Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
574 (542) |
| PWM (Da): |
59605.42 (55916.5) |
Transmb domain: |
i13-35o |
| PI (pH): |
9.47 (9.46) |
Peptide Signal: |
cut: 33 range:33-574 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MEIMRRTHVD RSFAILIFLG AMLFIAAPIC SAASPPHQHQ FLVHHHLLPK QRHHHPPKEL HHHPPRLLHH HPPKEFHHHP PKLLHHHPQK EFHHHPPRLL HHHPKRVSPP PPKAASPPPP
KRVSPPPPKA SSPPPPKAVS PPPPRAASPP PPRAVSPPPP RAxxxxxxxS LSTTPRFASP PPPVVSPPPP PAASPPPPTA ASPPPPPPGA SPPPPTAVSP PPAPPALSPP PPAIAPAPST
PPPAIAPAVS PPPPAIAPAV SPPPPAPAGL DPSYYSSSCP SAIAWVQNMT ASMVQSDRTM AAAFLRLHFH DCFVRGCDGS VLLDSTSGNQ AEKDSFANAN SLRGFTQIDQ VKAQLEEVCP
GVVSCADILA LTARDAIVQI GGQSWVVDLG RKDGIVSIAS ESMSSLPSPF ATYTQLVQGF AAVGMSEKDM VVLSGAHTIG KTKCGLFSQR LYGFSGPGAV NGTDPTLDPD YANVLRQQCP
QNAPLNTVFF DPSGSFPGQT YDKGFFQAVS ANRGVLASDA ALLTSSFGAS QVALEAGATS PFMTDFAISM RKMGTIAAPA GSVLEVRKNC HFVN*
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Retrieve as FASTA
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| Remarks |
No expression data. Very long 5' end. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGAGATCA TGAGAAGGAC TCATGTGGAT CGCTCGTTTG CAATTTTGAT CTTCCTTGGA GCCATGCTGT TCATTGCAGC TCCAATCTGC AGCGCAGCAT CCCCGCCCCA CCAGCACCAG
TTTCTCGTTC ACCACCACCT CCTCCCAAAG CAACGCCACC ACCACCCCCC AAAAGAGCTC CACCACCACC CCCCAAGGCT GCTTCACCAC CACCCCCCAA AAGAGTTTCA CCACCACCCC
CCAAAGCTGC TTCACCACCA CCCCCAAAAA GAGTTTCACC ACCACCCCCC AAGGCTGCTT CACCACCACC CCAAAAGAGT TTCACCACCA CCTCCCAAAG CTGCTTCACC ACCACCCCCC
AAAAGAGTTT CACCACCACC TCCCAAAGCT TCTTCACCAC CACCCCCAAA GGCAGTCTCA CCACCACCCC CCAGAGCTGC TTCACCACCA CCCCCAAGAG CAGTCTCGCC ACCACCCCCA
AGAGCTnnnn nnnnnnnnnn nnnnnnCAGT CTCTCCACCA CCCCCAGATT TGCTTCACCA CCACCTCCAG TAGTCTCACC ACCACCACCC CCAGCCGCTT CGCCACCACC CCCTACAGCA
GCATCACCAC CACCACCACC CCCAGGAGCT TCACCACCGC CCCCCACAGC AGTGTCGCCA CCACCAGCAC CCCCAGCACT TTCACCACCG CCTCCAGCAA TTGCACCAGC ACCTTCAACA
CCACCTCCAG CAATTGCACC AGCAGTTTCA CCACCACCTC CCGCAATTGC ACCAGCAGTT TCACCACCAC CTCCGGCCCC TGCAGGTCTG GACCCATCAT ACTATTCTTC CAGCTGTCCT
