View Redoxidase 1485

Entry information : HaPrx15 (HanXRQChr02g0042661)

Entry ID	1485
Creation	2007-09-06 (Christophe Dunand)
Last sequence changes	2016-04-27 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaPrx15 (HanXRQChr02g0042661)

Name (synonym)

HaPrx15 (HanXRQChr02g0042661)

Class

Class III peroxidase [Orthogroup: Prx005]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

Protoplasts

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaPrx15 start..stop	S start..stop
LsaPrx32	668	0	1..359	1..358
LperPrx32	661	0	7..359	17..369
LsePrx32	632	0	1..346	1..345
LsPrx32	535	0	1..290	1..289

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1485' 'join(80531983..80532231,80532328..80532522,80534103..80534738)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	80531983..80532231	247	N° 2	80532328..80532522	193	N° 3	80534103..80534738	634
join(80531983..80532231,80532328..80532522,80534103..80534738)

Literature and cross-references HaPrx15 (HanXRQChr02g0042661)

Literature	Tamborindeguy,C., Ben,C., Liboz,T. and Gentzbittel,L. Sequence evaluation of four specific cDNA libraries for developmental genomics of sunflower Mol. Genet. Genomics 271 (3), 367-375 (2004)
DNA ref.	HanXRQ genome: HanXRQChr02 (80531983..80534738)
EST ref.	GenBank: DY916029 [5' end]
Cluster/Prediction ref.	HanXRQ: HanXRQChr02g0042661 UniGene: Han.1936

Protein sequence: HaPrx15 (HanXRQChr02g0042661)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	359 (331)
PWM (Da):	39287.63 (36320.1)	Transmb domain:	i7-26o
PI (pH):	6.23 (6.34)	Peptide Signal:	cut: 29 range:29-359

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAASCSTSLFLVFSSLLIFSSLLYVSEADYSAPITKGLSWDYHHK
TCHKVEKIVRKHLKKVFDKDIGQAAGLLRLHFHDCFVQGCDGSVLLDGSHGGPSEQTAPPNQSLRKEAFDIIEDLRNLVHRECGRIVSCADIVALAARDAVHLSGGPDYDVPLGRKDGLSFATENATLANLPAPTSNATTILSALAVKNLTPTDVVAL
SGGHTIGVSHCSSFASRLYPTQDPTMEKTFAHGLKEVCPTNTTDATTAMDIYSPIKFDNKYFVDLMNRQGLFTSDQDLYTHKVTKPIVESFAHDEKLFFEAFVKAMIKMGQMEVLTGGKG
EIRAHCSIRNPDNKAYFSYLVEEEDQSDLETRAELR*

Retrieve as FASTA

Remarks

Complete sequence from genomic and4 ESTs. Strain="ANN1312" and "Emil".

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCGGCTTCTTGTTCAACCTCTTTGTTTCTAGTTTTCTCGTCTCTCTTGATCTTCTCATCTCTTCTTTACGTATCCGAAGCCGATTACTCCGCACCCATTACAAAAGGATTATCATGG
GATTACCACCACAAAACATGTCACAAAGTTGAAAAAATTGTTCGAAAACATCTCAAGAAAGTATTCGACAAGGATATCGGTCAAGCAGCGGGCTTGCTTCGACTTCACTTTCACGATTGT
TTTGTCCAGAGGTAGCATTTAACTAAGCACATCATGGTTAATTATTATGATTAATTAAAGTAGTACGTATGTATGTATGTAATGATCATATATAATTATGCATGTAGGGATGTGATGGTT
CGGTATTGCTTGATGGGTCTCATGGTGGTCCGAGTGAACAAACCGCACCACCCAACCAAAGTCTACGAAAAGAGGCGTTCGACATCATCGAAGATCTACGGAATTTGGTCCATAGAGAAT
GCGGGAGAATCGTGTCTTGTGCTGATATTGTTGCTCTTGCGGCTCGTGATGCTGTTCATCTGTGGTACATATATAGTTACGATATGAATTCAAAATATATCCCTCACAATATTTTTACTT
TTAACATAAAAATAGTCATGTTTACCATTGAAGTCCACAAGAATGAGGGGCTATTTGTTTATATCTTAATGGTTTAGAATTTTTATTGGTTCATCACTTAATTGTTTAGTCTATTTGTTT
CGCGAGCAGATATCTGAATGGTTAAACATTATAATAAGTTTGAATAGTTAAGACCTCTGATCTGAATTTGTCAAACATTTGCCTATGAACGGTTAAGCATTATACTGGCTTTTACTGATT
CTGTACTTAATGGTTTAGATCTCTTACTGATCCAACACTTAACTAGAAGTTGCCTAAACAGCCCCTAGAAGTTGCCTAAACAGCCCCTGACTTGTATTCTTCACGCTGCAAACTTTTAAT
TGGCACAACAAATTCATATTGCTACACCAGATCCTCCACCAAGCTTATTTTTTAAACGATTTTTTGTAAATGTTTTTTCTAGTTTAATTTTTTTTTTATAAATTATTACTTCGTAACACT
GCTTTCTTTTTCTATTAACGTTTAACTTTTTCTAAAAAAAATATTTTATTTAATTAGTTGTAAATTTTATGTATTATGTTATAAAAATCTAATAAAAAACTATGGTAAAGCAATAAAACA
GCTAAGATATAAAGGTAAATACATAAAAATAGGGCTGCAAACGAACCGAACGAACACGAACAAGTCCTTGTTCGTGTTCGTTTGTTAAAAATATATGTGTTCACGAACTGTTTATGAACG
CTTACCAAACGAGATTTTATGTTCGTGTTTGTTTGTTAAGGAAATGAACTTTTTCGTGTTCGTTTGTGTTTGTTTGTTCATGAACACAAACGAGCACAAACTAATGTTCATGAACACAAA
CGAGCACAAACTAATGTTCATGAACACAAACGAGCACAAACTAATGTTCATGAACACAAATGGTAACAAACGAACACAAAAAAACGTTTATGAACAAAATACATAATACATTGACACTTA
TTAAATATTTTATTTTTCGGAATTTTGAAGTATTTAAATAAAATATAAAAGCTAAAAACACTAATGAACTATCAAACACAAACGAACACGTTACCGAACGTTCACGAACATAAATGAACG
AATGCACCCTCTGTTCATGTTTGTTCATTTAACTAAACGAACGAAATTTCTTGTTTGTGTTCGTTTGTTTAATAAACGAACGAACACAAACGAACTTCCCGCCGAACAGTTCACGAATTG
TTCGCCAAACGTCTGGTTCGTTTGCAACCCTACATAAAAAATAACAAATACAACTATAAAGTGTATTTTTTTTAACTTGATTTGTTAGATAAAAATAGAAGTAACACTTTTTTCGAATTT
AAAAAATGATAAATGATAAATTGGTAAATAAAAATATCAATGGTCATTTCAACAAGTTTTCCGGTCAAGATGAATAGTTTCTTTTGATTTTCCAACATTTTGGACCCACGTATATTTGGA
AAAGTATTTAACAAGTACTATATGTTAATAATTCAATTTACTAAATAAACTTGTTTTATCTTCTTTATATTTGTGTTACTAAAGTCAGGTGGACCGGACTATGATGTTCCATTGGGTAGA
AAAGATGGTCTCTCATTCGCCACAGAAAACGCCACACTAGCCAACCTTCCAGCACCCACAAGTAATGCCACCACTATTCTTTCTGCGCTTGCCGTAAAAAACCTCACCCCAACAGATGTG
GTGGCCCTCTCTGGGGGCCACACTATCGGGGTGAGCCACTGCTCCTCCTTCGCCTCGCGTCTCTACCCCACCCAAGACCCCACCATGGAAAAAACCTTTGCCCATGGGCTCAAAGAGGTT
TGTCCCACCAACACCACCGATGCCACCACTGCCATGGACATTTACTCTCCAATCAAGTTCGACAACAAGTATTTCGTCGATTTGATGAACCGACAAGGGCTTTTTACCTCGGATCAAGAT
TTGTATACTCATAAAGTGACTAAACCAATTGTGGAAAGTTTTGCACATGATGAGAAGTTGTTCTTTGAGGCATTTGTGAAAGCCATGATCAAAATGGGACAAATGGAAGTGTTGACCGGT
GGAAAAGGAGAAATTCGTGCACATTGTTCTATTAGGAACCCTGATAACAAAGCGTATTTCTCTTATTTGGTTGAAGAAGAGGACCAGTCCGATCTCGAGACAAGGGCCGAATTGCGTTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA