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Entry information : PtaAPx06
Entry ID 15174
Creation 2018-04-25 (Christophe Dunand)
Last sequence changes 2018-04-25 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2021-01-06 (Christophe Dunand)
Peroxidase information: PtaAPx06
Name PtaAPx06
Class Ascorbate peroxidase     [Orthogroup: APx004]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaAPx06
start..stop		 S start..stop
GbAPx05 249 2.33e-82 35..238 8..214
EsinAPx01 209 1.49e-66 28..238 5..217
PpeAPx05 192 2.71e-60 26..238 10..205
CclAPx01 192 3.89e-60 60..238 28..205
Literature and cross-references PtaAPx06
EST ref. GenBank:   DR692126.1 [5' end]  DR102537.1 [Fragment]
Protein sequence: PtaAPx06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   238 (302)
PWM (Da):   %s   26347.89 (32844.5)  
PI (pH):   %s   10.21 (8.21) Peptide Signal:   %s   cut: 30 range:30-331
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
YNIVIINDAR ALSIPRLREG KLRLRPRLMA MRVPLQLHFH TRSTFLFSST TPHYSLLRCS VKCNTNPDQV HYQNVQVSVS EQGKYSRRDI MLGSCATAGV SVIWNFSPAL EIASAADLIQ 
RQQRGELLEF IKSSLKNAVE VRPELVPSIL RLALNDAITY DKGSKTGGAN GSIRFISEIN RPENKGLLPV MNLLEEVKNE IDAFSNGGPL SYAYLIQFAG RAATRNTFLS AAIRKCGG 

Retrieve as FASTA  
Remarks Partial from genomic
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TATAATATCG TTATCATCAA CGATGCCAGA GCGTTGTCTA TCCCACGCTT ACGAGAAGGC AAATTGAGGC TGAGGCCGAG ACTAATGGCG ATGAGAGTGC CCCTGCAACT ACACTTCCAT  ACTCGTTCTA CATTCCTATT CTCTTCCACG ACACCACACT ATTCTCTGCT GCGCTGCTCT GTCAAATGTA ACACCAACCC GGATCAAGTC CATTATCAAA ATGTTCAAGT ATCAGTCTCA  GAGCAAGGAA AGTACAGCCG AAGGGACATC ATGTTGGGAT CTTGTGCAAC AGCAGGAGTG TCTGTGATAT GGAACTTTTC ACCAGCTCTT GAAATTGCAT CTGCTGCCGA TTTGATTCAA  CGACAACAAC GGGGCGAATT ATTGGAATTT ATCAAGAGTT CACTAAAAAA TGCTGTAGAG GTTCGTCCGG AGCTTGTTCC ATCGATCCTG AGGTTGGCCT TGAATGATGC AATAACTTAT  GACAAAGGTA GCAAGACTGG TGGGGCAAAT GGTTCAATTA GATTCATTTC AGAGATAAAC AGGCCAGAAA ATAAAGGACT GTTACCTGTA ATGAACTTAT TGGAGGAGGT AAAGAACGAA 
ATTGATGCAT TCTCAAATGG TGGACCACTT TCTTACGCTT ACCTCATCCA ATTTGCAGGA CGAGCAGCAA CCAGAAATAC CTTTCTTAGT GCTGCAATCC GTAAATGTGG TGGC 

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTATAATATC GTTATCATCA ACGATGCCAG AGCGTTGTCT ATCCCACGCT TACGAGAAGG CAAATTGAGG CTGAGGCCGA GACTAATGGC GATGAGAGTG CCCCTGCAAC TACACTTCCA  TACTCGTTCT ACATTCCTAT TCTCTTCCAC GACACCACAC TATTCTCTGC TGCGCTGCTC TGTCAAATGT AACACCAACC CGGATCAAGT CCATTATCAA AATGTTCAAG TATCAGTCTC  AGAGCAAGGA AAGTACAGCC GAAGGGACAT CATGTTGGGA TCTTGTGCAA CAGCAGGAGT GTCTGTGATA TGGAACTTTT CACCAGCTCT TGAAATTGCA TCTGCTGCCG ATTTGATTCA  ACGACAACAA CGGGGCGAAT TATTGGAATT TATCAAGAGT TCACTAAAAA ATGCTGTAGA GGTTCGTCCG GAGCTTGTTC CATCGATCCT GAGGTTGGCC TTGAATGATG CAATAACTTA  TGACAAAGGT AGCAAGACTG GTGGGGCAAA TGGTTCAATT AGATTCATTT CAGAGATAAA CAGGCCAGAA AATAAAGGAC TGTTACCTGT AATGAACTTA TTGGAGGAGG TAAAGAACGA 
AATTGATGCA TTCTCAAATG GTGGACCACT TTCTTACGCT TACCTCATCC AATTTGCAGG ACGAGCAGCA ACCAGAAATA CCTTTCTTAG TGCTGCAATC CGTAAATGTG GTGGC 

Retrieve as FASTA