View Redoxidase 1486

Entry information : HaPrx16 (HanXRQChr14g0448801)

Entry ID	1486
Creation	2007-09-06 (Christophe Dunand)
Last sequence changes	2016-04-27 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaPrx16 (HanXRQChr14g0448801)

Name (synonym)

HaPrx16 (HanXRQChr14g0448801)

Class

Class III peroxidase [Orthogroup: Prx002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

Protoplasts

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaPrx16 start..stop	S start..stop
HaPrx19	543	0	12..331	10..327
LsPrx28	520	0	6..289	3..285
LperPrx28	516	0	6..288	1..282
LsaPrx28	515	0	6..289	3..285

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1486' 'complement(join(135642294..135643289))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	135642294..135643289	994
complement(join(135642294..135643289))

Literature and cross-references HaPrx16 (HanXRQChr14g0448801)

Literature	Kozik,A., et al., Lettuce and Sunflower ESTs from the Compositae Genome Project
DNA ref.	HanXRQ genome: HanXRQChr14 (135643289..135642294)
Cluster/Prediction ref.	HanXRQ: HanXRQChr14g0448801 UniGene: Han.2345

Protein sequence: HaPrx16 (HanXRQChr14g0448801)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	331 (304)
PWM (Da):	36901.8 (33803.1)
PI (pH):	9.5 (9.50)	Peptide Signal:	cut: 28 range:28-331

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MAMQQVLIKP LILTLLCISL ILQPSHSQQL STSFYHKSCP RFEQIIQDTT TNKQIASPTT AGAALRLFFH DCLVEGCDAS VLISSTPFNK AERDADINLS LPGDGFDVVV RAKTALELAC PGVVSCADIL AVATRNLVTM MGGPFYNVKL GRRDGLVSRA SRAQNILPKP TMSMNRIIRL FKSIGFSVQE MVALTGAHTI GFSHCSEISS DIYNYNNSSR FDPSYNPRYA MGLRNACADY
RKNPSLSVFN DIMTPRDFDN SYYKNLPKGL GVLRSDRALV MDRRTRPFVE LYARDQKAFF EAFGRAIEKL SLYGVKTGRN GEIRRRCDSF N*

Retrieve as FASTA

Remarks

Complete sequence from genomic and 3 EST +1 EST (BQ968573).

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGCGATGC AGCAGGTGCT AATAAAACCA CTCATTCTAA CCCTCTTGTG CATCTCACTC ATCTTACAAC CTTCACATTC TCAGCAGCTT TCCACATCAT TCTACCACAA ATCATGCCCC AGATTCGAAC AAATAATCCA AGACACCACC ACCAACAAAC AAATCGCCTC CCCCACCACC GCCGGCGCCG CCCTCCGCCT CTTCTTCCAC GACTGTCTCG TCGAAGGCTG CGACGCTTCC GTCCTCATCT CCTCCACCCC CTTCAACAAA GCCGAGCGTG ATGCCGACAT CAATCTCTCT CTCCCAGGTG ACGGTTTCGA CGTCGTCGTA CGCGCCAAAA CCGCCCTCGA ACTCGCTTGT CCCGGTGTCG TCTCATGCGC TGACATCCTC GCTGTCGCCA CGCGCAACCT CGTCACCATG ATGGGTGGCC CCTTCTACAA CGTTAAACTT GGTCGGAGAG ATGGATTGGT TTCACGCGCC TCACGCGCGC AAAACATTTT GCCCAAACCC ACAATGTCTA TGAACCGGAT CATAAGATTA TTTAAATCCA TAGGTTTTTC CGTACAGGAA ATGGTGGCCT TAACCGGGGC TCATACTATT GGGTTCTCAC ATTGTAGTGA AATAAGTTCA GATATTTATA ATTACAATAA CTCCTCAAGG TTTGATCCGT CTTATAATCC TAGGTATGCT ATGGGATTAA GGAATGCGTG TGCGGATTAC CGGAAGAATC CATCGTTGTC GGTTTTTAAT GATATAATGA CCCCGAGGGA CTTTGATAAC TCGTATTATA AGAATTTGCC CAAAGGGTTG GGTGTTTTGA GGTCGGATAG GGCGCTTGTT ATGGATCGAC GGACAAGGCC GTTTGTGGAG TTGTATGCGC GAGATCAGAA GGCGTTCTTT GAGGCGTTTG GTCGAGCGAT TGAGAAGTTG AGTTTGTATG GTGTGAAGAC TGGGAGGAAT
GGAGAGATTC GGCGTAGATG TGACTCGTTT AATTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA