Entry information : HaPrx05 (HanXRQChr17g0543531)
Entry ID 1475
Creation 2005-07-12 (Christophe Dunand)
Last sequence changes 2016-04-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaPrx05 (HanXRQChr17g0543531)
Name (synonym) HaPrx05 (HanXRQChr17g0543531)
Class Class III peroxidase    [Orthogroup: Prx007]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPrx05
start..stop
S start..stop
HaPrx123 651 0 1..324 1..324
LsaPrx31 591 0 1..324 1..325
LvPrx31 588 0 1..322 1..323
HaPrx108 569 0 1..324 1..324
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1475' 'complement(join(34711757..34712172,34714006..34714168,34714272..34714469,34714782..34714979))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 34714782..34714979 196 N° 2 34714272..34714469 196 N° 3 34714006..34714168 161 N° 4 34711757..34712172 414
complement(join(34711757..34712172,34714006..34714168,34714272..34714469,3471478 2..34714979))


exon

Literature and cross-references HaPrx05 (HanXRQChr17g0543531)
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project Unpublished (2002). Genoplante
DNA ref. HanXRQ genome:   HanXRQChr17 (34714979..34711757)
EST ref. GenBank:   DY922862.1 [5' end]
Cluster/Prediction ref. HanXRQ:   HanXRQChr17g0543531
Protein sequence: HaPrx05 (HanXRQChr17g0543531)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (305)
PWM (Da):   %s   35465.96 (33144.7)  
PI (pH):   %s   6.65 (6.03) Peptide Signal:   %s   cut: 20 range:20-324
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKGFCWILVFLVVLRWVQCDLQMGYYGSSCPKAEKIVQDYVNEHI
PNAPSLAAALIRMHFHDCFVK
GCDASILLNVTSSSGNQTEKVAIPNQTVRGFDFIDRLKSLVEAECPGIVSCADIIALAARDSIAITGGPSWKVPTGRRDGLLSNASEALNQIPAPFDNITILIQKFANKSLDLKDLVLLSGAHTIGIAHCPSVSNRLYNFTGVGDRDPSLDSEYADNLRATKCRTQNDTTTILEMDPGSRKTFDLSYYTLLLKRRGLFESDSALTTNSNTLAYINQLLQGSLQNFFSEFALSMEKMGQIE
VKTGTSGEIRRNCAVVNS

Retrieve as FASTA  
Remarks Complete sequence from genomic and 1 EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAAGGTTTTTGCTGGATTTTGGTTTTTCTAGTGGTTTTGAGATGGGTACAATGTGATTTGCAGATGGGATATTATGGGAGTTCGTGCCCGAAAGCCGAAAAGATTGTGCAAGACTAT
GTGAATGAGCATATCCCGAATGCCCCATCGCTTGCGGCTGCTCTTATCAGAATGCATTTTCATGATTGTTTCGTCAAG
GTTCGTTTCATTTTCTAGCTACCTTTTTTCGTGTCATATATC
ATGACAGTTTTTAAATATCATTGTTCATATATTTAAACAAAACTCGACTGCTGTACGCGAGTAGTGTGCTTGTTAAACGATGAAAACAAGCACACGCTTATTTTGGAGTTTAGATATCCC
AACTTCGGTTTAAATCAAGAATGCTATTATTTAACGCGTCCAAAATGATTATTCTAACCTCAATACGAGATTACTATTTGATTGTTTTACTACATTCCACACGTATGATTATTATTTTTA
CCCATAAGGCAACATGGTTGTTTTGAATAGGGGGTTGTGATGCATCAATCCTCTTGAATGTTACTTCAAGCTCAGGGAATCAGACAGAGAAAGTGGCAATACCAAACCAAACAGTAAGAG
GGTTTGATTTCATTGATAGATTGAAGAGTTTAGTTGAAGCAGAATGCCCTGGCATTGTTTCTTGTGCTGATATTATTGCTCTTGCTGCTAGAGACTCCATTGCTATCACT
GTAAGAATTC
AAATTTCATTACAAAAAGAAAACGAACCGAATGTAATTCCCAAATAGATGTTTTTGGTTCTGATTTCTTTTGTTGTTTTCGGTTTTATTAAAGGGGGAGGCCCTTCTTGGAAAGTCCCGA
CGGGGCGAAGAGATGGGTTGTTATCCAATGCATCCGAGGCGTTAAACCAAATCCCGGCTCCATTCGACAATATCACTATCCTCATACAAAAGTTTGCCAATAAAAGTCTTGATTTGAAGG
ATCTTGTTTTGCTTTCCG
GTACGTTATTTTTTTTTTTTACTTTAGTGCTCTTTTCGTCCATGTGATTTGATGAGTTTTGTCATTTCAATCAAAATTCTTAAATTTTGTCATTTATATGTT
GTGCTTTCCCTTGTGCACTGCAATGGTCTAACACAATCCAATTTAATTGCTAAATCCCCATGTGAGGATGTCTTTTTTAACCTTCAACTCATTAAAAAATGAGTTGTTTATACTTCATAG
AAAAAAAAAAATAGACCATAGTAATTTTAAAACCAACAAAAAAAAACCATAGAACATGTATGCGTTTGAATCTAGATCAATATCGATCCTGTCTAAGGATCTCCAAGAACCAGTCTTCCT
GTTGACAAATTTAGTAATAAACATGATTTAGAAAATGATTTGATGGTATATCTTTTTTTTTTTTTTTTTTCAAAAAAGCATGAACTTTCCTAATAGCCTATGAAATACATTACATAAATT
TTAATTTGTGTTTTCTTGTAATTTTCTTTATATATTGTTGTGTTGTAAAAATCGCGACTAGTCGGCTATTAATCGCTAGCCGGCCATTAAATGAGTAATTTTTCATTAATCAGCCCATTA
ATCGCTAGTTGGCCTAGTCGGCTAGCCAAAAATCGGTGATTCCGGCCAGATTCCGGCAAAAAAACCTTTATATTCCAGCCAAAACCTCTAAATTCCGGCCAGTTTCCAACTAAACCATGT
GAATTCTAACAATTAATCTTGTATACTTAAAAAATGAGATGAGTAAGACTTAAAACCTAGCTACTTAAAATATTTACCTATAAAAATATGTATATGTATACATAAAACTGAAAATTACAT
ATAAAAACCCGATCCAGTTACTCTCGAGTAGTCGCTAGTCCCCACCTCAACTACCGACTAGCGATAGCGAGTTCTCTAACCTTATTTTTTTTTGTTAGATTTAAAACTAAAAGTTATTGG
AATTCTTATTAAAAGAATATTTTAGCTATTTTATATTGGCTTGATCAAACCCATTTTTTTATTGGTTGAAGGTTAAAACACTAAAGAGAAAAGTACACATATTACATATTGTCTTTGCAA
TCAGTCAAAATTTTGGATTTAGCAGTTGTTCCATATTATTTGCACTTTATAATGTATTTACTTCTTAACTTTTATCAAAATTACACAGAAGGTTCTAATGGTTTGCGTAGATAGATGGTC
