Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
316 (294) |
| PWM (Da): |
33525.62 (31095.3) |
Transmb domain: |
i7-29o |
| PI (pH): |
7.26 (6.88) |
Peptide Signal: |
cut: 23 range:23-316 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAIRSVVCIS LLILLCSPAI YGQLSSGFYN QSCPNVLSIV NSVVQQAIAQ EKRMGASLLR LHFHDCFVNG CDGSVLLDDN STFTGEKTAK PNNNSLRGFD AVDTIKSQLE AACSGVVSCA
DIVAIAARDS VVQLGGPSWT VLLGRRDSTT ASLSAANNLI PPPTSNLSAL ISSFGAVGLS PDDMVALAGS HTIGQARCTT FRNRIYNESS KDSTFASLTQ ANCPATGGDN NLASLDLLTP
TVFDNNYYNN LKSQKGLLHS DQLLFNGSST DTKVSFYATY PNAFFSDFAG AMVKMGNINP LTGNNGEIRK NCRKTN*
|
Retrieve as FASTA
|
|
| Remarks |
Compete sequence from genomic incorrect prediction, exons 1 and 2 are missing due to scaffold border) and ESTs. |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TGCAGTGGTG TCGTGTCGTG TGCTGATATT GTCGCCATTG CTGCTCGTGA TTCAGTCGTG CAAGTATAAA TTCATCTCGA CACTTCTGAA TTTATTGAAC TTTTTGTCAA TACAATATCT
CATGGAATTG GAGCAATTAA ATAACGTTGT TGGTTCATCT GTATTTGATA GCTGGGAGGC CCATCATGGA CGGTATTGCT AGGGAGGCGA GACTCGACGA CTGCTAGTTT AAGTGCTGCA
AACAATCTCA TTCCCCCTCC CACCTCCAAC CTCAGCGCCC TCATCTCATC ATTTGGAGCA GTGGGACTTT CTCCGGATGA CATGGTCGCA CTTGCAGGTA CTCAGGATTA AACTGTGTTG
GATTTGGAAG CCTTTCTTGG GTTTGTTACA TGATTGATTT AAGGATCAGT TAATTCTAGT ATTTGTTTAT TAATACTGGA TTAGATTAAA TTGGGGTGGA CTTTTGTAAT TTTTTCTGAG
TGGTTTTTCA CATGTGATTG AGTCGAGTTT AGAGGGAAGT ATATCCCCTG AAGAAGCAAC ATATTACATA TATATATATA GGTGAAGCAA GCAAATAGAA TAGTGGAAGC TGTGGATATT
TACAACATAT ACATCAATCA CAACCATCAC ATCAAATCGG TATGCAATCA CTATGATACA ACATAAGCTG CAACCCAGCA CCACTATGGA GAATCGAACA CGGTTGTGGT GCAAGAAAGC
CGACTGCCCT GACCGTAGTA CCATGCACAC ATGCCCCGAG GATACCTTAA TTTTAGCAAT GCATCTATTT ACTAACATCT CACTTGTAGC GATGCATCTA TTTACTAATA CCTCACTTGT
TGGTTTTGTT GTAATCCTGA TCCCAATATG TGCTTGTAAT CCTGATCCCA ACATAAGTTT TGTTGTAATC TTTTTGTTGT AATCCTGATC CCAACATGTG CTTGTTTAGG GTTTAAACTC
TGTAATGCAT CAATTTACTA ACACTTATAG ATTTTGGTAT AATGACAATA GTTAAAAATC CTCTGCATTT GTAACCATTA GTCATCTATA TTGATTGTAA ATTTTAAAAT TCAAAACAAA
TTTTGAAAAT ATTTAAATTC AAAAATAAAT AACAACAAAA TTAATTGCTT AAACTCATTA CTATCAATTT ATTCATTATT CTCAGAATCT ACAATCCAGA TAATTTCAAA TATAACAATT
AATCATGATA TTCCATAATG ACGTATTAAA CTCCTCCTGG TTTGCAGGTT CTCATACAAT TGGCCAAGCG CGTTGCACAA CCTTCAGAAA TCGCATCTAT AATGAATCCA GCAAAGACTC
GACATTCGCC AGCTTAACCC AGGCAAACTG CCCAGCTACA GGAGGTGACA ATAACCTAGC ATCCTTGGAC CTCCTCACTC CCACAGTCTT TGACAATAAC TATTATAACA ATCTGAAGAG
CCAGAAGGGA CTCCTCCACT CTGACCAGCT ATTATTCAAT GGGAGTTCTA CTGATACTAA GGTTTCTTTC TACGCCACCT ATCCAAATGC CTTCTTCAGT GATTTTGCAG GTGCCATGGT
