Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
320 (295) |
PWM (Da): |
33485.26 (30844.8) |
Transmb domain: |
i7-25o (i7-25o) |
PI (pH): |
4.08 (4.06) |
Peptide Signal: |
cut: 26 range:26-320 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MDQRTTNLVL VMILSVIVLS GTGQAELSST FYDSSCPNLS TIVSSQVASS VAAEARMGAS LMRLHFHDCW VNGCDGSVLL DDTATFTGEK ASISNNNSLR GFDVIDVIKA DLEAQCPDTV
SCADILALLG GPTWEVLFGR RDSLTASRDA ANTFLPAPSS NVSTLRANFA AVGMGTDEDL VALSGAHTFG KGRCGLVSAR IGGNPPDATI DPDYNATLNS ICSAGAATLV DLDQDTPTDF
DNAYYSNLLI LRGYFTSDQV LQSTGGSTAD LVSSYASDQL TFFTAFANSM IKMGNLSPLE GTDGEIRVNC RVVNSNVATM
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Retrieve as FASTA
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Remarks |
Splicing error of intron 2 confirmed with RNA seq from 1KP |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGACCAGA GGACGACGAA TCTGGTATTG GTGATGATAC TGTCCGTGAT TGTACTGTCT GGTACTGGCC AAGCTGAGCT CAGTTCGACC TTCTACGACT CATCGTGCCC GAATTTGTCA
ACCATTGTGT CGAGTCAAGT GGCTAGCTCT GTTGCTGCTG AGGCTCGAAT GGGTGCATCT CTGATGAGGT TACATTTCCA CGATTGCTGG GTCAATGTGA GTTGCCTTTT TTGATGATAC
TTCTCTGAGA TTAAGCTTAA ACAAAACTAG AAGTTATCTT TTGAACTCGA TAGCTCTGGA GAAATTCCTG GGATATTAAA ATATTAGTGC TCGTCTCCAT CAACCTTCAC CTTGAAAATA
TCCTCACAGA ACTTTGGATC TCCGCAATAC CAACCTCAAC TTCACCAGAT GGGACTTGAA TGCTAACTGT ATATAGACAA AGAACGCGTG CAAGAGATTC TAATCATGTC TTCTGTGTTT
TGTAGGGATG TGATGGATCT GTGCTTCTGG ATGATACGGC GACATTCACG GGAGAGAAAG CCTCGATCTC TAATAATAAT TCACTGAGAG GCTTCGATGT CATAGATGTT ATCAAAGCTG
ATCTTGAAGC TCAGTGCCCT GATACTGTAT CATGTGCTGA CATTTTGGCC TTGGTCGCCT GAGACTCTGT ATTCCAGGTA CACCTGAAGG AAATACACAA CCTTGTTGTA CTGTTAGCAG
TCAGCAGCAC GAAGAGCTGG ATCCTGAAAA AAGACGTACT CTCAATTCAT GAAAATTGAG CGTACATATC TCTCATTTCT GGGGAGATTT ACTGAAAACT GAATTCAGGG CTCCTCATCA
AATGTTAGTA CCTTGCTCTT TGGTCCATGA ACAGGAAGTA TCCTAATTCG CGAGATCAGA GTCTGCATCT GACTGAAGGA GTATTGAGGT ATTTGTGTCC AATTTTTGCA GCTTGGTGGT
CCTACATGGG AAGTCCTGTT TGGAAGAAGA GACAGCTTGA CCGCCTCACG AGACGCTGCC AACACATTCT TACCAGCTCC CTCTAGTAAC GTGTCCACTC TGCGGGCTAA TTTTGCAGCT
GTTGGCATGG GTACCGACGA AGATTTGGTA GCACTGTCAG GTACTTGGAG CTTTACAACA GCGTTATTGG ACTAGCTTGG GATCTCAGAA CAACGTTCAT GCTTTATATT CAGAGTTAGT
TATTACTACA GTACATCAAT GACTAGTGAG ATGACCATCA AAAAGATAAT CAGAATCAAA ATATGCCAAC TCGATTGCTT GCAGGTGCTC ATACCTTTGG GAAAGGCCGT TGCGGTCTTG
TCAGTGCCAG AATCGGAGGA AATCCTCCCG ATGCTACAAT CGATCCTGAT TACAATGCCA CTCTTAACAG CATATGCTCT GCTGGTGCTG CGACATTAGT GGACCTGGAT CAGGACACAC
CGACCGACTT TGACAATGCA TATTACTCGA ATCTGTTGAT ACTGAGAGGA TATTTCACCT CTGATCAAGT TTTGCAGTCT ACAGGCGGGT CCACAGCTGA TCTTGTGTCG TCCTACGCCA
