Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
361 (333) |
| PWM (Da): |
39781.67 (36557.0) |
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| PI (pH): |
7.5 (7.25) |
Peptide Signal: |
cut: 29 range:29-361 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAEEGRRMCM RPVQLLALAT MAVHLVVASS YQIENSPVIT QAECSDGGRF TFPKPMLTAD FYNHSCPEAT TQISNYIKKL VKNDSSLPAA FIRLQFHDCF VRGCDASVLL HSIPGNESEL
EGIPNKNSLR GLHLVDQLKA ELEDICPGVV SCADLIALMA RDSLQAIGGP SYRVLLGRRD GMISLKDEAN SLPSPFQNYS ALLHSFSSLG FDSKEMAVLS GAHSIGFSHC RFIAGRLYNF
SRQVGAFDPT LDPEYAHRMR KRCPPDRSDV FFAMDPSGKH PGRTFDSSYF RNLLRNRGAF TSDSTLTSTP EGRAHVLEMA SPQNTVFFEA FGKAMEKMGE LGVMTGAEGE VRKRCTIRNG
F*
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Retrieve as FASTA
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| Remarks |
Incorrect prediction from Phytozome (extra short exon in 5'). No expression. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCGAGG AAGGTCGGCG GATGTGCATG CGTCCTGTGC AGTTGCTTGC TTTGGCAACG ATGGCGGTAC ACCTAGTGGT AGCTTCGTCG TATCAGATCG AGAATTCTCC AGTTATCACT
CAAGCAGAAT GCTCAGACGG GGGACGTTTT ACTTTTCCAA AGCCAATGTT AACAGCCGAT TTTTACAACC ATAGTTGCCC GGAAGCAACG ACGCAGATTT CCAACTACAT AAAAAAATTA
GTGAAAAACG ATTCTTCTCT TCCTGCTGCA TTCATCCGGC TACAATTCCA TGACTGCTTC GTCCGAGTAA GTTCCGATAC ACCACTCCAC AACATTGACA TTATAGATAG TTGCCACCCT
TGAAAAGGGC GGCATGTTCT GAGAGTCTTT CACAATAATC TGCCGAATCC TTTAATCTTT CAAGTTGATG TTTCAAAATG AGAGCTCGTA GTCAACTCAG TCTGATGGAG GATACCTTCG
TCCTGTAGGG CTGTGATGCA TCGGTTTTGC TCCATTCAAT TCCTGGCAAC GAGTCAGAGC TAGAAGGAAT TCCCAACAAG AACTCCTTGA GAGGGCTTCA TCTTGTGGAC CAGTTGAAAG
CTGAACTCGA AGACATCTGT CCGGGGGTTG TTTCTTGTGC TGATCTTATC GCGCTCATGG CACGTGACTC ACTTCAAGCA GTAAGTTTCG AAAATTCTGT TCCACAAAGT TTGACCTTAA
TTCCACTCAA TCTCCGAGCA AGTGTACGCC TTTGTTCCCG AGTCTGATCT GAAACTGAGC AGTGGTTTAA GAAAATTGTA TACAAAGAGC GACGATTATT CTTTTTCACC GACATTCGAT
GTTCAGTCTA TACGTCGAGC TTGTATGCAC GAGTTATGAG AGGATTAGTG TTATCTTCAG AATCGTATCA CAAGATCAAG TCCGCAGTAT CTGACTCAAA TGCTTCACGT CCGTGCAGAT
TGGGGGTCCC TCTTATAGAG TTCTTCTGGG TCGGAGAGAT GGGATGATAT CGTTGAAAGA TGAAGCCAAT TCTCTTCCGT CGCCTTTTCA AAATTATTCA GCACTCTTAC ATTCCTTCTC
ATCTCTCGGG TTCGACTCAA AGGAGATGGC GGTGCTTTCC GGTGAGAGAT GTTTATGACA GCAGAAAACA AATTCATTGG AATTTACTCT AGTCCTGCAG AATAGTTCAC GAGAGTAGAG
AGCTGAAAAT TTTCGGACCA CAGAAAGTTG CCAGAAGCAG CTATTAACGT CGTCCCCGTT TGGCAGGTGC TCACTCCATC GGGTTTTCAC ACTGCCGTTT CATTGCTGGG CGTCTCTATA