CATATTATTTGCACTTTATAACGTATTTACTTCTTAACTTTTATCAAAATTACACAGAAGGTTCTAATGGTTTGCAGTATATGACGCATTTGTTCCCCAACTTTTAGTGATTAAATGCAT
TACAAAGTGCAACCCACGGGACCATCCTTGTACTTCTGTCAAAAGTTGAGGACTAAATGTATTACAAAGTACAAACCAAAAGGACCATACGTGTATTTCTGGAAAGCGAAGGACTAAATC
CACAATTTTATTAACCATAGGGACCATCCGTATACTTTACTCAAAACTAAATTACCCTCATGGCCACATATGGGGTGCACGTTGGGGGTAAAAACAGAAAAAATTGATGGTGATCATAGG
CAATTGGAGTGAAAGTAACGTCAAAATATGACAAGATTTAAGTAGTTGAATCAAAATGCCAAAACGGATCAAACCATGTAGACGAAAACAACACTTAACCCTTTTTACGTAATTGGATGA
AATTTAATGCATTTTGTTTTAGTATGTCACACGGAACAATGTGACTTTAATCAAACCCGAGCCATAACAGAAGGTCACAATGTGACTACAAAGCCCTTCAACTTTTTTTTTTTTTGCTAA
ATTTAAGATGTTACTCATTCAAGGTTTCACATATTTGTGACGTTATATTAGGTGTGCTCATACTATTGGGATCGCACATTGTCCATCGGTATCAAACCGTCTATACAATTTCACGGGTGT
GGGAGATCGAGACCCCTCCCTTGATAGCGAATATGCAGACAATCTCAGAGCAACAAAATGCAGGACACAAAACGACACTACAACAATACTTGAGATGGATCCTGGGAGCCGTAAGACTTT
TGATCTTAGCTACTACACGTTATTGCTAAAACGTAGGGGCTTGTTCGAGTCTGATTCGGCTTTGACTACAAACTCCAACACGTTGGCATACATAAACCAACTTCTTCAAGGATCGCTCCA
GAATTTCTTCAGTGAGTTTGCATTGTCGATGGAGAAAATGGGTCAAATTGAGGTGAAAACCGGAACCTCTGGTGAAATTCGAAGGAATTGTGCTGTCGTAAATAGTTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAAGGTTTTTGCTGGATTTTGGTTTTTCTAGTGGTTTTGAGATGGGTACAATGTGATTTGCAGATGGGATATTATGGGAGTTCGTGCCCGAAAGCCGAAAAGATTGTGCAAGACTAT
GTGAATGAGCATATCCCGAATGCCCCATCGCTTGCGGCTGCTCTTATCAGAATGCATTTTCATGATTGTTTCGTCAAG
GGTTGTGATGCATCAATCCTCTTGAATGTTACTTCAAGCTCA
GGGAATCAGACAGAGAAAGTGGCAATACCAAACCAAACAGTAAGAGGGTTTGATTTCATTGATAGATTGAAGAGTTTAGTTGAAGCAGAATGCCCTGGCATTGTTTCTTGTGCTGATATT
ATTGCTCTTGCTGCTAGAGACTCCATTGCTATCACT
GGAGGCCCTTCTTGGAAAGTCCCGACGGGGCGAAGAGATGGGTTGTTATCCAATGCATCCGAGGCGTTAAACCAAATCCCGGCT
CCATTCGACAATATCACTATCCTCATACAAAAGTTTGCCAATAAAAGTCTTGATTTGAAGGATCTTGTTTTGCTTTCCG
GTGCTCATACTATTGGGATCGCACATTGTCCATCGGTATCA
AACCGTCTATACAATTTCACGGGTGTGGGAGATCGAGACCCCTCCCTTGATAGCGAATATGCAGACAATCTCAGAGCAACAAAATGCAGGACACAAAACGACACTACAACAATACTTGAG
ATGGATCCTGGGAGCCGTAAGACTTTTGATCTTAGCTACTACACGTTATTGCTAAAACGTAGGGGCTTGTTCGAGTCTGATTCGGCTTTGACTACAAACTCCAACACGTTGGCATACATA
AACCAACTTCTTCAAGGATCGCTCCAGAATTTCTTCAGTGAGTTTGCATTGTCGATGGAGAAAATGGGTCAAATTGAGGTGAAAACCGGAACCTCTGGTGAAATTCGAAGGAATTGTGCT
GTCGTAAATAGTTAA

Retrieve as FASTA