GCGACCAACT AACCTTCTTC ACTGCATTCG CAAATTCCAT GATCAAGATG GGCAACTTAA GCCCTCTCGA AGGAACCGAC GGCGAAATTC GTGTGAACTG CCGAGTGGTA AATTCCAATG
TGGCGACTAT GTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGACCAGA GGACGACGAA TCTGGTATTG GTGATGATAC TGTCCGTGAT TGTACTGTCT GGTACTGGCC AAGCTGAGCT CAGTTCGACC TTCTACGACT CATCGTGCCC GAATTTGTCA
ACCATTGTGT CGAGTCAAGT GGCTAGCTCT GTTGCTGCTG AGGCTCGAAT GGGTGCATCT CTGATGAGGT TACATTTCCA CGATTGCTGG GTCAATGGAT GTGATGGATC TGTGCTTCTG
GATGATACGG CGACATTCAC GGGAGAGAAA GCCTCGATCT CTAATAATAA TTCACTGAGA GGCTTCGATG TCATAGATGT TATCAAAGCT GATCTTGAAG CTCAGTGCCC TGATACTGTA
TCATGTGCTG ACATTTTGGC CTTGCTTGGT GGTCCTACAT GGGAAGTCCT GTTTGGAAGA AGAGACAGCT TGACCGCCTC ACGAGACGCT GCCAACACAT TCTTACCAGC TCCCTCTAGT
AACGTGTCCA CTCTGCGGGC TAATTTTGCA GCTGTTGGCA TGGGTACCGA CGAAGATTTG GTAGCACTGT CAGGTGCTCA TACCTTTGGG AAAGGCCGTT GCGGTCTTGT CAGTGCCAGA
ATCGGAGGAA ATCCTCCCGA TGCTACAATC GATCCTGATT ACAATGCCAC TCTTAACAGC ATATGCTCTG CTGGTGCTGC GACATTAGTG GACCTGGATC AGGACACACC GACCGACTTT
GACAATGCAT ATTACTCGAA TCTGTTGATA CTGAGAGGAT ATTTCACCTC TGATCAAGTT TTGCAGTCTA CAGGCGGGTC CACAGCTGAT CTTGTGTCGT CCTACGCCAG CGACCAACTA
ACCTTCTTCA CTGCATTCGC AAATTCCATG ATCAAGATGG GCAACTTAAG CCCTCTCGAA GGAACCGACG GCGAAATTCG TGTGAACTGC CGAGTGGTAA ATTCCAATGT GGCGACTATG
TAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGACCAGA GGACGACGAA TCTGGTATTG GTGATGATAC TGTCCGTGAT TGTACTGTCT GGTACTGGCC AAGCTGAGCT CAGTTCGACC TTCTACGACT CATCGTGCCC GAATTTGTCA
ACCATTGTGT CGAGTCAAGT GGCTAGCTCT GTTGCTGCTG AGGCTCGAAT GGGTGCATCT CTGATGAGGT TACATTTCCA CGATTGCTGG GTCAATGGAT GTGATGGATC TGTGCTTCTG
GATGATACGG CGACATTCAC GGGAGAGAAA GCCTCGATCT CTAATAATAA TTCACTGAGA GGCTTCGATG TCATAGATGT TATCAAAGCT GATCTTGAAG CTCAGTGCCC TGATACTGTA
TCATGTGCTG ACATTTTGGC CTTGCTTGGT GGTCCTACAT GGGAAGTCCT GTTTGGAAGA AGAGACAGCT TGACCGCCTC ACGAGACGCT GCCAACACAT TCTTACCAGC TCCCTCTAGT
AACGTGTCCA CTCTGCGGGC TAATTTTGCA GCTGTTGGCA TGGGTACCGA CGAAGATTTG GTAGCACTGT CAGGTGCTCA TACCTTTGGG AAAGGCCGTT GCGGTCTTGT CAGTGCCAGA
ATCGGAGGAA ATCCTCCCGA TGCTACAATC GATCCTGATT ACAATGCCAC TCTTAACAGC ATATGCTCTG CTGGTGCTGC GACATTAGTG GACCTGGATC AGGACACACC GACCGACTTT
GACAATGCAT ATTACTCGAA TCTGTTGATA CTGAGAGGAT ATTTCACCTC TGATCAAGTT TTGCAGTCTA CAGGCGGGTC CACAGCTGAT CTTGTGTCGT CCTACGCCAG CGACCAACTA
ACCTTCTTCA CTGCATTCGC AAATTCCATG ATCAAGATGG GCAACTTAAG CCCTCTCGAA GGAACCGACG GCGAAATTCG TGTGAACTGC CGAGTGGTAA ATTCCAATGT GGCGACTATG
TAA
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Retrieve as FASTA
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