1. Browse the Database
  2. View Redoxidase
Entry information : HaTrx03 (HanXRQChr09g0246861)
Entry ID 14491
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2018-03-08 (Christophe Dunand)
Peroxidase information: HaTrx03 (HanXRQChr09g0246861)
Name (synonym) HaTrx03 (HanXRQChr09g0246861)
Class Other Thioredoxin    [Orthogroup: Trx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaTrx03
start..stop		 S start..stop
AtTrx07 189 1.27e-61 82..199 72..189
ThasTrx07 181 1.62e-58 65..198 55..187
AtTrx08 147 9.09e-45 81..197 91..207
PpaTrx06 145 2.41e-44 83..197 79..189
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14491' 'join(64390329..64390672,64391528..64391602,64391690..64391756,64391875..64391892,64391975..64392079)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 64390329..64390672 342 N° 2 64391528..64391602 73 N° 3 64391690..64391756 65 N° 4 64391875..64391892 16
N° 5 64391975..64392079 103  
join(64390329..64390672,64391528..64391602,64391690..64391756,64391875..64391892 ,64391975..64392079)


exon

Literature and cross-references HaTrx03 (HanXRQChr09g0246861)
DNA ref. HanXRQ genome:   HanXRQChr09 (64390329..64392079)
Protein sequence: HaTrx03 (HanXRQChr09g0246861)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   202
PWM (Da):   %s   22660.67 Transmb domain:   %s   o431-450i
PI (pH):   %s   8.72
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRNIPLGLLPQQLRSTPAAAMTDATTLPFQTLHLPSNRLAFSNSGSSSRSLSDFWRFKYDVCTGSLKALSQQRSIPVIDSSSPVSLDLKPILNECQFDHVIHDAQRLDDSVVVLWMAKWC
RKCIYLKPTLEKLAADYHPRVKFYCIDVNNVPYQLVVRAGVKMPTIQLWKDGKKQAEVIGGHKAYLVANEVREMIDDEGQP*

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGTAACATTCCACTTGGTCTTCTTCCTCAACAACTCCGATCTACACCAGCTGCCGCCATGACCGACGCTACCACACTACCTTTTCAAACACTACATCTTCCATCCAATCGTCTTGCG
TTTTCAAATTCCGGATCTTCTTCAAGGTCCCTTTCAGATTTTTGGAGATTCAAATATGACGTATGCACAGGGAGTTTGAAGGCCTTGAGCCAGCAAAGATCGATTCCGGTTATTGATTCT
TCTTCCCCTGTTTCACTCGACCTCAAACCTATTTTAAACGAATGCCAATTTGATCACGTCATTCATGATGCTCAACGGTTGGATGACTCGGTTGTTGTTTTGTGTGGTATGTTTACTGCT
TTAGATTGTTGCAAAATATGTATTTGTTATTATTATGAATATGTATATGATGATTAACATGGGTTTGTATTCTAATTTCATGCTGATACTTTATGTGTTAGGCTTTGTGTTTAGTAGAAT
CGGTTTTGCTATTCAAAAGAGGCTTATTACCTAGGGCTCTAAACGAACCGAATGTTCAGCGAACAGTTCGTGAACTGTTCGGCGGGAAGTTGGTGAAAATGAACAAGAAATTCCGTTCGA
TTAGTTAAATGAACGAACACGAACAACTGTCTCGTTCGTTCAATTGCGTTCATGAATGTTCGGTAACGTGTTCGTAAACATTCGTTCATGTTCGTTTGTTTATGTTCATTAAATATTTTT
TTAGCATTTATTTATTTTATCTAAATCTTTTATATTCCTTAATTCTTATTTATCTCATTACCCAAACAAATAAAATAGGAAACCCTACCTCCACCTTTCTTTCTTATTATTCACATCGAA
AAATACAATTGAACTTCGTCGATTTTATCTGTGTTCGTGAACCGTTCATGAACATGTTCATTTCCTTAACAAACGAACACGAACAAAAAATCTCGTTCGGTAAGTGTTCATGAACTGTTC
GTGAACACATAATATTCTTAACGAACGAACACGAACAAGGCCTTGTTCGAGTTCGTTCGGTTCGTTTACAACCCTGGCTGCCTGCCACTATATTGTAATGGCCACCAGTTTCTTAATTTT
CATCATATTATACAATTTCTATTCAGGATCTTAATCTTATTGCCACATATCAATATTTGATGGGATATGGATCATGTTTAGCCAGAATTATTAGGTGAGCTAATGTTATTTGTGTTCATA
GGATGGCAAAGTGGTGCAGGAAATGCATATATTTGAAACCAACATTGGAAAAATTGGCAGCTGATTATCACCCAAGAGGTTAAAACTTAAAACTCGCCCTTTTGCTCAACTATCGCGATG
TTCACATTTCTCATACTTACTTGTGTTTGGATATGTTAAAAGCAGGGTAAAGTTTTACTGCATTGATGTCAACAACGTCCCGTATCAGCTTGTGGTTCGGGCTGGGGTCACTCTGTAAGT
CTCTCATGCCCGCACAATTAGTTCAGTTTATCATTTTCAGACGTTAACACTTGAATTGTGCAATTTCATGTCATTTGACTCATTTGGGATCGGATGTGCTCTATAATCACAGAAAATGCC
AACTATACAGAGGTGCACAGATTTATCTAACAATATTTTTATTATGTTTGCTAGCTGTTGCTACCTTCGAAACTAATGTGTTTTGGTATTCCAGCTATGGAAAGATGGGAAGAAACAAGC
AGAGGTGATCGGAGGTCACAAAGCGTATTTAGTTGCTAACGAGGTTCGTGAAATGATAGATGATGAAGGGCAACCTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGTAACATTCCACTTGGTCTTCTTCCTCAACAACTCCGATCTACACCAGCTGCCGCCATGACCGACGCTACCACACTACCTTTTCAAACACTACATCTTCCATCCAATCGTCTTGCG
TTTTCAAATTCCGGATCTTCTTCAAGGTCCCTTTCAGATTTTTGGAGATTCAAATATGACGTATGCACAGGGAGTTTGAAGGCCTTGAGCCAGCAAAGATCGATTCCGGTTATTGATTCT
TCTTCCCCTGTTTCACTCGACCTCAAACCTATTTTAAACGAATGCCAATTTGATCACGTCATTCATGATGCTCAACGGTTGGATGACTCGGTTGTTGTTTTGTGGATGGCAAAGTGGTGC
AGGAAATGCATATATTTGAAACCAACATTGGAAAAATTGGCAGCTGATTATCACCCAAGGGTAAAGTTTTACTGCATTGATGTCAACAACGTCCCGTATCAGCTTGTGGTTCGGGCTGGG
GTCACTAAAATGCCAACTATACAGCTATGGAAAGATGGGAAGAAACAAGCAGAGGTGATCGGAGGTCACAAAGCGTATTTAGTTGCTAACGAGGTTCGTGAAATGATAGATGATGAAGGG
CAACCTTAA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTTTAGGGAT ATAAAAGTAA AAGTTTGTCC TGTAAATGCG TAACATTCCA CTTGGTCTTC TTCCTCAACA ACTCCGATCT ACACCAGCTG CCGCCATGAC CGACGCTACC ACACTACCTT  TTCAAACACT ACATCTTCCA TCCAATCGTC TTGCGTTTTC AAATTCCGGA TCTTCTTCAA GGTCCCTTTC AGATTTTTGG AGATTCAAAT ATGACGTATG CACAGGGAGT TTGAAGGCCT  TGAGCCAGCA AAGATCGATT CCGGTTATTG ATTCTTCTTC CCCTGTTTCA CTCGACCTCA AACCTATTTT AAACGAATGC CAATTTGATC ACGTCATTCA TGATGCTCAA CGGTTGGATG  ACTCGGTTGT TGTTTTGTGG ATGGCAAAGT GGTGCAGGAA ATGCATATAT TTGAAACCAA CATTGGAAAA ATTGGCAGCT GATTATCACC CAAGGGTAAA GTTTTACTGC ATTGATGTCA  ACAACGTCCC GTATCAGCTT GTGGTTCGGG CTGGGGTCAC TAAAATGCCA ACTATACAGC TATGGAAAGA TGGGAAGAAA CAAGCAGAGG TGATCGGAGG TCACAAAGCG TATTTAGTTG  CTAACGAGGT TCGTGAAATG ATAGATGATG AAGGGCAACC TTAATTTCTT TCTACATATG TTCTTGTTTT TTGTTCTTCT AGAAATGGAC ACATAGATTT GTATATACTG CAGAGAATAA  GCAATAAACT GTTTTTTTTT TTTTTTTTTT TTGCCATATA ATCCCTAATC TGTTGTTTTG GTATCACTTT GTAATTGTAA CCATCATGCA ACAATGCATA CTCTGAAAGC TCATCGTTTT  CGACCATGTG TAAAAACTAT CCGTTACTCA TAAAGAAGAA ATATTTGTTT GTTTTTCCTC ATTTCTTTTT CTCTTCGATG GATGGATGAC CGGATAAAGG ATGTTACGGA CCAATAAGTT 
ATGGAATGAT ATTGTTTGGG CTCTCGT 

Retrieve as FASTA