Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
291 (306) |
PWM (Da): |
31227.88 (33721.0) |
Transmb domain: |
i78-100o |
PI (pH): |
6.76 (7.76) |
Peptide Signal: |
cut: 26 range:26-331 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASALNRGNS LKVPLPKASL LTRTASFPTD SSQRVSGAFQ GPAATAPLMR GDTFKAGAST DSASVRWGSM KGAGKMAAST LKLAVLLFIG VYLYGAVSYA RSIRYPSRVV TTEMLYRRLE
EAGDTVPEHF HLYSCPQATF VVSELVNKFV TTDPNLAGGL EVLQFHDCFV RGCDASILLN STSATTPEKD ASPKADQESL RGFEQIDKIR AALEEACPDI VTCADILALV ARDPTLKAGG
PSWSVVLGRR EGFVFLEAEA KISLPSPLSN FSSLVQNFEL VKCTMDETSS Y*
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Retrieve as FASTA
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Remarks |
Pseudo from genomic. Incorrect prediction from Phytozome. End of exon 3 and exon 4 are missing. No expression data. Also pseudo in Mpolmon, Mpolpol and Mpal |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATTTAACACG AGATCAGCAG TCACGAGAAG CTCACTCCAA GTCGAGCTTT ATCAAAGTCA ACAGAGTATA ACTCGTAGTG CTCAAGTGAG GATGACATCT TAGTGACATC AGAGGTTGCT
ATATAACCTG TTCTTGCGAT TCAGTGTTCA CCAGCCTTAT ACTCTCCAGT GCAAAGCAAT CAATCTTGAC GGGTCCTCGT TTCGAGTAAG TCCCTCAGCA TAGACCTCCC TACCCGAAAC
AAATTCCCTC AGCTAAAACT CACTTGGACA CATAGTCCGA GACAAACTAT TACTCATAGG TCTGTGTCAC CTTGAAAATT GACACAGGAC GTGCTCTCGT GTTGAAGTAT GTGCTTTGTG
CTTTGAGCTT TGAGCTTTGA GCACATTTTC CTGCTTCGCA TATCTTCGAT ATTTGAATTT TGAAACTGTT ACAGCTTAGT TAATCCCTTG CGGAGGTCTG AGTACGTTTT TTCTTGTCTA
GATTATCTCT GACAGTTCGA AGGGTCGATA GCTGGAGCGT GTCTACATTT GTTCTCTCAT GTGCATGCTC AAGTTGGGTC TTTCGTAGCA GTGACATACA TGTATATGTG AGCTTCTGTG
CCGTTTTTCA GGTTTCTATT GCTAGTCGCC CCTTATCGTA TCACGACCAG AATGCTCCTA AGTTGAAATC GTTATCTGCA TCTGTGCAGC ATCGCTTCAA GTGACTACTT GAAGTTGAAT
TCTCGGTTGT TCCTTTTCGT GTAGCGAATG GTATCTTTCA CTGCATATTG TGGCTATTCA GGCCATCGTA CTCAACCTTT GCTCTTTACT TAGGTTTGAA TTCGCTTGTG CGCAGGAAGG
ACCTGGTCAC GGAGGCAAGA CCAGACCTCT CGAAAAGGTG GCATTCCGAT TCATTTCTGA CTCCGTATTT TGGAAGATAC CCACGACAAC TTTTGGGTAG AATCAGACAG CTAACGTATC
AAGTCTATAG AAGAGCCCGG ATTAGCAATG GCTTCCGCAT TGAACAGAGG GAACTCACTC AAGGTACCTT TACCCAAAGC ATCATTACTC ACTAGAACAG CGTCATTTCC GACGGATTCA
TCACAACGAG TTAGTGGTGC ATTCCAAGGA CCTGCAGCCA CGGCACCACT GATGCGAGGG GATACTTTCA AAGCAGGAGC GTCTACAGAT TCAGCTAGTG TAAGATGGGG GTCAATGAAA
GGAGCTGGAA AAATGGCTGC ATCAACGCTG AAGTTGGCAG TTCTACTATT TATTGGAGTC TACTTATATG GAGCAGTCAG TTATGCAAGG AGCATAAGAT ATCCCAGTCG AGTAGTGACG
ACGGAGATGC TATACAGAAG GTTGGAGGAA GCAGGGGATA CGGTCCCGGA GCACTTTCAT CTGTACTCTT GTCCCCAGGC TACTTTCGTT GTCAGTGAGC TGGTCAATAA GTTCGTTACT
ACAGATCCCA ATTTGGCAGG AGGATTAGAG GTTCTTCAAT TTCATGATTG TTTCGTCCGG GTGAGATCTC CTTCTCTTCG AGAGCATCGT CTCATCTCTC TTTTTTTTGT GTCCATAAAG
TATTTTCAGA ACGCATGCTT TTCTAGTCAA CGGATGAAGA TTTGTTAGTA CATTGATTGC AAAGCGGAAA GGATTTCAGA TACGCTTGAG ATGGATACGG AATCTGATGA GTTGAAAGAC
CTGTGTGACG TGACTGGAGG GAATCATGCA GTACTCCAAG TATGATTTTG ATTGATCCGC TTGCGGATGT GAACTTTCCT TGGACAGGGT TGTGATGCAT CAATTTTATT GAACTCTACA
TCTGCTACAA CACCAGAGAA GGATGCGTCA CCCAAAGCTG ATCAAGAATC GCTGAGAGGT TTCGAACAGA TAGACAAGAT CAGGGCTGCG CTTGAAGAAG CTTGCCCCGA CATTGTAACT
TGTGCAGATA TATTAGCGCT TGTCGCTCGT GATCCCACGC TAAAGGTGAG TGATCTTCGC AACATTACAT CTCTGAGATG CAACTCAATG GTAGTAACAA TGCATTCCCT TTGAAGTCTG
CGCAGGTCTT TGGAAATATC ACGTGGCATG TGAACTCACC ATTGCCTACA TTGCTGCTGC AGGCTGGAGG ACCAAGCTGG TCGGTGGTAT TGGGACGGAG AGAAGGCTTC GTATTTCTGG
AAGCCGAGGC GAAGATCAGC CTCCCCTCTC CGCTGTCCAA CTTTAGTAGT CTAGTGCAGA ATTTCGAATT AGTAAAATGT ACAATGGACG AAACTAGTAG TTACTAAGAT TTGGGAGTTG
GAGCAGGCAG GCCTTGCCAA GTACAGCTAA ATGGTCGATA TTCTTACAGA GCACGACGTT CATGGGGCAA ACAAAGTATT CACGATGTGA TTAGAGCTAG AGAATGAGTT CCGTGTAAAA
AGTGTGTTGT TTGAACACCT TTTCCGATTT AGCTCGAACT CCCACGCGCC TGTAGATTGC AATATCACTC ATTGTTCATC CAAAAAGCCC GGGAAGACTG GAAGCCTTCA TAAGTGTGGT
AGGTTCACGA CCGGGACATG AAGGTGGAGA TAACAACCAA TTCTTGACGG GAGATGTCAA TGCTGAGATT TTGGGACCAT TGCTTGGTCG ATTCGTTCGT GGTACAGTTA TGTAAATTTC
TTATTTGTTA GAGTGTTCAG CCAGAATCTC ACCACTCTTT CGCGGTGGAA ACATGTCAAT AAAAGTAGAG ACATAGCCTA AAATTTCT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCCG CATTGAACAG AGGGAACTCA CTCAAGGTAC CTTTACCCAA AGCATCATTA CTCACTAGAA CAGCGTCATT TCCGACGGAT TCATCACAAC GAGTTAGTGG TGCATTCCAA
GGACCTGCAG CCACGGCACC ACTGATGCGA GGGGATACTT TCAAAGCAGG AGCGTCTACA GATTCAGCTA GTGTAAGATG GGGGTCAATG AAAGGAGCTG GAAAAATGGC TGCATCAACG
CTGAAGTTGG CAGTTCTACT ATTTATTGGA GTCTACTTAT ATGGAGCAGT CAGTTATGCA AGGAGCATAA GATATCCCAG TCGAGTAGTG ACGACGGAGA TGCTATACAG AAGGTTGGAG
GAAGCAGGGG ATACGGTCCC GGAGCACTTT CATCTGTACT CTTGTCCCCA GGCTACTTTC GTTGTCAGTG AGCTGGTCAA TAAGTTCGTT ACTACAGATC CCAATTTGGC AGGAGGATTA
GAGGTTCTTC AATTTCATGA TTGTTTCGTC CGGGGTTGTG ATGCATCAAT TTTATTGAAC TCTACATCTG CTACAACACC AGAGAAGGAT GCGTCACCCA AAGCTGATCA AGAATCGCTG
AGAGGTTTCG AACAGATAGA CAAGATCAGG GCTGCGCTTG AAGAAGCTTG CCCCGACATT GTAACTTGTG CAGATATATT AGCGCTTGTC GCTCGTGATC CCACGCTAAA GGCTGGAGGA
CCAAGCTGGT CGGTGGTATT GGGACGGAGA GAAGGCTTCG TATTTCTGGA AGCCGAGGCG AAGATCAGCC TCCCCTCTCC GCTGTCCAAC TTTAGTAGTC TAGTGCAGAA TTTCGAATTA
GTAAAATGTA CAATGGACGA AACTAGTAGT TACTAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATTTAACACG AGATCAGCAG TCACGAGAAG CTCACTCCAA GTCGAGCTTT ATCAAAGTCA ACAGAGTATA ACTCGTAGTG CTCAAGTGAG GATGACATCT TAGTGACATC AGAGGTTGCT
ATATAACCTG TTCTTGCGAT TCAGTGTTCA CCAGCCTTAT ACTCTCCAGT GCAAAGCAAT CAATCTTGAC GGGTCCTCGT TTCGAGAAGG ACCTGGTCAC GGAGGCAAGA CCAGACCTCT
CGAAAAGGTG GCATTCCGAT TCATTTCTGA CTCCGTATTT TGGAAGATAC CCACGACAAC TTTTGGGTAG AATCAGACAG CTAACGTATC AAGTCTATAG AAGAGCCCGG ATTAGCAATG
GCTTCCGCAT TGAACAGAGG GAACTCACTC AAGGTACCTT TACCCAAAGC ATCATTACTC ACTAGAACAG CGTCATTTCC GACGGATTCA TCACAACGAG TTAGTGGTGC ATTCCAAGGA
CCTGCAGCCA CGGCACCACT GATGCGAGGG GATACTTTCA AAGCAGGAGC GTCTACAGAT TCAGCTAGTG TAAGATGGGG GTCAATGAAA GGAGCTGGAA AAATGGCTGC ATCAACGCTG
AAGTTGGCAG TTCTACTATT TATTGGAGTC TACTTATATG GAGCAGTCAG TTATGCAAGG AGCATAAGAT ATCCCAGTCG AGTAGTGACG ACGGAGATGC TATACAGAAG GTTGGAGGAA
GCAGGGGATA CGGTCCCGGA GCACTTTCAT CTGTACTCTT GTCCCCAGGC TACTTTCGTT GTCAGTGAGC TGGTCAATAA GTTCGTTACT ACAGATCCCA ATTTGGCAGG AGGATTAGAG
GTTCTTCAAT TTCATGATTG TTTCGTCCGG GGTTGTGATG CATCAATTTT ATTGAACTCT ACATCTGCTA CAACACCAGA GAAGGATGCG TCACCCAAAG CTGATCAAGA ATCGCTGAGA
GGTTTCGAAC AGATAGACAA GATCAGGGCT GCGCTTGAAG AAGCTTGCCC CGACATTGTA ACTTGTGCAG ATATATTAGC GCTTGTCGCT CGTGATCCCA CGCTAAAGGC TGGAGGACCA
AGCTGGTCGG TGGTATTGGG ACGGAGAGAA GGCTTCGTAT TTCTGGAAGC CGAGGCGAAG ATCAGCCTCC CCTCTCCGCT GTCCAACTTT AGTAGTCTAG TGCAGAATTT CGAATTAGTA
AAATGTACAA TGGACGAAAC TAGTAGTTAC TAAGATTTGG GAGTTGGAGC AGGCAGGCCT TGCCAAGTAC AGCTAAATGG TCGATATTCT TACAGAGCAC GACGTTCATG GGGCAAACAA
AGTATTCACG ATGTGATTAG AGCTAGAGAA TGAGTTCCGT GTAAAAAGTG TGTTGTTTGA ACACCTTTTC CGATTTAGCT CGAACTCCCA CGCGCCTGTA GATTGCAATA TCACTCATTG
TTCATCCAAA AAGCCCGGGA AGACTGGAAG CCTTCATAAG TGTGGTAGGT TCACGACCGG GACATGAAGG TGGAGATAAC AACCAATTCT TGACGGGAGA TGTCAATGCT GAGATTTTGG
GACCATTGCT TGGTCGATTC GTTCGTGGTA CAGTTATGTA AATTTCTTAT TTGTTAGAGT GTTCAGCCAG AATCTCACCA CTCTTTCGCG GTGGAAACAT GTCAATAAAA GTAGAGACAT
AGCCTAAAAT TTCT
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Retrieve as FASTA
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