View Redoxidase 1473

Entry information : HaPrx04 (HanXRQChr16g0531731)

Entry ID	1473
Creation	2005-07-12 (Christophe Dunand)
Last sequence changes	2016-04-27 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaPrx04 (HanXRQChr16g0531731)

Name (synonym)

HaPrx04 (HanXRQChr16g0531731)

Class

Class III peroxidase [Orthogroup: Prx015]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaPrx04 start..stop	S start..stop
HaPrx63	540	0	16..312	16..313
LsPrx43	533	0	1..298	4..301
HaPrx66	510	0	1..312	1..314
PpePrx30	496	6.49e-179	3..312	6..318

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1473' 'join(182142417..182142611,182142697..182142885,182142963..182143125,182144531..182144922)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	182142417..182142611	193	N° 2	182142697..182142885	187	N° 3	182142963..182143125	161	N° 4	182144531..182144922	390
join(182142417..182142611,182142697..182142885,182142963..182143125,182144531..1 82144922)

Literature and cross-references HaPrx04 (HanXRQChr16g0531731)

Literature	Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project Unpublished (2002). Genoplante
DNA ref.	HanXRQ genome: HanXRQChr16 (182142417..182144922)
Cluster/Prediction ref.	HanXRQ: HanXRQChr16g0531731

Protein sequence: HaPrx04 (HanXRQChr16g0531731)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	312 (293)
PWM (Da):	33507.33 (31553.3)
PI (pH):	10.06 (10.06)	Peptide Signal:	cut: 20 range:20-312

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSALLASLLIFSLFTSATSLSSNYYAKTCPNVESLVRKAVRDAAT
SDKKVPAALLRMHFHDCFIRGCDASVLLDSKGKNKAEKDGPPNISLHAFYVIDNAKKAVESACPGIVSCADILALAARDSVVLSGGPSWDVPKGRKDGRTSLASETLQLPFPTFNISQLQKSFAQRGLSLDDLVALSGGH
TLGFSHCSSFKSRIHNFNSVTDVDPSLNPSFAASLKKICPVKNAKNAGVPMDPSSTSFDNKYYKLIFQKKVLFSSDKALLDLPKTRNLAAKFAGSKYAFTNAFVNSMIKMSSITGGQEVR
KNCRVVN

