Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
334 (306) |
PWM (Da): |
35870.18 (33153.8) |
Transmb domain: |
i12-34o |
PI (pH): |
8.93 (9.06) |
Peptide Signal: |
cut: 29 range:29-334 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASASVSYGN ALFSSVALFA ILVTCAAASP YAAGLSENFY HKTCPQAASI VESYVTKFLN KDKNFAGAFV RLQFHDCWVG GCEGSVLLNS TKTNQAEREA HVNFGLRGIA EVDEIKAALE
RHCPGVVSCA DILIMAARDA TVKVGGPAWP VALGRRDGVH STSLMADSNL PFPVLNYSGL VANFAVKGFN SREMITLSGA HTIGRTQCNG ILPHLYNFTG KNDATDIDPA MNKKFAVFLK
KHCPQGNRTN TIFIDSTADT FDRAYYKNVI KGQGIFITDS TLITNPVGKK VVTLFSKPGK SFFTEFASSM VKMGNLGVLT GTEGEIRKKC QFVN
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic. Incorrect prediction from Phytozome (exon was not predicted). No EST found but RNA seq. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCATCAG CAAGTGTAAG CTACGGCAAT GCACTTTTTT CTAGCGTCGC TCTTTTTGCA ATACTTGTTA CTTGTGCCGC AGCGAGTCCA TATGCAGCCG GCCTATCAGA GAACTTTTAC
CACAAAACAT GTCCTCAAGC AGCTTCGATC GTAGAATCGT ACGTGACAAA GTTCCTCAAC AAGGACAAGA ACTTTGCTGG AGCCTTCGTC AGATTGCAGT TTCATGATTG CTGGGTTGGG
GTAAGAATTC TTCAGCCATG AAACCCTTCC TGCTCTGACA TGCATCATTG ACTACCTGAA TCTTCAGTAA TGACAGAGTT GGAGGTTGCT ATTGTCAGAG ATAACAAACA ATGTTTCCTG
TTGCGAATAT CAGATTCACG CTGAAAATAT CAAGCGGTAG CAAGATACTG ATTTTCATAC GTATTGTTCC GATGCACTTA AAGGGCTGTG AAGGTTCTGT TCTTCTGAAC TCCACCAAAA
CCAACCAAGC GGAGAGGGAA GCTCATGTCA ACTTCGGTCT CAGAGGTATT GCCGAGGTCG ATGAAATAAA GGCAGCACTT GAACGTCACT GCCCAGGAGT TGTATCTTGC GCTGACATTC
TCATCATGGC TGCTCGTGAC GCCACAGTCA AGGTACTTTT CAATGTATTC ATTACTTCTC TTGCATTCAT GAAAGCAAGA GTTCTGCGTA AGTTTTTGAA AAGAGATAGG ACAAAATCTG
CCTATCTCAT TGTTTTGTAA GCATTTTTGC CTCTTGTTGA AACCTGTAGG TTGGAGGCCC CGCTTGGCCC GTCGCTTTGG GTCGCAGAGA CGGAGTGCAC TCCACATCCT TGATGGCTGA
TAGCAATCTA CCATTCCCTG TGCTGAACTA CAGCGGGCTC GTTGCTAACT TTGCTGTCAA AGGGTTCAAT TCAAGAGAAA TGATAACACT CTCAGGTCGA TAACTGCCAC CAACAGCCCA
TTCTTTTCAA CAGCCCAACT TTTCTGCACT GGATTTATCA TTTTAAAAGA CGCCTTTCCT TCTACCTTTC GAAAAATGCT GGAGATTAAA GTTTTCATTT TTGCATTTCG TCCCTGTACA
ACTTGCTCGG GTCTTCCCAT CCTTTCTTGC ATATTAATTT GTAGCCCCAT AACTTTTTAC ATTTGGAAGG TATTTTTCTT GACTACGTTT CGATCTGACT CTATTCAACT GCTACTATAT
TATGACTCTG ATCTGTCTCT CAAGTAGCTA GTGCAGTACC TATTTTTGCT TTGCTGTTGT AAGCTGACAA GAAACTTCAG AGTATAGACA GCAAGAGCTA GACCTGATCG ATTTGACGTC
CACATGTTGT GCAGGTGCAC ACACTATTGG TCGGACTCAA TGCAACGGAA TCCTCCCACA TCTGTATAAC TTCACTGGAA AGAATGACGC CACCGACATT GACCCTGCCA TGAATAAGAA
GTTCGCTGTA TTCCTCAAGA AGCATTGTCC TCAGGGTAAC AGAACCAATA CAATCTTCAT CGACTCCACA GCAGACACTT TCGACCGTGC ATATTACAAA AATGTGATAA AGGGACAAGG
AATTTTCATC ACTGATTCCA CCCTCATCAC CAACCCGGTA GGCAAGAAGG TAGTCACTTT GTTCTCGAAA CCTGGCAAGA GTTTCTTCAC AGAATTTGCC TCTAGCATGG TGAAGATGGG
AAACCTGGGG GTGCTAACTG GAACCGAAGG TGAAATTCGC AAGAAGTGCC AATTTGTGAA TTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCATCAG CAAGTGTAAG CTACGGCAAT GCACTTTTTT CTAGCGTCGC TCTTTTTGCA ATACTTGTTA CTTGTGCCGC AGCGAGTCCA TATGCAGCCG GCCTATCAGA GAACTTTTAC
CACAAAACAT GTCCTCAAGC AGCTTCGATC GTAGAATCGT ACGTGACAAA GTTCCTCAAC AAGGACAAGA ACTTTGCTGG AGCCTTCGTC AGATTGCAGT TTCATGATTG CTGGGTTGGG
GGCTGTGAAG GTTCTGTTCT TCTGAACTCC ACCAAAACCA ACCAAGCGGA GAGGGAAGCT CATGTCAACT TCGGTCTCAG AGGTATTGCC GAGGTCGATG AAATAAAGGC AGCACTTGAA
CGTCACTGCC CAGGAGTTGT ATCTTGCGCT GACATTCTCA TCATGGCTGC TCGTGACGCC ACAGTCAAGG TTGGAGGCCC CGCTTGGCCC GTCGCTTTGG GTCGCAGAGA CGGAGTGCAC
TCCACATCCT TGATGGCTGA TAGCAATCTA CCATTCCCTG TGCTGAACTA CAGCGGGCTC GTTGCTAACT TTGCTGTCAA AGGGTTCAAT TCAAGAGAAA TGATAACACT CTCAGGTGCA
CACACTATTG GTCGGACTCA ATGCAACGGA ATCCTCCCAC ATCTGTATAA CTTCACTGGA AAGAATGACG CCACCGACAT TGACCCTGCC ATGAATAAGA AGTTCGCTGT ATTCCTCAAG
AAGCATTGTC CTCAGGGTAA CAGAACCAAT ACAATCTTCA TCGACTCCAC AGCAGACACT TTCGACCGTG CATATTACAA AAATGTGATA AAGGGACAAG GAATTTTCAT CACTGATTCC
ACCCTCATCA CCAACCCGGT AGGCAAGAAG GTAGTCACTT TGTTCTCGAA ACCTGGCAAG AGTTTCTTCA CAGAATTTGC CTCTAGCATG GTGAAGATGG GAAACCTGGG GGTGCTAACT
GGAACCGAAG GTGAAATTCG CAAGAAGTGC CAATTTGTGA ATTAG
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Retrieve as FASTA
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