1. Browse the Database
  2. View Redoxidase
Entry information : LsaPrx16
Entry ID 1466
Creation 2006-08-12 (Christophe Dunand)
Last sequence changes 2006-08-12 (Christophe Dunand)
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2010-05-04 (Christophe Dunand)
Peroxidase information: LsaPrx16
Name LsaPrx16
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca sativa (Lettuce)    [TaxId: 4236 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsaPrx16
start..stop		 S start..stop
LsaPrx15 184 1.22e-59 1..108 64..171
LvPrx15 183 4.33e-59 1..108 64..171
LperPrx15 181 1.11e-58 1..107 66..172
ToPrx15 177 4.65e-57 1..107 66..172
Literature and cross-references LsaPrx16
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project. Unpublished (2002)

EST ref. GenBank:   BQ848717.1 [Fragment]
Protein sequence: LsaPrx16
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   107
PWM (Da):   %s   11150.48  
PI (pH):   %s   4.51
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

IFHDCFEQGC DASIMIASNG SNKAKKDPPD NLSLAGDGFD TVITAKAAID AVPNCRNNVS CADILTMATR DVVALAGGPY YPLELERLNG LSSTAAS*TR MLPKPELE 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. Very small peroxidase fragment and stop codon. Part of 5' sequence of this EST does not show any similarity with peroxidase sequences.