Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
326 (165) |
| PWM (Da): |
35271.17 (17411.5) |
Transmb domain: |
i183-205o220-237i |
| PI (pH): |
6.14 (5.61) |
Peptide Signal: |
cut: 34 range:34-198 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAWTKAKMSL ALSLVTVILS VSLADLKVGF YSNTCPQAES IVRRVVSGAA LSDPNLPAIL LRLHFHDCFV EGCDGSILVD NGAISEKNAF GHEGVRGFEI VEAVKAELEA ACPGVVSCSD
IVALAARDAI SLANGPAYEV PTGRRDGLVS NMSLAKDMPE ISDTIQILKA KFMQKGLNAK ELVLLSAAHT IGTTACFFMT KRLYNFLPGG QPDPTINPVF LPELTTQCPQ NGDINVRLPM
DRISERVFDK QILQNIKDGF AVLQTDAGLY EDVTTRRVVD SYLGMLNPFF GPTFESDFVK AIVKMGKIGV KTDSKGEIRR VCSAFN*
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Retrieve as FASTA
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| Remarks |
Incorrect prediction from Phytozome (Cagra.3467s0037 contains the 5'end and Cagra.3467s0038 contains the 3'end) |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCATGGA CAAAGGCTAA GATGAGTCTA GCTTTGTCTC TGGTTACGGT AATCCTCAGC GTCTCTCTTG CTGATCTAAA AGTCGGGTTT TACTCCAATA CATGTCCTCA AGCCGAGTCA
ATCGTTAGGA GAGTTGTCTC AGGAGCTGCT CTTTCTGACC CTAACCTCCC AGCCATACTT CTACGTCTCC ATTTCCACGA CTGCTTTGTT GAGGTACAAT GCACTTTCCT CCTCTTTGTG
CTTTCTACTA TTATTGCAAT GCTTATAGAT TTAAGCACGT ACAGGGATGT GATGGCTCGA TCCTCGTGGA TAACGGAGCA ATCTCTGAAA AGAATGCCTT TGGGCACGAA GGCGTTAGAG
GATTTGAGAT AGTAGAAGCC GTCAAAGCCG AGCTTGAAGC TGCATGCCCC GGTGTTGTCT CCTGCTCAGA CATTGTTGCC TTGGCGGCAC GTGATGCCAT ATCTTTGGTA AAAAATCAAT
TAGAGAAAGA AAAAATTGAA TCTATTGATC TTTTGTCTTT CTTCTTCCCT GTGGTGATCA ATTCATGATA CAGGCAAATG GACCAGCGTA TGAGGTACCA ACTGGGCGGA GAGATGGTCT
GGTTTCGAAT ATGTCGCTGG CTAAGGACAT GCCTGAGATC AGCGACACGA TTCAGATACT AAAGGCTAAG TTCATGCAGA AGGGGCTCAA CGCCAAAGAG CTCGTGCTTC TCAGTGGTAT
GTATCGCTTC TTCTTGGTCT TTCTCTCTCA TTCATGTTTG TTTGGTGGTT TCAAATCTCT CGAGGTTTTT GGTTCGAAGT TCAAGTTATA TGATTTTTCG TTTCCCGAAT CCGTGATGTG
TTTCCCATGT TTCGTCCGTT TCCTCTTTCC CTTCGTGTGT TAGTGTCACG TGCTTCCGTC CTTTACGAAA TTCTGGTTGA CCAATAAAAT AAAAATAAAA ACAAAAAAGC CTAAGCCAAT
TTTCTTCCTC AGAAAAAAAA GTTCCTCATA AATTTGGATA AGAAATTCGT GAAAATATAT TAATAACAAA AAAATATGTC CAGTGTTTTT TATGTTTTTG CTAAGATTAT TGCAAAATGA
AAAGTCATTT GTTGAAAAAA ATATCTAGGC CTTTCGTCAA CTTACGTTAG GCATTTTTGC ATGAGTTTGT ATTTTATTAC AATTTCAACT ACAAAATTGA GTGTGTTCTA TTAGTAAGAT
GTGTGTTGAT TTTCTGTCAT CTAATCCACT AAATCGGGCA TGGCTCAGAA ATGTCATCAT TCACACGAAA ATATGGGTGT TATAGAAGCG GCAGTTAATC GGACAAAACA CATAAATATC
TATCGGGCCA TTCTTGTTTT TGTCATTCGA TAGAGTAGAT ATTAGGGTTA CGTCATCAAC GTGCACGTGT GACCAAGAAC AGAAGAGCAC GAGTCTAATA CAGTAGTAAC TAGTGATCAT
GCCTTTGAAA CTGGACTCAG TTTGTGTCAT TTTAATATCT TAACATGAAA GAAAAACAGA AAAAGAAAAA AAAAATAGAA GGAAAGTGTA GAAACACTTC TCGTTCGTTC TAATGATTTG
TTTCAACCGT ATCATCAGCT GCTCACACTA TCGGAACAAC AGCCTGCTTC TTCATGACCA AACGCCTCTA CAACTTCTTA CCCGGTGGCC AACCTGACCC GACCATCAAT CCGGTATTCC
