Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
327 (301) |
| PWM (Da): |
35759.6 (32815.1) |
Transmb domain: |
i7-24o |
| PI (pH): |
4.38 (4.39) |
Peptide Signal: |
cut: 27 range:27-327 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASSSQWETF LSFILFFVVA AVVAEAQLST QFYDSTCPQA ASIVQAKVDA FVEADRGLAA ALMRLHFHDC FVRGCDGSVL LNSTDPNSLT EKSALLNNNS LRGFEQIDEI KWELECACPG
VVSCADILAL VARDATVKLG GWSWPVFLGR IDGAGSFADE VNGSLPERRD NFTKLVETFA KVGLDAKDMI ILSGGHSIGQ VHCGAFFERL YNFQGLNITD PSMDPEFAAM LKAQCPQTRP
FDFMALDATN GTFDSTYYLD LLTNKGLLES DVALLSDPLG VEYAIKAVQD PNTFLFEFGM AMIKMGNIPA SDPYGWRKHC AFTEPKL*
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic and RNa seq. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCAT CATCTCAATG GGAGACGTTT CTTTCCTTCA TCCTTTTCTT CGTAGTCGCA GCAGTCGTTG CTGAGGCGCA ACTGTCAACT CAATTCTATG ACTCCACCTG TCCACAAGCC
GCATCTATAG TGCAAGCAAA GGTTGATGCG TTCGTTGAGG CTGATCGAGG ATTGGCAGCC GCTCTGATGC GTCTCCACTT TCATGACTGC TTCGTGCGAG TAAGAGTTGC TCCGTCATTT
AGCCTGGATA AAGAAATAAC TTTTGATATT CCAGCTAAAT TCTCTCTTAT CTGCTTATGA ACTTGCAAGC GGTATTATTA TAAATCATCG CACGTGTGAA ATATGAACGG TTAGGATTCA
TCATTGTATC CATCTTTGTA GAGAAACAGC TCTCTAATCA GCATGATATT CTCCAGAATA TGAGTCGTTT CCATCTATTA GCTCTTACTT CGACTTGACT GAATTCCTTT GTGTATCTGA
AGATAAAGTA ATTCGACTCT ATTCTATGGG TCCACTCTTT TGGTGCAGGG CTGTGATGGA TCCGTGCTTC TCAACTCAAC AGATCCTAAT AGTCTGACTG AAAAGTCTGC GCTGTTAAAC
AACAATTCTC TCAGAGGATT CGAACAAATC GATGAGATCA AATGGGAGCT GGAATGTGCA TGCCCAGGTG TTGTATCATG TGCAGATATT TTAGCTCTGG TGGCCCGTGA TGCGACCGTG
AAGGTTCAAT ACCGATCCTT TCTCCTTCTT CTGATTTGAT CGATGTGCTT ACTAATATCA TACTCATCGT TATACGTCCT GAGGTCTGTA CTGTTCTAAA GGGCGAATAT ATAAGTTACG
TCAAATGAAA GCGCTCACTA GGAAGGGCAC ATCGATGGTC TAATGATTTA CGAAAATATC CCTCTTGTTA TCTGCACAGC TTGGTGGCTG GAGCTGGCCA GTATTTCTGG GACGCATTGA
TGGTGCAGGA TCATTTGCGG ATGAGGTCAA TGGCAGCTTG CCTGAACGGA GGGATAACTT TACTAAACTT GTCGAAACCT TTGCAAAAGT TGGACTTGAT GCTAAGGATA TGATCATCCT
CTCAGGTAAG ACTGCTCGAA TTACATTCTC TAACTCTAAC GTCGGAGAAA TTTACACCGC AGCCAGAACT AACTTCAGAA GGCCACGTGC TTGAAAGCTT GAATTTTCAA GCTCAGTGAC
TCCTGCATCG TTTCCATATG AAGGATACAG ATTAGCTGAT TTCTCTATTC TTGAATGCAC CTGCAGGTGG ACACTCTATT GGACAAGTCC ACTGTGGCGC ATTCTTCGAG CGTCTGTACA
ATTTCCAAGG TCTTAACATT ACAGATCCAT CAATGGACCC TGAATTTGCT GCCATGCTCA AGGCTCAGTG CCCTCAGACC AGGCCTTTCG ACTTCATGGC ATTGGATGCC ACCAACGGCA
CCTTCGATTC TACTTACTAC TTGGATCTTT TGACCAACAA AGGTCTACTT GAGTCGGACG TGGCACTTTT GAGCGATCCT TTGGGTGTGG AGTATGCCAT CAAAGCTGTG CAAGATCCAA
ACACCTTTCT GTTTGAGTTC GGAATGGCAA TGATCAAAAT GGGCAACATT CCAGCTAGCG ATCCTTACGG CTGGAGAAAG CATTGCGCCT TCACCGAGCC CAAGTTGTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCAT CATCTCAATG GGAGACGTTT CTTTCCTTCA TCCTTTTCTT CGTAGTCGCA GCAGTCGTTG CTGAGGCGCA ACTGTCAACT CAATTCTATG ACTCCACCTG TCCACAAGCC