TCGGCAATTG CCTGGGTGCA AAATATGACG GCCAGTATGG TTCAAAGTGA CAGGACCATG GCAGCTGCCT TCCTGAGGTT GCACTTTCAT GACTGCTTCG TTCGGGTACG TCATGAGCTC
GTAAATTGAA GATGCCACAC AATTCAAGAA CAAAAGCATG AATCAATCAT TCCAGCATTT TTAAGCTTAG CCTCCTTCTC GGCCCAGGAG CTCACATCAT CCGCTTCTGA TTTGCAGGGA
TGCGATGGAT CCGTTCTCCT GGACTCCACC TCTGGCAACC AAGCCGAGAA GGACTCGTTC GCCAATGCCA ATTCCCTCAG AGGCTTTACT CAAATCGATC AGGTTAAAGC CCAGCTGGAA
GAAGTCTGTC CTGGTGTCGT CTCGTGCGCT GACATCCTTG CTCTTACAGC TCGAGACGCC ATTGTCCAGG TAAAGAAGGA GTCAACTATG CTCTAACACT TGGGACTTAA TACCAGTTCC
ACCTCGATTC TGAAAGATGT AATTCGATAC ATTTAGTATA GTGACTCGTC ATATGGCTCT GCACCTTGCA TATCATGAGC TTAAATCAGG CTTGCAACGT CTGTGCAGAT CGGAGGGCAA
TCTTGGGTGG TCGATCTCGG AAGGAAAGAC GGCATTGTTT CAATTGCATC TGAATCAATG TCCAGCTTGC CTTCTCCTTT CGCCACCTAC ACGCAACTGG TCCAGGGCTT CGCCGCAGTC
GGTATGAGCG AAAAGGATAT GGTGGTACTT TCAGGTGAGA CGAACTTGAC GAACAGCACT GGCGGGCGCA GTCTAGTTTT TCTGAATTAG TAGTGGGAGA AAGGGATTTG TGTCAGAGAC
GCTGTCAGAG AGTAATGGTT TATTTACCTT CTGCCATGTT CGCTGTAAAA TTCGCAGGTG CGCACACCAT AGGCAAAACC AAGTGCGGGT TATTTTCCCA GCGCCTTTAC GGATTCTCCG
GCCCTGGAGC AGTCAATGGC ACAGATCCGA CCCTGGATCC AGATTACGCC AACGTGTTGA GGCAGCAGTG CCCACAAAAT GCTCCCTTGA ACACGGTTTT CTTCGACCCG TCAGGCAGCT
TCCCCGGACA GACCTACGAC AAGGGATTCT TTCAGGCCGT GAGCGCCAAC AGGGGAGTGC TCGCCTCTGA TGCAGCCCTT CTGACCAGCT CCTTCGGTGC CAGCCAGGTG GCTTTGGAGG
CAGGCGCCAC TTCTCCTTTC ATGACAGACT TCGCAATCTC CATGCGGAAA ATGGGTACGA TCGCTGCTCC AGCGGGATCT GTGTTGGAAG TTCGAAAGAA CTGCCATTTC GTGAATTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGAGATCA TGAGAAGGAC TCATGTGGAT CGCTCGTTTG CAATTTTGAT CTTCCTTGGA GCCATGCTGT TCATTGCAGC TCCAATCTGC AGCGCAGCAT CCCCGCCCCA CCAGCACCAG
TTTCTCGTTC ACCACCACCT CCTCCCAAAG CAACGCCACC ACCACCCCCC AAAAGAGCTC CACCACCACC CCCCAAGGCT GCTTCACCAC CACCCCCCAA AAGAGTTTCA CCACCACCCC
CCAAAGCTGC TTCACCACCA CCCCCAAAAA GAGTTTCACC ACCACCCCCC AAGGCTGCTT CACCACCACC CCAAAAGAGT TTCACCACCA CCTCCCAAAG CTGCTTCACC ACCACCCCCC
AAAAGAGTTT CACCACCACC TCCCAAAGCT TCTTCACCAC CACCCCCAAA GGCAGTCTCA CCACCACCCC CCAGAGCTGC TTCACCACCA CCCCCAAGAG CAGTCTCGCC ACCACCCCCA
AGAGCTnnnn nnnnnnnnnn nnnnnnCAGT CTCTCCACCA CCCCCAGATT TGCTTCACCA CCACCTCCAG TAGTCTCACC ACCACCACCC CCAGCCGCTT CGCCACCACC CCCTACAGCA
