Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
325 (302) |
PWM (Da): |
35243.58 (32789.2) |
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PI (pH): |
4.52 (4.45) |
Peptide Signal: |
cut: 24 range:24-325 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MSPTSVRSVV LLLLAVAVVV SDAQLQLSET FYDATCPQAA SIVQQKVNAF VDADRGLAAA LMRLHFHDCF VRGCDGSVLL NSTESMLTEK EALLNKGSLR GFEQIDEIKM ELECACPGVV
SCADILALVA RDATAKVGGT SWPVFLGRID GGASFADEVN SSLPERTDNF TQLVARFARV GLDARDMVIL SGGHSIGQVH CGAFFERLYN FQGLNITDPS MDPEFAAMLK VQCPPTKPFG
FMALDATNGT FDSAYYLDLL TNKGLLESDV ALLSDPLGVE YAIRAVQDPM AFLNEFGWAM IKMGAIPALE PYGWRRHCAF VEPKF*
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Retrieve as FASTA
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Remarks |
End of exon 4 is missing due to N and scaffold border. No EST found. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTCTCCTA CCAGTGTGAG ATCGGTAGTC CTTCTTCTGC TCGCGGTAGC AGTAGTTGTT TCGGACGCGC AGTTACAGCT GTCGGAAACG TTCTATGATG CCACATGTCC ACAAGCCGCA
TCCATCGTCC AACAGAAGGT GAATGCATTT GTGGATGCCG ATCGAGGCCT CGCTGCAGCT TTGATGCGAC TTCATTTCCA CGATTGCTTC GTCCGGGTAC GTCAACTCGT AATGCTGAAA
GCGATGCATG CAAACGTATA CTTGTTCAAG CATAAGACTG GAAGACAACC TCAATGCTGA CCAGTAGCGC TATAACTCAT ATGCGAACTT TGTATTATTG ACGACATACA GGGTTGCGAT
GGATCCGTCC TCCTCAATTC TACCGAGTCT ATGCTGACCG AGAAAGAAGC ATTGCTCAAC AAAGGTTCTT TGAGGGGATT CGAGCAGATA GACGAAATAA AGATGGAGCT GGAGTGCGCA
TGCCCAGGTG TGGTATCTTG TGCCGATATT TTAGCATTGG TCGCCCGAGA CGCTACCGCT AAGGTACGAA TTCTGGTGAT GGACTTTGCT ACGAATCTAG CATCACTCAT AAAATAGCAT
ATTATATGCA AGCCATATCA CCTGATTCAA AAATGCGTGA ATGGTCTTTT GAGTGCTCGG AAAGGACAAA CTAGCAGTGG ACAGTATTCA TGGGCATATT GGCCTTTGCA GGTTGGTGGC
ACTAGCTGGC CCGTGTTTCT GGGCCGTATA GACGGAGGAG CTTCATTCGC CGATGAGGTC AACAGTAGTT TACCTGAACG TACAGACAAC TTCACGCAAC TCGTCGCCCG GTTCGCCAGA
GTTGGACTCG ATGCCAGAGA CATGGTTATC CTATCAGGTA ACTTGACGAG TGCAAAATGA TCTCTCATGT GCCGCTTCAG CTACAAAATG CTGTATTGTA GATGTAATGA AGGATTTGAA
GCCCTGAAAA TACACTCGAA GTCCAAGAGA GTAAAATATT GATGTTGCTT CCCCACTACA TTCACTCAAA TGCAGGAGGA CACTCTATTG GACAAGTTCA TTGCGGCGCA TTCTTCGAGC
GCCTCTACAA CTTCCAGGGA CTCAACATCA CTGATCCGTC CATGGACCCT GAGTTCGCTG CCATGCTCAA GGTCCAGTGC CCGCCGACCA AGCCCTTCGG ATTCATGGCT CTGGACGCCA
CCAACGGCAC CTTCGACTCC GCGTACTACT TGGACCTGCT CACGAACAAG GGCCTGCTGG AGTCCGACGT GGCGCTCTTG AGCGACCCTC TGGGCGTGGA ATACGCCATC AGAGCGGTGC
AAGATCCCAT GGCCTTCCTG AACGAGTTCG GATGGGCCAT GATCAAAATG GGCGCCATTC CTGCGCTCGA GCCCTACGGC TGGAGAAGAC ACTGCGCCTT TGTAGAACCA AAATTCTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTCTCCTA CCAGTGTGAG ATCGGTAGTC CTTCTTCTGC TCGCGGTAGC AGTAGTTGTT TCGGACGCGC AGTTACAGCT GTCGGAAACG TTCTATGATG CCACATGTCC ACAAGCCGCA
TCCATCGTCC AACAGAAGGT GAATGCATTT GTGGATGCCG ATCGAGGCCT CGCTGCAGCT TTGATGCGAC TTCATTTCCA CGATTGCTTC GTCCGGGGTT GCGATGGATC CGTCCTCCTC
AATTCTACCG AGTCTATGCT GACCGAGAAA GAAGCATTGC TCAACAAAGG TTCTTTGAGG GGATTCGAGC AGATAGACGA AATAAAGATG GAGCTGGAGT GCGCATGCCC AGGTGTGGTA
TCTTGTGCCG ATATTTTAGC ATTGGTCGCC CGAGACGCTA CCGCTAAGGT TGGTGGCACT AGCTGGCCCG TGTTTCTGGG CCGTATAGAC GGAGGAGCTT CATTCGCCGA TGAGGTCAAC
AGTAGTTTAC CTGAACGTAC AGACAACTTC ACGCAACTCG TCGCCCGGTT CGCCAGAGTT GGACTCGATG CCAGAGACAT GGTTATCCTA TCAGGAGGAC ACTCTATTGG ACAAGTTCAT
TGCGGCGCAT TCTTCGAGCG CCTCTACAAC TTCCAGGGAC TCAACATCAC TGATCCGTCC ATGGACCCTG AGTTCGCTGC CATGCTCAAG GTCCAGTGCC CGCCGACCAA GCCCTTCGGA
TTCATGGCTC TGGACGCCAC CAACGGCACC TTCGACTCCG CGTACTACTT GGACCTGCTC ACGAACAAGG GCCTGCTGGA GTCCGACGTG GCGCTCTTGA GCGACCCTCT GGGCGTGGAA
TACGCCATCA GAGCGGTGCA AGATCCCATG GCCTTCCTGA ACGAGTTCGG ATGGGCCATG ATCAAAATGG GCGCCATTCC TGCGCTCGAG CCCTACGGCT GGAGAAGACA CTGCGCCTTT
GTAGAACCAA AATTCTAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTCTCCTA CCAGTGTGAG ATCGGTAGTC CTTCTTCTGC TCGCGGTAGC AGTAGTTGTT TCGGACGCGC AGTTACAGCT GTCGGAAACG TTCTATGATG CCACATGTCC ACAAGCCGCA
TCCATCGTCC AACAGAAGGT GAATGCATTT GTGGATGCCG ATCGAGGCCT CGCTGCAGCT TTGATGCGAC TTCATTTCCA CGATTGCTTC GTCCGGGGTT GCGATGGATC CGTCCTCCTC
AATTCTACCG AGTCTATGCT GACCGAGAAA GAAGCATTGC TCAACAAAGG TTCTTTGAGG GGATTCGAGC AGATAGACGA AATAAAGATG GAGCTGGAGT GCGCATGCCC AGGTGTGGTA
TCTTGTGCCG ATATTTTAGC ATTGGTCGCC CGAGACGCTA CCGCTAAGGT TGGTGGCACT AGCTGGCCCG TGTTTCTGGG CCGTATAGAC GGAGGAGCTT CATTCGCCGA TGAGGTCAAC
AGTAGTTTAC CTGAACGTAC AGACAACTTC ACGCAACTCG TCGCCCGGTT CGCCAGAGTT GGACTCGATG CCAGAGACAT GGTTATCCTA TCAGGAGGAC ACTCTATTGG ACAAGTTCAT
TGCGGCGCAT TCTTCGAGCG CCTCTACAAC TTCCAGGGAC TCAACATCAC TGATCCGTCC ATGGACCCTG AGTTCGCTGC CATGCTCAAG GTCCAGTGCC CGCCGACCAA GCCCTTCGGA
TTCATGGCTC TGGACGCCAC CAACGGCACC TTCGACTCCG CGTACTACTT GGACCTGCTC ACGAACAAGG GCCTGCTGGA GTCCGACGTG GCGCTCTTGA GCGACCCTCT GGGCGTGGAA
TACGCCATCA GAGCGGTGCA AGATCCCATG GCCTTCCTGA ACGAGTTCGG ATGGGCCATG ATCAAAATGG GCGCCATTCC TGCGCTCGAG CCCTACGGCT GGAGAAGACA CTGCGCCTTT
GTAGAACCAA AATTCTAG
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Retrieve as FASTA
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