ATTTCTCGAG ACAGGTCGGG GCCTTCGATC CGACATTGGA TCCAGAATAC GCTCACCGAA TGAGGAAGAG ATGCCCACCA GATCGGAGCG ACGTCTTTTT TGCAATGGAT CCTTCAGGAA
AACATCCGGG AAGAACTTTC GATTCATCGT ACTTCAGGAA TTTGCTGCGC AACAGAGGTG CATTTACGTC TGACTCGACG CTCACGAGCA CTCCCGAGGG CCGAGCACAT GTGCTAGAGA
TGGCTTCCCC GCAAAATACA GTATTTTTTG AAGCATTTGG CAAGGCGATG GAAAAGATGG GCGAGCTCGG TGTTATGACT GGCGCAGAGG GCGAGGTTCG TAAGAGGTGC ACGATTCGAA
ACGGATTCTA GTCCTAGACT TGCTCACTCC TGTATAATAC TCACTCACTT GAGCTGTTGA CTCCAAAAGC GAGACATTCA GCTCTTCAGG TCAGTCGGTC GGTCGAATTA TATGGAAATC
AACAGCTTTT CTGAGTTGCA CCACCAATCC CAGATACGTA AAGTCGAAGA GTTTTGTCCC TCAGCAATTC TCAGCTTTGA AAGCGTAAAC TTGTAATTAT CCTCCTGAGG CCACTCTGGA
ATGCCATGAG CAGTATTAAG TACAGCTGTG CGCGAGAGAG AGAGAGAGCT TGATATGAGA GCCCCTCATG ATCGGACATT TTGCAATGTC CAATCATGAG GGGCTTCTAC TCAAGACTAG
TCTATCAGTA GTCTCTTAGA TAGTCAATCC ACTCAAAGGC AGGACGATCC ATGGCTTATA TATGTAGAAA GACTAGTAAA GCAATGGTTA GTGTACAGAT ACATACATTC CCTTCGTCTC
TCGAACTCCA ATATTCTCAA CAAGTTTGCT CTCAATGATG GAGCCGAGCC ACTAACCGCG TCTGTCTCCT CGTAGTAAAG TCATATCCGT ATTCGTCTTC CCTTGTTCTC ATGTGCAGTG
TTGGTATGCA TCACCTTCAC CTGGCGGCGG CTCTCTTCAT CCATACTTTC CGTCACAGTC TAGACCTTTA CGACACGTTC TATTATATAC GAAGCCCAAG GCCAACGTTG GCTTCTTAAG
TCCACAACTG ATTTCGGTCA TGAGTACAGG AATAAAGGCG ACTCGTATAT CGAAAGAACT AGTCGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCGAGG AAGGTCGGCG GATGTGCATG CGTCCTGTGC AGTTGCTTGC TTTGGCAACG ATGGCGGTAC ACCTAGTGGT AGCTTCGTCG TATCAGATCG AGAATTCTCC AGTTATCACT
CAAGCAGAAT GCTCAGACGG GGGACGTTTT ACTTTTCCAA AGCCAATGTT AACAGCCGAT TTTTACAACC ATAGTTGCCC GGAAGCAACG ACGCAGATTT CCAACTACAT AAAAAAATTA
GTGAAAAACG ATTCTTCTCT TCCTGCTGCA TTCATCCGGC TACAATTCCA TGACTGCTTC GTCCGAGGCT GTGATGCATC GGTTTTGCTC CATTCAATTC CTGGCAACGA GTCAGAGCTA
GAAGGAATTC CCAACAAGAA CTCCTTGAGA GGGCTTCATC TTGTGGACCA GTTGAAAGCT GAACTCGAAG ACATCTGTCC GGGGGTTGTT TCTTGTGCTG ATCTTATCGC GCTCATGGCA
CGTGACTCAC TTCAAGCAAT TGGGGGTCCC TCTTATAGAG TTCTTCTGGG TCGGAGAGAT GGGATGATAT CGTTGAAAGA TGAAGCCAAT TCTCTTCCGT CGCCTTTTCA AAATTATTCA
GCACTCTTAC ATTCCTTCTC ATCTCTCGGG TTCGACTCAA AGGAGATGGC GGTGCTTTCC GGTGCTCACT CCATCGGGTT TTCACACTGC CGTTTCATTG CTGGGCGTCT CTATAATTTC
TCGAGACAGG TCGGGGCCTT CGATCCGACA TTGGATCCAG AATACGCTCA CCGAATGAGG AAGAGATGCC CACCAGATCG GAGCGACGTC TTTTTTGCAA TGGATCCTTC AGGAAAACAT
CCGGGAAGAA CTTTCGATTC ATCGTACTTC AGGAATTTGC TGCGCAACAG AGGTGCATTT ACGTCTGACT CGACGCTCAC GAGCACTCCC GAGGGCCGAG CACATGTGCT AGAGATGGCT