GAAGATGGGG AACATCAATC CTCTCACCGG GAACAATGGA GAGATCCGAA AAAATTGCAG GAAAACCAAC TGA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCAATCA GAAGCGTTGT ATGTATTAGT TTGCTAATTC TTCTATGTTC CCCAGCCATT TATGGGCAAC TTTCCTCAGG TTTTTATAAC CAATCGTGCC CCAATGTGTT GTCCATAGTG
AATTCTGTAG TTCAGCAGGC CATTGCCCAG GAGAAACGGA TGGGGGCGTC GTTGCTGCGC CTTCACTTTC ACGACTGTTT CGTTAATGGT TGCGATGGCT CAGTACTGTT GGACGACAAC
TCGACATTTA CAGGCGAGAA GACCGCAAAA CCTAATAACA ATTCCTTGAG AGGATTTGAT GCTGTAGACA CCATCAAATC TCAACTGGAG GCAGCCTGCA GTGGTGTCGT GTCGTGTGCT
GATATTGTCG CCATTGCTGC TCGTGATTCA GTCGTGCAAC TGGGAGGCCC ATCATGGACG GTATTGCTAG GGAGGCGAGA CTCGACGACT GCTAGTTTAA GTGCTGCAAA CAATCTCATT
CCCCCTCCCA CCTCCAACCT CAGCGCCCTC ATCTCATCAT TTGGAGCAGT GGGACTTTCT CCGGATGACA TGGTCGCACT TGCAGGTTCT CATACAATTG GCCAAGCGCG TTGCACAACC
TTCAGAAATC GCATCTATAA TGAATCCAGC AAAGACTCGA CATTCGCCAG CTTAACCCAG GCAAACTGCC CAGCTACAGG AGGTGACAAT AACCTAGCAT CCTTGGACCT CCTCACTCCC
ACAGTCTTTG ACAATAACTA TTATAACAAT CTGAAGAGCC AGAAGGGACT CCTCCACTCT GACCAGCTAT TATTCAATGG GAGTTCTACT GATACTAAGG TTTCTTTCTA CGCCACCTAT
CCAAATGCCT TCTTCAGTGA TTTTGCAGGT GCCATGGTGA AGATGGGGAA CATCAATCCT CTCACCGGGA ACAATGGAGA GATCCGAAAA AATTGCAGGA AAACCAACTG A
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGTATGCAAT ATTATTATTT CATTTAGCAC AATGGCAATC AGAAGCGTTG TATGTATTAG TTTGCTAATT CTTCTATGTT CCCCAGCCAT TTATGGGCAA CTTTCCTCAG GTTTTTATAA
CCAATCGTGC CCCAATGTGT TGTCCATAGT GAATTCTGTA GTTCAGCAGG CCATTGCCCA GGAGAAACGG ATGGGGGCGT CGTTGCTGCG CCTTCACTTT CACGACTGTT TCGTTAATGG
TTGCGATGGC TCAGTACTGT TGGACGACAA CTCGACATTT ACAGGCGAGA AGACCGCAAA ACCTAATAAC AATTCCTTGA GAGGATTTGA TGCTGTAGAC ACCATCAAAT CTCAACTGGA
GGCAGCCTGC AGTGGTGTCG TGTCGTGTGC TGATATTGTC GCCATTGCTG CTCGTGATTC AGTCGTGCAA CTGGGAGGCC CATCATGGAC GGTATTGCTA GGGAGGCGAG ACTCGACGAC
TGCTAGTTTA AGTGCTGCAA ACAATCTCAT TCCCCCTCCC ACCTCCAACC TCAGCGCCCT CATCTCATCA TTTGGAGCAG TGGGACTTTC TCCGGATGAC ATGGTCGCAC TTGCAGGTTC
TCATACAATT GGCCAAGCGC GTTGCACAAC CTTCAGAAAT CGCATCTATA ATGAATCCAG CAAAGACTCG ACATTCGCCA GCTTAACCCA GGCAAACTGC CCAGCTACAG GAGGTGACAA
TAACCTAGCA TCCTTGGACC TCCTCACTCC CACAGTCTTT GACAATAACT ATTATAACAA TCTGAAGAGC CAGAAGGGAC TCCTCCACTC TGACCAGCTA TTATTCAATG GGAGTTCTAC
TGATACTAAG GTTTCTTTCT ACGCCACCTA TCCAAATGCC TTCTTCAGTG ATTTTGCAGG TGCCATGGTG AAGATGGGGA ACATCAATCC TCTCACCGGG AACAATGGAG AGATCCGAAA
AAATTGCAGG AAAACCAACT GATGCCTGGA GCTCCTCCTC TCAGAATTGC CATGATTTTT TTTTTAAGAG ATAGATTCAT TTCCTGCGAA ATCACCTCCA TCGTAAAAGC TATATTTAGT
TTTCTAGCCT AAAGGTCTCA TGTATTTGGA TTGAGAATCT GTATTCAATA ACAAATTGCA GAAATAAACC TGAAGTGGCT G
|
Retrieve as FASTA
|
|