GCATCTATAG TGCAAGCAAA GGTTGATGCG TTCGTTGAGG CTGATCGAGG ATTGGCAGCC GCTCTGATGC GTCTCCACTT TCATGACTGC TTCGTGCGAG GCTGTGATGG ATCCGTGCTT
CTCAACTCAA CAGATCCTAA TAGTCTGACT GAAAAGTCTG CGCTGTTAAA CAACAATTCT CTCAGAGGAT TCGAACAAAT CGATGAGATC AAATGGGAGC TGGAATGTGC ATGCCCAGGT
GTTGTATCAT GTGCAGATAT TTTAGCTCTG GTGGCCCGTG ATGCGACCGT GAAGCTTGGT GGCTGGAGCT GGCCAGTATT TCTGGGACGC ATTGATGGTG CAGGATCATT TGCGGATGAG
GTCAATGGCA GCTTGCCTGA ACGGAGGGAT AACTTTACTA AACTTGTCGA AACCTTTGCA AAAGTTGGAC TTGATGCTAA GGATATGATC ATCCTCTCAG GTGGACACTC TATTGGACAA
GTCCACTGTG GCGCATTCTT CGAGCGTCTG TACAATTTCC AAGGTCTTAA CATTACAGAT CCATCAATGG ACCCTGAATT TGCTGCCATG CTCAAGGCTC AGTGCCCTCA GACCAGGCCT
TTCGACTTCA TGGCATTGGA TGCCACCAAC GGCACCTTCG ATTCTACTTA CTACTTGGAT CTTTTGACCA ACAAAGGTCT ACTTGAGTCG GACGTGGCAC TTTTGAGCGA TCCTTTGGGT
GTGGAGTATG CCATCAAAGC TGTGCAAGAT CCAAACACCT TTCTGTTTGA GTTCGGAATG GCAATGATCA AAATGGGCAA CATTCCAGCT AGCGATCCTT ACGGCTGGAG AAAGCATTGC
GCCTTCACCG AGCCCAAGTT GTAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AGGAAGCACA CGAGCTCGTC TCGGATCGTC ATCCACGGCC TCTGCCTCGA AAGTGGTTTT GACCCTAGAG TTTTAGTGGT CAGACTACTT TCGAGAAGGT TTGAGTTAAA GTTTTGAGAG
TTGTCTATCA AAGCCGACGA GAAAAGTTAT AAGATTCGAC AGCCTATCAT CAAATGGCTT CATCATCTCA ATGGGAGACG TTTCTTTCCT TCATCCTTTT CTTCGTAGTC GCAGCAGTCG
TTGCTGAGGC GCAACTGTCA ACTCAATTCT ATGACTCCAC CTGTCCACAA GCCGCATCTA TAGTGCAAGC AAAGGTTGAT GCGTTCGTTG AGGCTGATCG AGGATTGGCA GCCGCTCTGA
TGCGTCTCCA CTTTCATGAC TGCTTCGTGC GAGGCTGTGA TGGATCCGTG CTTCTCAACT CAACAGATCC TAATAGTCTG ACTGAAAAGT CTGCGCTGTT AAACAACAAT TCTCTCAGAG
GATTCGAACA AATCGATGAG ATCAAATGGG AGCTGGAATG TGCATGCCCA GGTGTTGTAT CATGTGCAGA TATTTTAGCT CTGGTGGCCC GTGATGCGAC CGTGAAGCTT GGTGGCTGGA
GCTGGCCAGT ATTTCTGGGA CGCATTGATG GTGCAGGATC ATTTGCGGAT GAGGTCAATG GCAGCTTGCC TGAACGGAGG GATAACTTTA CTAAACTTGT CGAAACCTTT GCAAAAGTTG
GACTTGATGC TAAGGATATG ATCATCCTCT CAGGTGGACA CTCTATTGGA CAAGTCCACT GTGGCGCATT CTTCGAGCGT CTGTACAATT TCCAAGGTCT TAACATTACA GATCCATCAA
TGGACCCTGA ATTTGCTGCC ATGCTCAAGG CTCAGTGCCC TCAGACCAGG CCTTTCGACT TCATGGCATT GGATGCCACC AACGGCACCT TCGATTCTAC TTACTACTTG GATCTTTTGA
CCAACAAAGG TCTACTTGAG TCGGACGTGG CACTTTTGAG CGATCCTTTG GGTGTGGAGT ATGCCATCAA AGCTGTGCAA GATCCAAACA CCTTTCTGTT TGAGTTCGGA ATGGCAATGA
TCAAAATGGG CAACATTCCA GCTAGCGATC CTTACGGCTG GAGAAAGCAT TGCGCCTTCA CCGAGCCCAA GTTGTAGGCC AGGCGGAGTT GACGACTATG TGCAATAACC ATGCTTGGTC
ATGCATTCTG CTTCTGAAGG CAGATGGTCA GAAAAAACAC ATTTTTGAAT CTATATTTAA AGCCCAAATT CATTCTAGAT TCGATGAATT TATGCTCTAT CCGATCGCTG TAGAGCTCTC
GGGTCGAGTA TTAGCTTTAG ATGGCAGGTC AAGCTGAATG TAGTCACAGA TTGCATGGGC TGCACATTGG TTTATAGTGT ACAGCAATGT TTAGGAAAAT TGATTGATAA ATAATGTCAT
CTATGACTAT AAAAGCAATT TTA
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Retrieve as FASTA
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