Retrieve as FASTA

Remarks

Complete sequence from genomic and 2 ESTs.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCTGCATTGTTAGCCTCACTACTCATTTTCTCGTTGTTCACTTCCGCAACTTCACTAAGCTCAAACTACTATGCGAAAACATGCCCTAATGTCGAATCACTCGTCAGAAAAGCAGTG
AGGGACGCAGCGACAAGTGACAAGAAAGTCCCTGCGGCGTTGCTAAGGATGCACTTCCATGACTGTTTCATAAGGGGGTAAAAAAAAATTATTTATTTTATGTTTTAAGTTGCATGATTT
TGTTTGTGTCGGTGACTTAATTCGGTTTGATATTTTTGGAAGGGGTGTGATGCTTCTGTTTTGCTGGATTCTAAGGGAAAAAACAAAGCTGAAAAGGACGGGCCACCAAATATTTCGTTG
CATGCATTTTATGTCATCGATAATGCTAAGAAAGCAGTCGAATCTGCGTGCCCAGGAATAGTTTCGTGTGCTGATATCTTAGCTTTAGCGGCTAGGGATTCCGTCGTGCTGTGGTAATAA
CAAAAGTTATATTGTTTGAATATTAGTTTAGTAAATATAAAAATATCATGATTAATTGTGTTTTATACAGTCTGGAGGGCCATCATGGGATGTTCCTAAAGGAAGAAAAGATGGAAGAAC
ATCATTAGCAAGTGAAACATTACAACTCCCCTTTCCTACCTTCAATATATCCCAACTTCAAAAAAGCTTTGCTCAAAGAGGTCTATCTCTAGATGACCTAGTGGCACTTTCAGAGGTAAC
ATCAGCTGTCAAAACTTCCGGTGGTCATCGAACCGACCACCTTACAGGTTCATCGGTTGGACCAGATTTAAAAACCGGATGATATAACTAATTTTGAATAATAGTTATATAGGGGAAGGT
TCAAATGAAAACCACTAGTTATTGTGAAAACTCGAAAACTAATTAAAAAAAGCCAAAAAAACATACAAAAAAAAAATTTTTTTAATTTTTTTTTTTTTGCAATCAAAATTTCGCAGGTTT
TTTAATATAAAAAAAAATTTCAAAAAAAAAATTTTTGTGTAGTGCACATGTGTAATACTGCACATATGTATGTGTACTACACATGTGTATTATTACACATGTGCACTACACAAAATTTTT
TTTTTTTTTTTTTTTTGAAAAAAAGTTTTTTTTATATATAAAAACTAGCGATTTTTATAAAAAAAAATTGAAAAAAAAAATTGTGTGTTTTTTATGCTTTTTTTAGTTAGTTTTCGAGTT
TTCACAATAAAAGTGGTTTTCATTTGAACCATCCCCTAGTTATATATTACATTAAGTGTATATAGCATATTAAATTGAATTGAAAGTTTAATAAGAGCATTCACATCCAAATAACTAAAT
TATGTGTGTGGTGTTTTTAAAATATAAAAAGTATAAAAAGTGGTTGTGAGTGGAGGAGAGAGAAAATGTTACTGTTCATCTGTATATTTGGGGGGACACTATTCACCCCCTATAATTTTT
TAATATATTTTGAAAGTGGTTGTGAGTGGAGGATAGAGAAAAGATAATGATAAATGTATAAAAATTATTATTTAATTGAAAAGGAGAGAGAAAATGTAGTGTTTTTTAGTGTAATTTAGG
GTGAAAATATGGTGGATTGAATGTGAATGCTCTAAAAGAATGTTGTCGTGTTAGCTATATTTAAAAAATAAATAATTTATATATTGTTTTCTTCTTAAAAGATATAATAAAAGTTGTAAT
GAATAAAAGAGATTAAATGTTTTTTGAGAGTATTCAGTTTATATATCTAATAATGCAACATCAATTTCTTCCTAGAAGAGTTGAAATTCCGCGAGCTATAAAATATTTTATTTTTTTTTA
TTTATTTATTTATTTTTTTTTTTTTTATTTTTTTGCAAGAAGTAAAAAATTCAAAACTGGTCCAACCCTACCAAACTGGCCGGTCCGGTGTGGTCATGAAAACATAATAGAGGTGGTAAA
ATGTGCGGGTGAAGTAGGTTGGGTAACAAATCACAATGGGTGATATTAGATACAAACGGGCCGGATTGGCCTGGAACGCTTTTGGTACAAACATATTTAATCTTTTATACAAATAACGAG
TGTCACATACAATAAGACATTATATTATTTAACTAATAATCTTTATACATAAAAATTTTGTGCATTTACCTTGTTTTCAGGTGGTCATACTCTTGGTTTCTCCCATTGCTCATCATTCAA
AAGCCGAATCCACAACTTCAACTCAGTAACTGATGTTGACCCGTCACTCAACCCTTCATTTGCCGCAAGTTTAAAGAAAATTTGTCCAGTCAAAAACGCAAAGAACGCAGGAGTTCCAAT
GGATCCTTCTTCTACAAGTTTCGATAATAAATACTACAAACTTATTTTCCAAAAAAAAGTCTTATTTTCTTCGGATAAAGCTTTGCTTGATTTGCCGAAAACTAGAAATCTGGCAGCAAA
GTTTGCGGGTTCAAAATACGCATTCACAAATGCATTTGTAAACTCCATGATCAAGATGAGTAGCATTACAGGTGGTCAAGAGGTCAGAAAGAACTGTAGGGTCGTAAATTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA