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Entry information : LsePrx08-1
Entry ID 1458
Creation 2006-09-01 (Christophe Dunand)
Last sequence changes 2006-09-01 (Christophe Dunand)
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2010-05-04 (Christophe Dunand)
Peroxidase information: LsePrx08-1
Name LsePrx08-1
Class Class III peroxidase     [Orthogroup: Prx004]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca serriola    [TaxId: 75943 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsePrx08-1
start..stop		 S start..stop
HaPrx67 403 6.68e-144 2..217 60..277
HaPrx26 372 1.38e-131 1..218 53..274
HaPrx101 368 5.78e-130 1..218 54..275
HaPrx27 363 3.56e-128 1..218 52..273
Literature and cross-references LsePrx08-1
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project. Unpublished (2002)

EST ref. GenBank:   BQ995394.1 [Fragment]
Protein sequence: LsePrx08-1
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   218 (156)
PWM (Da):   %s   23492.86 (16743.6)  
PI (pH):   %s   7.37 (6.49) Peptide Signal:   %s   cut: 24 range:24-179
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ARMAASLLRL HFHDCFVKGC DASILLDDGG SRNIISEKGS GPNRNSVRGF EIIDEIKAAL ETVCPQTVSC ADILALAARD STVLSGGPSW EVPAGRRDSL GASLRGSNHN IPAPNNTFQT 
ILTKFKLKGL DIIDLVALSG SHTIGNARCG SFKQRLYNNK EQNDQLFAAQ LRANCPQSGG DENLFFLDNV TPTKFDNGYY KNLMESKGVL SSDQILFT 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. Sequencing error at position "MESKGVL" corrected by the PeroxiBase team. 5' and 3' ends are missing.