View Redoxidase 14510

Entry information : HaTrxM05HanXRQChr11g0331381

Entry ID	14510
Creation	2017-11-03 (Christophe Dunand)
Last sequence changes	2017-11-03 (Christophe Dunand)
Sequence status	N/D
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaTrxM05HanXRQChr11g0331381

Name

HaTrxM05HanXRQChr11g0331381

Class

Thioredoxin Type M [Orthogroup: TrxM004]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaTrxM05 start..stop	S start..stop
AtTrxM03	174	1.74e-56	58..167	64..174
HaTrxM07	171	2.35e-55	7..167	17..161
ThasTrxM03	168	5.52e-54	62..167	77..182
HaTrxM06	131	8.2e-40	5..165	13..163

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14510' 'join(49274271..49274454,49275761..49276086)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	49274271..49274454	182	N° 2	49275761..49276086	324
join(49274271..49274454,49275761..49276086)

Literature and cross-references HaTrxM05HanXRQChr11g0331381

DNA ref.	HanXRQ genome: HanXRQChr11 (49274271..49276086)

Protein sequence: HaTrxM05HanXRQChr11g0331381

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	169
PWM (Da):	18440.31
PI (pH):	8.62

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MANSSSSVLPSSSSSSHLNTQFALRSSLFASPLHNNNGFSFRPIKTKSPVRVLSMQQRPSKATVVTGQSWNTSVLESKTPVLVEFYASWCGPCQMVHRVIDEIAAEYAGKVNCYVLNADK
DPRITEEYDIKAVPIVVLFKNGEKCESVVGTMPKEFYVAAIERVLSSSS

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCGAATTCATCTTCTTCTGTTTTACCTTCTTCTTCTTCTTCTTCTCATCTTAACACCCAATTCGCATTACGATCTTCACTGTTTGCATCCCCTCTGCACAATAATAATGGCTTCTCG
TTCCGTCCGATCAAAACCAAATCACCTGTTCGAGTCCTCTCTATGCAACAACGCCCATCTAAAGAGGTACTTTTCATTTCTATGTTTAATAACATCTTATTGCGCCAGTTTTTTTATGGT
TTATTGGCGGGATCGTATTTTATTAAGATTTCCTGAATCAGAGTGGGATCGAATCGAATTAGGGATTTTGTTTCCTAAAGTGATTAGTGATTTTTGTTTAGTATTTTGTTCCTTTTGAGT
GTATGATTTGATAATTAATATGAAGATTTTATTGTTTATGTGGGCCAATTAATTGTGGTTTTAGCATGATTTTGTTATTGGTGATCGATCATATTTTTATTAGAGGGTTTTCTTGTTTTT
TATTTTGCTAACTTGATAAGCATTGGTAGAATGTAGTTGACATTTATGACATTAAGGTCCAAGTTATTTAATATTTTGTGCATTTTGTGGTTACTCTTTATAGGCTGCTAAATAAAGAAA
TAGCTCTACTTTCTTTATTTGGATTAAAGAAGCAAATCCACAAAACTATGGAAACTTTGTCAACAAATGTAATCTCTTAATTAGCTTTAACTAGAGAGAAAGCTTTCTATCCATGGCATT
ATAGCCTAGTGGCATCTTGGGATGGGATAAGGTTTTGGGACCATTAGGTCCTTGGTTCGATTCTCACAAAGGGGGATTTTTCCCAGATTTATTGGGTTTCCTCCTGAATTGGTGTATAGG
CATTATAGCCTAGTGGAGATGGATATGATCGGGTGGTTCTGCTGGTGGCACGATGATACTCCAGTGGTCCGCCAGTGATCCTAATTTGCCGTTAAAAAAGAGAGAAAACTGTCTGTGGGA
TGTAAAGATCAATGATGTGAGAAAATGATCAAAAAGGGTGTTTGGATTTATATTTTGAAACTGATTATTGCACCATTAAGAACTAGTTAATGTATAATCTGATTATTTCTTACATGTGAG
CCTCCGAATCTGGTTATTTTGACCCCTAAATAATCAGAAAACCGTGATTACCCCCAATTACTTACAACTGATGAAATGCACATCCAAACCCTCTCCGTGTTTAGTTATAGAGGTTACACA
TTATTCCCCTTGAATTGGTTAATAATAGGCTGATCTTGTTTAAGAAAGCACATACTTCAGATATAATCTTGCGGTGGGTGGGATTATGTAACCCCATCCATATTCCTGGAGATTTTATTC
AGATTAGAAAATTTGTTTAGTTTAGTTATATCGGATGCCATTTTTTTGAAACACAAAACCGTATGTGATGCACTGTGAGCCGTTTGACTTTGACCGTTAAGGCCTAATTGCTTCGTTTCT
ATGATTATGAAATAAGCTGATCATGCGCTTCTATTTACATCTATAATTACAGCAACAGTGGTGACGGGGCAGTCATGGAACACATCAGTTCTCGAAAGCAAAACCCCAGTACTAGTTGAG
TTCTATGCCAGCTGGTGTGGACCATGCCAAATGGTGCACCGTGTGATCGATGAGATTGCAGCCGAATATGCAGGGAAGGTGAACTGTTACGTGCTAAACGCTGACAAGGACCCACGAATC
ACAGAGGAATACGACATCAAAGCGGTCCCAATAGTGGTTTTGTTCAAGAACGGTGAGAAGTGTGAGTCAGTGGTTGGGACCATGCCTAAAGAGTTCTATGTGGCTGCCATTGAAAGGGTC
TTGTCGTCTTCGTCTTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

AATAGACCTC ATCTGTTTTG TTCTCCAGCT TCACTCTCAA CTCTCATTTT CAATAATAAT AATATCCACG TCATCACCCA TCAGATCTCT CTGATCAATC AATTCTTCCC TCAAACTCTT TGTTTACAAA TGGCGAATTC ATCTTCTTCT GTTTTACCTT CTTCTTCTTC TTCTTCTCAT CTTAACACCC AATTCGCATT ACGATCTTCA CTGTTTGCAT CCCCTCTGCA CAATAATAAT GGCTTCTCGT TCCGTCCGAT CAAAACCAAA TCACCTGTTC GAGTCCTCTC TATGCAACAA CGCCCATCTA AAGCAACAGT GGTGACGGGG CAGTCATGGA ACACATCAGT TCTCGAAAGC AAAACCCCAG TACTAGTTGA GTTCTATGCC AGCTGGTGTG GACCATGCCA AATGGTGCAC CGTGTGATCG ATGAGATTGC AGCCGAATAT GCAGGGAAGG TGAACTGTTA CGTGCTAAAC GCTGACAAGG ACCCACGAAT CACAGAGGAA TACGACATCA AAGCGGTCCC AATAGTGGTT TTGTTCAAGA ACGGTGAGAA GTGTGAGTCA GTGGTTGGGA CCATGCCTAA AGAGTTCTAT GTGGCTGCCA TTGAAAGGGT CTTGTCGTCT TCGTCTTGAA CTTTTTAAGG GGGTGTGTAA AGTTGTTTAG GTGGTTTGTG CTAGCTTCGT TTTCTGCTTA AATCTGAATT TGGACGATTT TCTCATTGGC GGTTTAGGGT TGATAAGCGT TGATACAGAA ACGGTTTATT TTGCGACTAC AGTCGATGTG ACAAACTCAG GTTGGGGGTT GTGTTCTTAT AGAAAAATAA GGGTTATCAT CTTTTAAAAT TTACATCATG AGTTGTTTTC TTTGTCAATG GTATGAAAAC ATTTCAGTTG CCACTTGCCA GTCTTTTTAA TATATTTTTT TATAGGAAAA ATTACAAGTT TATTGTTTGT TTCTTCATCA ACTGATGCGC CTGGAACCGA GCAATCCAAG TTTATTCCAT CAAATCATGT CAGATGATAC CCGTCTCAAT AAAACACCGC CGTATGAAGA CATCGAAATC AAGCGTTTTC ATCTTTCTTT AGATCCGTAT CTCATATTCG TATGAAGAAC CCGAACAAAC TGTACATAAA CGTCTACCCG TTTTGTTTTC CTCATACAAC CGGCTCAGCA TCTCTTTTTT CTGTACGATA AATGATCAAA CCCACGTGTG CACCTGTTCA AGTTGGGACG GGACACCTGT GATAGCCTTA GCGGCCACCA ACACAACCGA ACCAAGTGAC GATTCTTCTT CGAACCCATG CTTAGGTGGA ATTATGTAAA AAAGAACCTT GTATGGCAAC ACGTTAATTT GTTTAGCAAC CGGCAGCGAC CAAAAACTTC TTCTTGCTTA CCGGTTCTTC AAGAACCACA ACGACATCAT CCACCTTTTC AAACAACTCC TCCAATTCAC TCACACCAAA CCTTTGAAAA TCCAACGCTC GTTTATACCT TTGCTGATAA ATCGCCTCAA AATACCCCAA AGATATCGTA CACGAATAAC TCACTAAAAT CTCCTGAAGC TCAAACCTAA ACTTATCTAA ACTTTCATCT TGATCTTCCA AAACTACCCT TTCTTCATCC GAGAAGTCAT CACACGTATT CTCGTCCCGT ATACCCTTGC CTTTTCTATC AATCTTTTCC GCAACCGAAG TGGTCCCCGC TAAACATTTC CTAAGATATA CAAACTTCCT TTGTCCCTTA CCTTCAACGG