GCATCACCAC CACCACCACC CCCAGGAGCT TCACCACCGC CCCCCACAGC AGTGTCGCCA CCACCAGCAC CCCCAGCACT TTCACCACCG CCTCCAGCAA TTGCACCAGC ACCTTCAACA
CCACCTCCAG CAATTGCACC AGCAGTTTCA CCACCACCTC CCGCAATTGC ACCAGCAGTT TCACCACCAC CTCCGGCCCC TGCAGGTCTG GACCCATCAT ACTATTCTTC CAGCTGTCCT
TCGGCAATTG CCTGGGTGCA AAATATGACG GCCAGTATGG TTCAAAGTGA CAGGACCATG GCAGCTGCCT TCCTGAGGTT GCACTTTCAT GACTGCTTCG TTCGGGGATG CGATGGATCC
GTTCTCCTGG ACTCCACCTC TGGCAACCAA GCCGAGAAGG ACTCGTTCGC CAATGCCAAT TCCCTCAGAG GCTTTACTCA AATCGATCAG GTTAAAGCCC AGCTGGAAGA AGTCTGTCCT
GGTGTCGTCT CGTGCGCTGA CATCCTTGCT CTTACAGCTC GAGACGCCAT TGTCCAGATC GGAGGGCAAT CTTGGGTGGT CGATCTCGGA AGGAAAGACG GCATTGTTTC AATTGCATCT
GAATCAATGT CCAGCTTGCC TTCTCCTTTC GCCACCTACA CGCAACTGGT CCAGGGCTTC GCCGCAGTCG GTATGAGCGA AAAGGATATG GTGGTACTTT CAGGTGCGCA CACCATAGGC
AAAACCAAGT GCGGGTTATT TTCCCAGCGC CTTTACGGAT TCTCCGGCCC TGGAGCAGTC AATGGCACAG ATCCGACCCT GGATCCAGAT TACGCCAACG TGTTGAGGCA GCAGTGCCCA
CAAAATGCTC CCTTGAACAC GGTTTTCTTC GACCCGTCAG GCAGCTTCCC CGGACAGACC TACGACAAGG GATTCTTTCA GGCCGTGAGC GCCAACAGGG GAGTGCTCGC CTCTGATGCA
GCCCTTCTGA CCAGCTCCTT CGGTGCCAGC CAGGTGGCTT TGGAGGCAGG CGCCACTTCT CCTTTCATGA CAGACTTCGC AATCTCCATG CGGAAAATGG GTACGATCGC TGCTCCAGCG
GGATCTGTGT TGGAAGTTCG AAAGAACTGC CATTTCGTGA ATTAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GTTGTCTTAT ACATTTTTCG AGAGTCCTTC TTACTGATTC AGGAATCCAA AGACACTATA TCGTCTCTGT CGAGCCCTAT GGAGATCATG AGAAGGACTC ATGTGGATCG CTCGTTTGCA
ATTTTGATCT TCCTTGGAGC CATGCTGTTC ATTGCAGCTC CAATCTGCAG CGCAGCATCC CCGCCCCACC AGCACCAGTT TCTCGTTCAC CACCACCTCC TCCCAAAGCA ACGCCACCAC
CACCCCCCAA AAGAGCTCCA CCACCACCCC CCAAGGCTGC TTCACCACCA CCCCCCAAAA GAGTTTCACC ACCACCCCCC AAAGCTGCTT CACCACCACC CCCAAAAAGA GTTTCACCAC
CACCCCCCAA GGCTGCTTCA CCACCACCCC AAAAGAGTTT CACCACCACC TCCCAAAGCT GCTTCACCAC CACCCCCCAA AAGAGTTTCA CCACCACCTC CCAAAGCTTC TTCACCACCA
CCCCCAAAGG CAGTCTCACC ACCACCCCCC AGAGCTGCTT CACCACCACC CCCAAGAGCA GTCTCGCCAC CACCCCCAAG AGCTnnnnnn nnnnnnnnnn nnnnCAGTCT CTCCACCACC
