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Entry information : AhalPrx43 (Araha.35528s0001)
Entry ID 14824
Creation 2018-01-09 (Christophe Dunand)
Last sequence changes 2018-01-09 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2018-01-10 (Christophe Dunand)
Peroxidase information: AhalPrx43 (Araha.35528s0001)
Name (synonym) AhalPrx43 (Araha.35528s0001)
Class Class III peroxidase     [Orthogroup: Prx026]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis halleri    [TaxId: 81970 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AhalPrx43
start..stop		 S start..stop
CrubPrx99 406 1.28e-142 1..279 122..404
NoffPrx48-1B 390 2.59e-136 1..280 124..412
BrPrx48-1Aa_other 375 1.22e-130 1..280 118..398
NoffPrx48-1A 375 2.59e-130 1..280 124..413
Literature and cross-references AhalPrx43 (Araha.35528s0001)
Protein sequence: AhalPrx43 (Araha.35528s0001)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   283 (335)
PWM (Da):   %s   30823.92 (34867.1)  
PI (pH):   %s   9.01 (4.05) Peptide Signal:   %s   cut: 21 range:21-355
Sequence
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Send to Peroxiscan
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GCDASVLLDT DKAFASEKEA PPNLSLKGFD VLETIKSKLE NVCPGVVSCA DILALAARES VQLTGGPRFL VKTGRRDRTT ALKDAAGREL PAPQANLSVV LRSFASKGFT ARETVALLGA  HSIGITHCEF FEDRLYNFSG TGKPDPELNP ILLQELKTKC PFSASISPPS ATTGSTPSLD DKTYTAVPLK SMVIDLSFNN EGGQADFGIR YYRGLMQKKG VMFADQQLMA KDETARWVRA 
YAHDSQRFRK DFAKAMTKLT NLQILTAPLG EVRKQCSKVL NTF* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. 5'end is missing due to scaffold border.
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGATGTGATG CATCAGTCCT TCTAGACACA GATAAAGCGT TCGCTTCGGA GAAAGAAGCA CCTCCAAACC TGTCTCTTAA AGGGTTTGAT GTGCTCGAGA CTATTAAATC TAAGCTAGAG  AATGTCTGTC CCGGAGTAGT ATCTTGCGCG GACATTCTTG CTTTGGCCGC CAGAGAATCA GTGCAATTGG TATTTGCTTC TCTCTATATC TCTCCCCTGA TTTGTCCATC TGCATATTCT  GTACCACTTA CGAGAATATC TATGTTTCTT GATATCTCAG ACCGGTGGTC CAAGATTCCT TGTGAAAACC GGGCGAAGAG ATCGCACAAC TGCTCTCAAG GATGCTGCAG GACGGGAGCT  TCCTGCACCG CAAGCTAATC TCTCGGTCGT TCTCAGAAGC TTTGCTTCAA AAGGTTTTAC AGCCAGAGAA ACTGTTGCTC TACTAGGTAT AAAATACTGC CCACTTATTC AAATTGGTTC  TGAACTTTGT TTAGCGTGAT TTTTATCCCC TCATTGTTCC TGATGCAGGA GCACACAGCA TAGGTATCAC GCATTGCGAG TTTTTTGAGG ACCGGCTTTA CAACTTCTCT GGAACCGGGA  AGCCTGATCC TGAACTCAAT CCAATTCTCC TTCAAGAACT GAAAACCAAA TGCCCCTTCT CTGCCTCGAT CTCACCTCCA TCTGCTACCA CTGGCTCAAC TCCGTCCTTA GATGATAAGA  CATACACTGC TGTGCCTTTG AAATCCATGG TGATCGACTT GAGCTTCAAC AACGAAGGAG GTCAGGCAGA TTTTGGCATA CGCTACTACA GGGGCCTGAT GCAGAAAAAA GGGGTAATGT  TTGCAGACCA GCAACTTATG GCTAAAGATG AGACTGCGAG ATGGGTCCGA GCATACGCTC ATGATTCACA GAGGTTCCGC AAAGATTTTG CCAAGGCTAT GACCAAGCTA ACAAACCTTC  AAATCTTGAC TGCTCCTCTA GGTGAGGTGA GGAAGCAGTG TTCAAAAGTA CTGAATACAT TCTGAATTTG CGCTTATCAA TTAGAGTTAA TCTCTACAGA GAGACCAAAT ACTTAGACTT 
CAGGTGTGTG TACTCTCAAG TCCTAAGTCT TTTGCTCTGC ACCTTTCCAA AACCTTTTTC GGTTCTTATA TGTGAATAGT TCTGAGAATG TTTTTTAATG CTTT 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGATGTGATG CATCAGTCCT TCTAGACACA GATAAAGCGT TCGCTTCGGA GAAAGAAGCA CCTCCAAACC TGTCTCTTAA AGGGTTTGAT GTGCTCGAGA CTATTAAATC TAAGCTAGAG  AATGTCTGTC CCGGAGTAGT ATCTTGCGCG GACATTCTTG CTTTGGCCGC CAGAGAATCA GTGCAATTGA CCGGTGGTCC AAGATTCCTT GTGAAAACCG GGCGAAGAGA TCGCACAACT  GCTCTCAAGG ATGCTGCAGG ACGGGAGCTT CCTGCACCGC AAGCTAATCT CTCGGTCGTT CTCAGAAGCT TTGCTTCAAA AGGTTTTACA GCCAGAGAAA CTGTTGCTCT ACTAGGAGCA  CACAGCATAG GTATCACGCA TTGCGAGTTT TTTGAGGACC GGCTTTACAA CTTCTCTGGA ACCGGGAAGC CTGATCCTGA ACTCAATCCA ATTCTCCTTC AAGAACTGAA AACCAAATGC  CCCTTCTCTG CCTCGATCTC ACCTCCATCT GCTACCACTG GCTCAACTCC GTCCTTAGAT GATAAGACAT ACACTGCTGT GCCTTTGAAA TCCATGGTGA TCGACTTGAG CTTCAACAAC  GAAGGAGGTC AGGCAGATTT TGGCATACGC TACTACAGGG GCCTGATGCA GAAAAAAGGG GTAATGTTTG CAGACCAGCA ACTTATGGCT AAAGATGAGA CTGCGAGATG GGTCCGAGCA  TACGCTCATG ATTCACAGAG GTTCCGCAAA GATTTTGCCA AGGCTATGAC CAAGCTAACA AACCTTCAAA TCTTGACTGC TCCTCTAGGT GAGGTGAGGA AGCAGTGTTC AAAAGTACTG 
AATACATTCT GA 

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGATGTGATG CATCAGTCCT TCTAGACACA GATAAAGCGT TCGCTTCGGA GAAAGAAGCA CCTCCAAACC TGTCTCTTAA AGGGTTTGAT GTGCTCGAGA CTATTAAATC TAAGCTAGAG  AATGTCTGTC CCGGAGTAGT ATCTTGCGCG GACATTCTTG CTTTGGCCGC CAGAGAATCA GTGCAATTGA CCGGTGGTCC AAGATTCCTT GTGAAAACCG GGCGAAGAGA TCGCACAACT  GCTCTCAAGG ATGCTGCAGG ACGGGAGCTT CCTGCACCGC AAGCTAATCT CTCGGTCGTT CTCAGAAGCT TTGCTTCAAA AGGTTTTACA GCCAGAGAAA CTGTTGCTCT ACTAGGAGCA  CACAGCATAG GTATCACGCA TTGCGAGTTT TTTGAGGACC GGCTTTACAA CTTCTCTGGA ACCGGGAAGC CTGATCCTGA ACTCAATCCA ATTCTCCTTC AAGAACTGAA AACCAAATGC  CCCTTCTCTG CCTCGATCTC ACCTCCATCT GCTACCACTG GCTCAACTCC GTCCTTAGAT GATAAGACAT ACACTGCTGT GCCTTTGAAA TCCATGGTGA TCGACTTGAG CTTCAACAAC  GAAGGAGGTC AGGCAGATTT TGGCATACGC TACTACAGGG GCCTGATGCA GAAAAAAGGG GTAATGTTTG CAGACCAGCA ACTTATGGCT AAAGATGAGA CTGCGAGATG GGTCCGAGCA  TACGCTCATG ATTCACAGAG GTTCCGCAAA GATTTTGCCA AGGCTATGAC CAAGCTAACA AACCTTCAAA TCTTGACTGC TCCTCTAGGT GAGGTGAGGA AGCAGTGTTC AAAAGTACTG  AATACATTCT GAATTTGCGC TTATCAATTA GAGTTAATCT CTACAGAGAG ACCAAATACT TAGACTTCAG GTGTGTGTAC TCTCAAGTCC TAAGTCTTTT GCTCTGCACC TTTCCAAAAC 
CTTTTTCGGT TCTTATATGT GAATAGTTCT GAGAATGTTT TTTAATGCTT T 

Retrieve as FASTA