TCCCCGCAAA ATACAGTATT TTTTGAAGCA TTTGGCAAGG CGATGGAAAA GATGGGCGAG CTCGGTGTTA TGACTGGCGC AGAGGGCGAG GTTCGTAAGA GGTGCACGAT TCGAAACGGA
TTCTAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCGAGG AAGGTCGGCG GATGTGCATG CGTCCTGTGC AGTTGCTTGC TTTGGCAACG ATGGCGGTAC ACCTAGTGGT AGCTTCGTCG TATCAGATCG AGAATTCTCC AGTTATCACT
CAAGCAGAAT GCTCAGACGG GGGACGTTTT ACTTTTCCAA AGCCAATGTT AACAGCCGAT TTTTACAACC ATAGTTGCCC GGAAGCAACG ACGCAGATTT CCAACTACAT AAAAAAATTA
GTGAAAAACG ATTCTTCTCT TCCTGCTGCA TTCATCCGGC TACAATTCCA TGACTGCTTC GTCCGAGGCT GTGATGCATC GGTTTTGCTC CATTCAATTC CTGGCAACGA GTCAGAGCTA
GAAGGAATTC CCAACAAGAA CTCCTTGAGA GGGCTTCATC TTGTGGACCA GTTGAAAGCT GAACTCGAAG ACATCTGTCC GGGGGTTGTT TCTTGTGCTG ATCTTATCGC GCTCATGGCA
CGTGACTCAC TTCAAGCAAT TGGGGGTCCC TCTTATAGAG TTCTTCTGGG TCGGAGAGAT GGGATGATAT CGTTGAAAGA TGAAGCCAAT TCTCTTCCGT CGCCTTTTCA AAATTATTCA
GCACTCTTAC ATTCCTTCTC ATCTCTCGGG TTCGACTCAA AGGAGATGGC GGTGCTTTCC GGTGCTCACT CCATCGGGTT TTCACACTGC CGTTTCATTG CTGGGCGTCT CTATAATTTC
TCGAGACAGG TCGGGGCCTT CGATCCGACA TTGGATCCAG AATACGCTCA CCGAATGAGG AAGAGATGCC CACCAGATCG GAGCGACGTC TTTTTTGCAA TGGATCCTTC AGGAAAACAT
CCGGGAAGAA CTTTCGATTC ATCGTACTTC AGGAATTTGC TGCGCAACAG AGGTGCATTT ACGTCTGACT CGACGCTCAC GAGCACTCCC GAGGGCCGAG CACATGTGCT AGAGATGGCT
TCCCCGCAAA ATACAGTATT TTTTGAAGCA TTTGGCAAGG CGATGGAAAA GATGGGCGAG CTCGGTGTTA TGACTGGCGC AGAGGGCGAG GTTCGTAAGA GGTGCACGAT TCGAAACGGA
TTCTAGTCCT AGACTTGCTC ACTCCTGTAT AATACTCACT CACTTGAGCT GTTGACTCCA AAAGCGAGAC ATTCAGCTCT TCAGGTCAGT CGGTCGGTCG AATTATATGG AAATCAACAG
CTTTTCTGAG TTGCACCACC AATCCCAGAT ACGTAAAGTC GAAGAGTTTT GTCCCTCAGC AATTCTCAGC TTTGAAAGCG TAAACTTGTA ATTATCCTCC TGAGGCCACT CTGGAATGCC
ATGAGCAGTA TTAAGTACAG CTGTGCGCGA GAGAGAGAGA GAGCTTGATA TGAGAGCCCC TCATGATCGG ACATTTTGCA ATGTCCAATC ATGAGGGGCT TCTACTCAAG ACTAGTCTAT
CAGTAGTCTC TTAGATAGTC AATCCACTCA AAGGCAGGAC GATCCATGGC TTATATATGT AGAAAGACTA GTAAAGCAAT GGTTAGTGTA CAGATACATA CATTCCCTTC GTCTCTCGAA
CTCCAATATT CTCAACAAGT TTGCTCTCAA TGATGGAGCC GAGCCACTAA CCGCGTCTGT CTCCTCGTAG TAAAGTCATA TCCGTATTCG TCTTCCCTTG TTCTCATGTG CAGTGTTGGT
ATGCATCACC TTCACCTGGC GGCGGCTCTC TTCATCCATA CTTTCCGTCA CAGTCTAGAC CTTTACGACA CGTTCTATTA TATACGAAGC CCAAGGCCAA CGTTGGCTTC TTAAGTCCAC
AACTGATTTC GGTCATGAGT ACAGGAATAA AGGCGACTCG TATATCGAAA GAACTAGTCG A
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Retrieve as FASTA
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