Entry information : HaSTC07HanXRQChr03g0087411
Entry ID 14582
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaSTC07HanXRQChr03g0087411
Name HaSTC07HanXRQChr03g0087411
Class Stellacyanin    [Orthogroup: STC001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaSTC07
start..stop
S start..stop
HaSTC08 328 7.52e-118 1..163 1..163
HaSTC09 303 9.44e-108 1..157 1..158
HaSTC06 226 3.21e-77 1..160 1..152
HaSTC10 224 1.02e-76 1..120 1..120
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14582' 'join(150194249..150194414,150194699..150195024)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 150194249..150194414 164 N° 2 150194699..150195024 324  
join(150194249..150194414,150194699..150195024)


exon

Literature and cross-references HaSTC07HanXRQChr03g0087411
DNA ref. HanXRQ genome:   HanXRQChr03 (150194249..150195024)
Protein sequence: HaSTC07HanXRQChr03g0087411
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   163 (140)
PWM (Da):   %s   17609.03 (15110.7) Transmb domain:   %s   i7-29o143-162i
PI (pH):   %s   8.81 (8.46) Peptide Signal:   %s   cut: 24 range:24-163
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATSRLNIFFMATIFVLVTSIAAKEYVVGDENGWKLDFDYQNWAK
DKVFYVGDTL
VFNYAAGVHNVAKVNGTGFQQCSTSASNGIMTSGQDVVPLQTPGRKWYICGVGKHCELRNMKLVITVLPQTWAPAPSPMATSTSGKLAVPTIYGFVVALFGSLLLLLV

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCACATCCCGTTTGAACATTTTCTTCATGGCTACAATTTTTGTTCTCGTGACTTCAATTGCTGCGAAGGAATACGTTGTGGGGGATGAAAATGGTTGGAAACTCGACTTTGATTAT
CAAAATTGGGCCAAGGATAAAGTTTTCTACGTCGGAGATACCCTTG
TGGTATGTTATATATATCCCCGTCATTTTATTTAGATTTCTACTACAAAACTGGGTATTTGCAACGATCAATTT
GGTCACAAACCGGTAACAAAAAGCTTCGCAAAATCTGTTTTGCGACCGGTTTTAGCAACTAAAAAACCACTTTGTTTGTACCTGTGACTTGGATGCGGTCGCTACTTTTGTAACACTTTT
AAATTCTGTCGCAAACTTTGCGACCGAAAACGTACATCTCCCATTCGCAAGTCGTTTAATAAATGTAATCCTGTACAATTCTCTTGATGCAGTTTTCAACTATGCGGCTGGTGTTCACAA
TGTTGCGAAAGTCAACGGCACCGGTTTCCAACAATGTAGCACTTCAGCTTCCAATGGAATCATGACAAGTGGACAGGATGTTGTTCCCCTACAAACCCCTGGAAGGAAATGGTACATTTG
TGGTGTCGGAAAGCATTGCGAATTGAGAAACATGAAGCTTGTCATCACTGTTCTACCTCAAACATGGGCTCCGGCTCCAAGCCCAATGGCGACATCTACATCTGGCAAATTGGCAGTACC
AACTATCTATGGATTTGTAGTTGCATTATTCGGCAGCCTGCTATTGCTATTGGTTTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCACATCCCGTTTGAACATTTTCTTCATGGCTACAATTTTTGTTCTCGTGACTTCAATTGCTGCGAAGGAATACGTTGTGGGGGATGAAAATGGTTGGAAACTCGACTTTGATTAT
CAAAATTGGGCCAAGGATAAAGTTTTCTACGTCGGAGATACCCTTG
TTTTCAACTATGCGGCTGGTGTTCACAATGTTGCGAAAGTCAACGGCACCGGTTTCCAACAATGTAGCACTTCA
GCTTCCAATGGAATCATGACAAGTGGACAGGATGTTGTTCCCCTACAAACCCCTGGAAGGAAATGGTACATTTGTGGTGTCGGAAAGCATTGCGAATTGAGAAACATGAAGCTTGTCATC
ACTGTTCTACCTCAAACATGGGCTCCGGCTCCAAGCCCAATGGCGACATCTACATCTGGCAAATTGGCAGTACCAACTATCTATGGATTTGTAGTTGCATTATTCGGCAGCCTGCTATTG
CTATTGGTTTGA

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCACAT CCCGTTTGAA CATTTTCTTC ATGGCTACAA TTTTTGTTCT CGTGACTTCA ATTGCTGCGA AGGAATACGT TGTGGGGGAT GAAAATGGTT GGAAACTCGA CTTTGATTAT  CAAAATTGGG CCAAGGATAA AGTTTTCTAC GTCGGAGATA CCCTTGTTTT CAACTATGCG GCTGGTGTTC ACAATGTTGC GAAAGTCAAC GGCACCGGTT TCCAACAATG TAGCACTTCA  GCTTCCAATG GAATCATGAC AAGTGGACAG GATGTTGTTC CCCTACAAAC CCCTGGAAGG AAATGGTACA TTTGTGGTGT CGGAAAGCAT TGCGAATTGA GAAACATGAA GCTTGTCATC  ACTGTTCTAC CTCAAACATG GGCTCCGGCT CCAAGCCCAA TGGCGACATC TACATCTGGC AAATTGGCAG TACCAACTAT CTATGGATTT GTAGTTGCAT TATTCGGCAG CCTGCTATTG 
CTATTGGTTT GA 

Retrieve as FASTA