTTCTTCTGA ATTTCTTATT TTTTCATGGT AAAAGCTCTG AGTTGAGCAG ACCGGAAAAC AGTGGTCTTT CTGATGCTTT GGCAATCTTA GAGAAATCGA AACAGGAAAT
CGATATGTAT TCTAAAGGAG GACCTCTGTC GTATTCTGAT CTCATTCAGT TAGCAGGTTC GACGAGATGC AATTCTGAAT TGATATTTTA TTTTATTTCA TTGTCATTTT CTTTTTGAAT
TGTTCTCAAA TTGAGCATTC TCTGTTAATT GCAGCCCAGT CAGCTGTGAA GAGCACATTC TTGAGTTCCG CCATTAAAAA ATGTGGTGGG AATGAAGAAA AGGGGAAAAC ATTGTATAGA
GCATATGGTT CAACTGGTCA GGTTTGTTAT AAGAATTAAT ACAATGGAAA GATTGTTTTT TAAACAAAAA AATAATATTG GTAACTAAAC AAACAAACAG TGGGGATTAT TTGAAAGACA
ATTCGGTCGT AACGATACAC AAGAACCCGA TCCTGAAGGC AGAGTCCCCA AATGGAGCAA GGCTTCTGTT GAGGAAATGA AGAACAAATT CTCTGCTGTT GGTTTCGGAC CACGGCAGTT
GGCTGTCATG TCTGCATTCC TTGGCCCAGA TCAAATGGCT ACAGAAAGCT TATTACAATC TGACCCTGAG GTTAAACCTT GGGTTGAGAA ATATCAAAGA AGTCGCGAAA CTGTCTCTCA
AACTGATTAT GAGGTGGGGA AAAACTTATG TTGATTGATC TTGAAGGAAT CCTTGTTTCT TTTTCTGATA TTTCCTTCTT TTGTTGCTGC AGGTTGATCT GATAACAACT ATCACAAAGC
TAAGCTGTCT TGGTCAGAAA ATTAACTATG AAGCATATAC ATATCCAATC AAGAAAATTG AGTTGAGTAA ACTCAAACTG TAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGTAATCT CCTTCCTCTC CACTCTCCCT TCTTTGATAT CTCATCCCAC CATCTCTTCT AAACCTGCAA TATTTCCAAA GAATTCCAAT GGAAGCAGCA TTCTCTGTCA GAGAAGCAGC
AAAGAAGATA CCAGTAGAGA AAAGTATAAT AGACGTGATG TTCTCAAGTC TTTCGGAACT GCTATAAGTA TAGAAATTCT TGCAGGTTCT GCCACTCCAT TTACAAGTGC AGCTAATGCT
GCAGATTTAA TTCAGAAGAG ACAACGTTCT GTCTTCTTAT CAAGTATTAA AGAAACTCTT GGGAATACTG TTAAGGAACA TCAAGATCTG ATCCCATCGA TACTAATACT GGCATTAAAT
GATGCCATGA CATATGACAA GAGCACAAAA TCTGGGGGAT CAAACGGTTC CATTCGATTT AGCTCTGAGT TGAGCAGACC GGAAAACAGT GGTCTTTCTG ATGCTTTGGC AATCTTAGAG
AAATCGAAAC AGGAAATCGA TATGTATTCT AAAGGAGGAC CTCTGTCGTA TTCTGATCTC ATTCAGTTAG CAGCCCAGTC AGCTGTGAAG AGCACATTCT TGAGTTCCGC CATTAAAAAA
TGTGGTGGGA ATGAAGAAAA GGGGAAAACA TTGTATAGAG CATATGGTTC AACTGGTCAG TGGGGATTAT TTGAAAGACA ATTCGGTCGT AACGATACAC AAGAACCCGA TCCTGAAGGC
AGAGTCCCCA AATGGAGCAA GGCTTCTGTT GAGGAAATGA AGAACAAATT CTCTGCTGTT GGTTTCGGAC CACGGCAGTT GGCTGTCATG TCTGCATTCC TTGGCCCAGA TCAAATGGCT
ACAGAAAGCT TATTACAATC TGACCCTGAG GTTAAACCTT GGGTTGAGAA ATATCAAAGA AGTCGCGAAA CTGTCTCTCA AACTGATTAT GAGGTTGATC TGATAACAAC TATCACAAAG
CTAAGCTGTC TTGGTCAGAA AATTAACTAT GAAGCATATA CATATCCAAT CAAGAAAATT GAGTTGAGTA AACTCAAACT GTAA
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Retrieve as FASTA
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