CCCAGATTTG CTTCACCACC ACCTCCAGTA GTCTCACCAC CACCACCCCC AGCCGCTTCG CCACCACCCC CTACAGCAGC ATCACCACCA CCACCACCCC CAGGAGCTTC ACCACCGCCC
CCCACAGCAG TGTCGCCACC ACCAGCACCC CCAGCACTTT CACCACCGCC TCCAGCAATT GCACCAGCAC CTTCAACACC ACCTCCAGCA ATTGCACCAG CAGTTTCACC ACCACCTCCC
GCAATTGCAC CAGCAGTTTC ACCACCACCT CCGGCCCCTG CAGGTCTGGA CCCATCATAC TATTCTTCCA GCTGTCCTTC GGCAATTGCC TGGGTGCAAA ATATGACGGC CAGTATGGTT
CAAAGTGACA GGACCATGGC AGCTGCCTTC CTGAGGTTGC ACTTTCATGA CTGCTTCGTT CGGGGATGCG ATGGATCCGT TCTCCTGGAC TCCACCTCTG GCAACCAAGC CGAGAAGGAC
TCGTTCGCCA ATGCCAATTC CCTCAGAGGC TTTACTCAAA TCGATCAGGT TAAAGCCCAG CTGGAAGAAG TCTGTCCTGG TGTCGTCTCG TGCGCTGACA TCCTTGCTCT TACAGCTCGA
GACGCCATTG TCCAGATCGG AGGGCAATCT TGGGTGGTCG ATCTCGGAAG GAAAGACGGC ATTGTTTCAA TTGCATCTGA ATCAATGTCC AGCTTGCCTT CTCCTTTCGC CACCTACACG
CAACTGGTCC AGGGCTTCGC CGCAGTCGGT ATGAGCGAAA AGGATATGGT GGTACTTTCA GGTGCGCACA CCATAGGCAA AACCAAGTGC GGGTTATTTT CCCAGCGCCT TTACGGATTC
TCCGGCCCTG GAGCAGTCAA TGGCACAGAT CCGACCCTGG ATCCAGATTA CGCCAACGTG TTGAGGCAGC AGTGCCCACA AAATGCTCCC TTGAACACGG TTTTCTTCGA CCCGTCAGGC
AGCTTCCCCG GACAGACCTA CGACAAGGGA TTCTTTCAGG CCGTGAGCGC CAACAGGGGA GTGCTCGCCT CTGATGCAGC CCTTCTGACC AGCTCCTTCG GTGCCAGCCA GGTGGCTTTG
GAGGCAGGCG CCACTTCTCC TTTCATGACA GACTTCGCAA TCTCCATGCG GAAAATGGGT ACGATCGCTG CTCCAGCGGG ATCTGTGTTG GAAGTTCGAA AGAACTGCCA TTTCGTGAAT
TAGACAGGTG ACTCATTAAC AGGCTCGCCT CTGAACATTA AATTACAACA GAGATTTGAA TCTACTCATG AATTAGATAA CCCCACATCA TTTATGTCAA ACAACTTTCT ACTGTCTTAG
CGTAGCTAAC ATTCTTCACG CATGTACTTG TTAGCAAGGT GCATGCGCAG GTCTAGTCAA CACGTCCAAC CATCTAGAAT CTGCTCGGGT AGCCTCGAAG TCGTCAAGAG CAGAATAGGC
ATAGTTGAAT AGTTCTGTGG GAGGTCTGAC TGCAGGACGT AGCGAATTCG AGAGTACAAG ATCCGAGAAC CTGAGCTGGG CCCATTCTGC TCAGCTCAAT AGCTCAGGAG TAGAAAACTT
AAGTGATTAG TCACGAGGAT GATGATCATC CAGTATAGGA CATCAGGTAA GAGGAACGCT AGATCCGAAG AACAAACTTC AGAGATACAT TCCTACAGTT TTGCCATGCC AGCAAGGGGA
ATAGAGACGA GATTGGTCCA GGACGAAAAA TCCTCTCTGA TACCCGATGG TTAAATAAAG CTGGCAATTT TTGCCCGACG TAGGGGCTTT TTACTGCATC TCCGATCAGG TGTCAATGAC
T
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Retrieve as FASTA
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