View Redoxidase 14549

Entry information : HaCRX07HanXRQChr09g0241531

Entry ID	14549
Creation	2017-11-07 (Christophe Dunand)
Last sequence changes	2017-11-07 (Christophe Dunand)
Sequence status	N/D
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaCRX07HanXRQChr09g0241531

Name

HaCRX07HanXRQChr09g0241531

Class

Other cupredoxin Protein [Orthogroup: CRX001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaCRX07 start..stop	S start..stop
HaCRX08	251	4.56e-86	1..193	1..191
HaCRX14	163	6.31e-51	1..130	1..132
HaCRX10	161	2.26e-50	9..133	9..132
HaCRX09	158	1.1e-49	8..145	7..143

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14549' 'complement(join(24595306..24595887))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	24595306..24595887	580
complement(join(24595306..24595887))

Literature and cross-references HaCRX07HanXRQChr09g0241531

DNA ref.	HanXRQ genome: HanXRQChr09 (24595887..24595306)

Protein sequence: HaCRX07HanXRQChr09g0241531

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	193 (167)
PWM (Da):	20042.33 (17268.8)
PI (pH):	8.87 (8.08)	Peptide Signal:	cut: 27 range:27-193

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MTRLKSTVVV LAVMMAASFQ LQPTVAKTRH IVGDALGWTI PPNGAATYAT WASRQSFTVG DTLFFNFTTG FHTVAEVSQS ATADPCTSTN TLSLNPTGPA TITLTRPGTH YYICTIIGHC
QIGQKLTIKV SPSTATAPES TALSPSSTIA TPPSAYNLSP ASSPIPLPWS ASPLAFAPVV PVTLLAVTLA FFY

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGACAAGAC TGAAGTCAAC GGTCGTCGTG TTGGCGGTCA TGATGGCTGC ATCTTTCCAA CTACAACCCA CGGTAGCAAA AACTAGGCAT ATCGTCGGAG ACGCCCTGGG CTGGACTATT CCGCCTAATG GCGCTGCCAC TTATGCCACT TGGGCTTCCC GACAATCCTT CACCGTTGGC GATACACTCT TTTTTAACTT CACCACTGGA TTCCATACTG TGGCCGAAGT TTCCCAGTCG GCCACAGCGG ACCCATGCAC CTCCACCAAC ACCCTCTCAC TCAACCCCAC CGGCCCCGCC ACCATCACAT TGACGCGCCC TGGCACCCAC TACTATATCT GCACTATTAT AGGCCATTGC CAAATCGGTC AGAAATTAAC TATCAAGGTC TCTCCCTCTA CCGCCACTGC TCCTGAATCA ACTGCACTAT CTCCATCATC AACCATCGCT ACTCCTCCAT CTGCCTATAA CCTATCTCCT
GCTAGCAGCC CCATACCACT ACCATGGAGT GCATCTCCTC TAGCTTTTGC CCCTGTGGTG CCCGTCACTT TGTTGGCCGT TACTTTGGCT TTCTTTTACT AG

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA