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Entry information : HaPNC13(HanXRQChr11g0340461)
Entry ID 14567
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2020-02-03 (Catherine )
Peroxidase information: HaPNC13(HanXRQChr11g0340461)
Name HaPNC13(HanXRQChr11g0340461)
Class Plantacyanin    [Orthogroup: PNC001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type Fruits
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPNC13
start..stop		 S start..stop
HaPNC21 258 3.41e-91 1..126 1..126
HaPNC19 258 3.41e-91 1..126 1..126
HaPNC10 258 3.41e-91 1..126 1..126
HaPNC09 258 3.41e-91 1..126 1..126
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 111234032..111234209 176 N° 2 111233374..111233576 201  
complement(join(111233374..111233576,111234032..111234209))


exon

Literature and cross-references HaPNC13(HanXRQChr11g0340461)
EST ref. GenBank:   DW355126.1
Protein sequence: HaPNC13(HanXRQChr11g0340461)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   126 (97)
PWM (Da):   %s   13483.42 (10493.9) Transmb domain:   %s   i7-29o
PI (pH):   %s   4.44 (4.54) Peptide Signal:   %s   cut: 30 range:30-126
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAEGRGSVVVSMVVLCLLVVAFQCEVAQAATYVVGDDNGWTFSVA
GWENGKNFNAGDVLVFNYPQGAHNVVVVNKESYDGCNTTPSEAKVYTSGNDQITLVKGYNNFICSYFGHCDSGMKIQIFVS

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGAGGGAAGAGGCAGTGTAGTGGTGTCAATGGTGGTGCTTTGTCTACTAGTGGTGGCATTTCAATGCGAGGTAGCTCAAGCAGCTACTTATGTTGTCGGCGATGACAATGGCTGG
ACGTTTAGTGTTGCTGGCTGGGAAAACGGCAAGAATTTCAACGCAGGCGATGTCCTTGGTATCCTCTCAACATGAGGTCACCACTTTTGTCACTTCAGTCCAAGAATGAAACGTTTTGCA
TCTGGGTCCTGATGTTTCATTTTTGTTGTCATTTTCATCCAATTGGCAAAGTGGGTTAGAATTTTCCGTTAACTACTCCCCTTTTTTTGGTTTCCTCATTTAAATGAAGGGTATAATCGT
CATTTTATGTCATAATATATTTAATTAAATGAGAAAAACGACAAAAATGTTGAAGTTAACAGAAAATTCTAACTCAGATTGCCAATTGGATTAATATGGCAACAAAAATGAAACGTCAGG
TGCCCAGATGCAAAACGTTTCATTTTTGAACTGAAGTGGTAAAAGTGGCCTAAACTAAAAGACCATTTTGGCATTTTACACTAAAATATAATAGTTAAGTAATTACAAAGAAATGCTTAT
TTTAGTTCAATTGTTATTATATGATTGGAACAGTGTGTTTAACTACCCACAAGGAGCACATAATGTGGTGGTCGTGAACAAGGAAAGCTATGATGGGTGCAACACAACCCCAAGCGAAGC
AAAGGTGTACACAAGTGGAAATGACCAAATTACCCTTGTGAAGGGTTATAACAACTTCATTTGTAGTTACTTTGGTCACTGTGATAGTGGCATGAAGATTCAAATCTTTGTATCTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGAGGGAAGAGGCAGTGTAGTGGTGTCAATGGTGGTGCTTTGTCTACTAGTGGTGGCATTTCAATGCGAGGTAGCTCAAGCAGCTACTTATGTTGTCGGCGATGACAATGGCTGG
ACGTTTAGTGTTGCTGGCTGGGAAAACGGCAAGAATTTCAACGCAGGCGATGTCCTTGTGTTTAACTACCCACAAGGAGCACATAATGTGGTGGTCGTGAACAAGGAAAGCTATGATGGG
TGCAACACAACCCCAAGCGAAGCAAAGGTGTACACAAGTGGAAATGACCAAATTACCCTTGTGAAGGGTTATAACAACTTCATTTGTAGTTACTTTGGTCACTGTGATAGTGGCATGAAG
ATTCAAATCTTTGTATCTTAA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGAGG GAAGAGGCAG TGTAGTGGTG TCAATGGTGG TGCTTTGTCT ACTAGTGGTG GCATTTCAAT GCGAGGTAGC TCAAGCAGCT ACTTATGTTG TCGGCGATGA CAATGGCTGG  ACGTTTAGTG TTGCTGGCTG GGAAAACGGC AAGAATTTCA ACGCAGGCGA TGTCCTTGTG TTTAACTACC CACAAGGAGC ACATAATGTG GTGGTCGTGA ACAAGGAAAG CTATGATGGG  TGCAACACAA CCCCAAGCGA AGCAAAGGTG TACACAAGTG GAAATGACCA AATTACCCTT GTGAAGGGTT ATAACAACTT CATTTGTAGT TACTTTGGTC ACTGTGATAG TGGCATGAAG 
ATTCAAATCT TTGTATCTTA A 

Retrieve as FASTA