TACCCGAGTT AACCACTCAG TGCCCACAAA ATGGTGACAT AAACGTCCGG TTACCAATGG ACCGGATCAG TGAACGTGTA TTCGACAAGC AGATTCTACA AAACATAAAG GATGGTTTCG
CTGTGCTTCA GACCGATGCT GGTCTTTACG AGGATGTGAC GACCCGACGG GTTGTGGATT CCTATCTTGG GATGCTAAAT CCGTTCTTTG GTCCAACGTT CGAGTCCGAT TTCGTAAAGG
CAATAGTGAA GATGGGGAAG ATTGGTGTGA AGACTGATTC TAAAGGGGAG ATTCGACGGG TTTGCTCTGC CTTCAATTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCATGGA CAAAGGCTAA GATGAGTCTA GCTTTGTCTC TGGTTACGGT AATCCTCAGC GTCTCTCTTG CTGATCTAAA AGTCGGGTTT TACTCCAATA CATGTCCTCA AGCCGAGTCA
ATCGTTAGGA GAGTTGTCTC AGGAGCTGCT CTTTCTGACC CTAACCTCCC AGCCATACTT CTACGTCTCC ATTTCCACGA CTGCTTTGTT GAGGGATGTG ATGGCTCGAT CCTCGTGGAT
AACGGAGCAA TCTCTGAAAA GAATGCCTTT GGGCACGAAG GCGTTAGAGG ATTTGAGATA GTAGAAGCCG TCAAAGCCGA GCTTGAAGCT GCATGCCCCG GTGTTGTCTC CTGCTCAGAC
ATTGTTGCCT TGGCGGCACG TGATGCCATA TCTTTGGCAA ATGGACCAGC GTATGAGGTA CCAACTGGGC GGAGAGATGG TCTGGTTTCG AATATGTCGC TGGCTAAGGA CATGCCTGAG
ATCAGCGACA CGATTCAGAT ACTAAAGGCT AAGTTCATGC AGAAGGGGCT CAACGCCAAA GAGCTCGTGC TTCTCAGTGC TGCTCACACT ATCGGAACAA CAGCCTGCTT CTTCATGACC
AAACGCCTCT ACAACTTCTT ACCCGGTGGC CAACCTGACC CGACCATCAA TCCGGTATTC CTACCCGAGT TAACCACTCA GTGCCCACAA AATGGTGACA TAAACGTCCG GTTACCAATG
GACCGGATCA GTGAACGTGT ATTCGACAAG CAGATTCTAC AAAACATAAA GGATGGTTTC GCTGTGCTTC AGACCGATGC TGGTCTTTAC GAGGATGTGA CGACCCGACG GGTTGTGGAT
TCCTATCTTG GGATGCTAAA TCCGTTCTTT GGTCCAACGT TCGAGTCCGA TTTCGTAAAG GCAATAGTGA AGATGGGGAA GATTGGTGTG AAGACTGATT CTAAAGGGGA GATTCGACGG
GTTTGCTCTG CCTTCAATTG A
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCATGGA CAAAGGCTAA GATGAGTCTA GCTTTGTCTC TGGTTACGGT AATCCTCAGC GTCTCTCTTG CTGATCTAAA AGTCGGGTTT TACTCCAATA CATGTCCTCA AGCCGAGTCA
ATCGTTAGGA GAGTTGTCTC AGGAGCTGCT CTTTCTGACC CTAACCTCCC AGCCATACTT CTACGTCTCC ATTTCCACGA CTGCTTTGTT GAGGGATGTG ATGGCTCGAT CCTCGTGGAT
AACGGAGCAA TCTCTGAAAA GAATGCCTTT GGGCACGAAG GCGTTAGAGG ATTTGAGATA GTAGAAGCCG TCAAAGCCGA GCTTGAAGCT GCATGCCCCG GTGTTGTCTC CTGCTCAGAC
ATTGTTGCCT TGGCGGCACG TGATGCCATA TCTTTGGCAA ATGGACCAGC GTATGAGGTA CCAACTGGGC GGAGAGATGG TCTGGTTTCG AATATGTCGC TGGCTAAGGA CATGCCTGAG
ATCAGCGACA CGATTCAGAT ACTAAAGGCT AAGTTCATGC AGAAGGGGCT CAACGCCAAA GAGCTCGTGC TTCTCAGTGC TGCTCACACT ATCGGAACAA CAGCCTGCTT CTTCATGACC
AAACGCCTCT ACAACTTCTT ACCCGGTGGC CAACCTGACC CGACCATCAA TCCGGTATTC CTACCCGAGT TAACCACTCA GTGCCCACAA AATGGTGACA TAAACGTCCG GTTACCAATG
GACCGGATCA GTGAACGTGT ATTCGACAAG CAGATTCTAC AAAACATAAA GGATGGTTTC GCTGTGCTTC AGACCGATGC TGGTCTTTAC GAGGATGTGA CGACCCGACG GGTTGTGGAT
TCCTATCTTG GGATGCTAAA TCCGTTCTTT GGTCCAACGT TCGAGTCCGA TTTCGTAAAG GCAATAGTGA AGATGGGGAA GATTGGTGTG AAGACTGATT CTAAAGGGGA GATTCGACGG
GTTTGCTCTG CCTTCAATTG A
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Retrieve as FASTA
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