CTATTTTATC ACTCATTTTT CTCAAAAGAT TTACGAGTTT CAACGTCCCG TATTCCGAAA CGTAAAGCGG TCTCCCGAAA CTTCTCTGGT ATTCAGCGGG AAGACGTGCA AGCTCCAAAC AACCGTTGAA ACATTCTAGA AGCTTAACGA GTTGACCCTT TAAGCCGGTC AAATCTCCAG GCTGGACCCA CGTTATATCG TTGTTTAAAC CGCATGGAAG ACTATAAGAC CTTGATGTTG TTGAAAAATC TTTGGAACTA TAGTAGGTTC GAGATATTCC TCTATAAACA ATCGCTTCTT CTTCGTTTTG AACATCTGAG CTGTCGGTTA TCTGACAGCT CATCAGTAAG CTCGCCATGT CAGCAGGACC CATACCGGTC CCACGAGCCG GAACAAACCC TTCTCCACGA ACAACACTAG GCCAGTCCCA AACGAAACTA CCAGCGTTAC TCAACGCAGA CGAAACACCA ACACCGGACG GAATCACGAG AATTACGGTA TACCCGCGTT GACCAAGTAT GTGAAGTGCG GGAGAAAAGT CAACATCACC GGAAATCAGC ATGATTGTAG ACGGTGGGGG ATTATCGAGA GCAAAAAGAA ACATGTCGAC TAATATCGCT TTATCCGCAG CATCTTTTCT GCCGTTCGGT ACGTCTATGA GCTTGACACC TGTCCTTTGG CATCCTTCTC TGAGACGTCT AGGAAAGCCG TTGAAATCCC CGTAAGCGGA GAACATTGTT ACGGCACCGG TAATTATCGG GTGGACCCGT AAGGCCATTC GGATGTTACT GGCCACATCT TCTGGCCGTA TGTCGCTAGG AACGGGACAG TTTTCCATGT CCCAGAGTAT GGCAATCGAC CCGTCTGACC CGTTACGGTT TTGTTGAGGT GAGCTTGTGT TTTGGATGGA CAGTTGTGTT TGTTCCATGG ATCCTGAAGA TAATATCAAC GTTGATGCGT TTGTGCCGGC CATCAGTAGA TAACAAAAGC TTCAAGGGAC CTGTTGATTT AAAAAAAAAT ATTTTTTTTT GTTATCCCTC TCAAATTTCA TATAGTGTCA ACCTATAATA TCCGAGTTCT ACGCATAAGC AAAACCACAA ATGCTACTTA AAATGCCCTA GAATAATAAT CTAAGTGCAC CACAATCCTA CTCGAGTACC TGACAGATAA CTTGAAGCGA TCACCGTTAA CAATCAATCA TTTTTCAAAG TTCAAATTAC AGTAGGAACG CGAGAAGGCG TTAAATACAA ATACTCTTAT GCATTTCATA TCATATAATC AGCAAGCAGC AATCACATAT TTGTCAACAA CTTAATATCT AAGGTCCAGA TTTTAACACT AATTGAAAAA CTAATGATAG ATTCAATATA TATATGCTAC AAATAAATTG AACTAAATCC TCAATAAACC AAACGTGTAG AACACGAAAT CAATAAAATT AACACAACAT CGTGAAATCT AATAATCAAC GGTCAACGGG TCAACCTAGC TATACGTTGG TGATAACCTA ATGAATTGAA ATCGAAAACA AACATCAAAT TCAGGCTTGA TAAATTGAAA TCAGTATTCA AAGTGTCCGA TTAACCTAGA AAACGAGAGA AAATATATTC TAAACGTATA ACACCTTGAC ATGGATTCAA ATTTAAGATG AAAATCAAGA TAAACATTCA TAGATCTGCA ACCGAAGATA ACAAATTAAA TATGATTACA GAGGGAGAGA
TTTGAAATTA CCTGCCGAAA GTAGAATGGT

Retrieve as FASTA