Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
375 (356) |
| PWM (Da): |
39478.47 (37397.4) |
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| PI (pH): |
4.27 (4.23) |
Peptide Signal: |
cut: 20 range:20-375 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAFKYIATIM VVATVGVQAA NFKRVPCPNG KNSATNPTCC SFFALRDDLQ ANLFDNQCGE DTHEVVRLTF HDAIAFSSSL KEQGKPAGGG ADGSMLIFPD IEPNFAANNG ISDSVDSLLP
FLQKYPDISA GDLIQFAGAV GISNCPGAPK LEFKAGRPNA TAPAPEGLIP EPQDSVDKIL ARFMDSGGFT PNEVIALLAS HSIARADKVD PQIEAAPFDS TPFTFDTQVY LEVLLRGVGF
PGSGNNTGEV LSPLPLGLGD NVGELRLQSD FALARDQRTA CTWQGFINEQ QKMADAFKAA MAKLAVNGQD TTSFIDCSEA VPYPVPADGK AATFPATKTQ ADIEQVCSGP FPSLAADPGP
TETIIPHEPP STSSS*
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Retrieve as FASTA
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| Remarks |
fgenesh2_kg.1081_#_1_#_Locus1731v1rpkm109.14 Ramac1 |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTTCA AATACATTGC GACGATTATG GTCGTCGCCA CTGTCGGCGT GCAGGCCGCT AACTTCAAGC GTGTTCCTTG CCCCAACGGC AAGAATAGTG CTACGAACCC CACCTGTTGT
TCTTTCTTTG CTCTGCGTGA CGACCTTCAA GCGAATCTGT AAGATAGGTT CCTCTTCTAC GAGTGCATTA GTAGGCTGAC ATCTGCGCAG GTTTGACAAC CAATGCGGGG AGGACACACA
TGAGGTCGTC CGCCTTACCT TCCGTTCGTC CTTCTCCTTC TGCGTTGGAC CCCTTCTTAA TATTTCCACA GACGATGCAA TCGCATTCTC TTCCTCTCTC AAGGAGCAAG GCAAACCTGC
TGGTGGCGGC GCCGATGGCT CAATGCTTAT ATTCCCTGAT ATCGAGCCGA ACTTCGCCGC AAACAACGGT ATATCCGATA GTGTCGACAG TCTTCTTCCT TTCCTTCAGA AGTATCCAGA
TATCAGCGCA GGCGATCTCA TCCAGTTTGC AGGAGCCGTC GGGATTTCCA ACTGTCCAGG CGCACCCAAG CTAGAATTTA AAGCCGGCCG GCCCAATGCT ACTGCGCCTG CGCCGGAGGG
CCTTATCCCA GAACCACAAG ATTCTGTTGA CAAGATCCTC GCGCGGTTTA TGGACAGTGG AGGATTCACC CCCAACGAGG TCATTGCACT TTTGGCCTCC CACTCGATCG CACGCGCAGA
CAAGGTCGAC CCGCAAATCG AAGCGGCTCC TTTCGACTCT ACGCCTTTCA CGTTCGACAC TCAGGTCTAT CTTGAAGTTT TGCTCAGGGG TGTTGGCTTC CCTGGCTCCG GAAACAACAC
TGGTCAGCAT GTTGAATCCA TCCTGTGCTC TTACCAACAT GTATTGTGTC CATTCAGGCG AGGTCTTATC TCCTCTTCCT CTAGGCCTCG GCGACAATGT CGGCGAGTTG CGTCTCCAAT
CTGACTTTGC TCTCGCTCGC GACCAGCGGA CTGCATGCAC ATGGCAAGGG TTCATCAACG AACAGCAAAA GATGGCGGAT GCCTTCAAAG CTGCCATGGC TAAGCTTGCC GTCAACGGCC
AGGACACAAC GAGTTTCATT GATTGCTCTG AAGCTGTCCC GTATCCTGTT CCCGCTGATG GCAAGGCCGC AACGTGAGTA CCTTGCGTCA TGCGCGACCG CGCGACGTGG CTGATGTTGA
TGCACGCAGC TTCCCCGCAA CAAAGACTCA AGCCGATATC GAGCAAGTAT GCAGTGGCCC CTTCCCTTCC CTCGCGGCTG ACCCTGGACC AACTGAGACA ATCATCCCGT GAGATATATT
GACACCTTCG CATGTCTTAT TAACGAATGT TGTATGCAGT CACGAACCTC CTTCAACGAG CTCTAGTTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTTCA AATACATTGC GACGATTATG GTCGTCGCCA CTGTCGGCGT GCAGGCCGCT AACTTCAAGC GTGTTCCTTG CCCCAACGGC AAGAATAGTG CTACGAACCC CACCTGTTGT
TCTTTCTTTG CTCTGCGTGA CGACCTTCAA GCGAATCTGT TTGACAACCA ATGCGGGGAG GACACACATG AGGTCGTCCG CCTTACCTTC CACGATGCAA TCGCATTCTC TTCCTCTCTC
AAGGAGCAAG GCAAACCTGC TGGTGGCGGC GCCGATGGCT CAATGCTTAT ATTCCCTGAT ATCGAGCCGA ACTTCGCCGC AAACAACGGT ATATCCGATA GTGTCGACAG TCTTCTTCCT
TTCCTTCAGA AGTATCCAGA TATCAGCGCA GGCGATCTCA TCCAGTTTGC AGGAGCCGTC GGGATTTCCA ACTGTCCAGG CGCACCCAAG CTAGAATTTA AAGCCGGCCG GCCCAATGCT
ACTGCGCCTG CGCCGGAGGG CCTTATCCCA GAACCACAAG ATTCTGTTGA CAAGATCCTC GCGCGGTTTA TGGACAGTGG AGGATTCACC CCCAACGAGG TCATTGCACT TTTGGCCTCC
CACTCGATCG CACGCGCAGA CAAGGTCGAC CCGCAAATCG AAGCGGCTCC TTTCGACTCT ACGCCTTTCA CGTTCGACAC TCAGGTCTAT CTTGAAGTTT TGCTCAGGGG TGTTGGCTTC
CCTGGCTCCG GAAACAACAC TGGCGAGGTC TTATCTCCTC TTCCTCTAGG CCTCGGCGAC AATGTCGGCG AGTTGCGTCT CCAATCTGAC TTTGCTCTCG CTCGCGACCA GCGGACTGCA
TGCACATGGC AAGGGTTCAT CAACGAACAG CAAAAGATGG CGGATGCCTT CAAAGCTGCC ATGGCTAAGC TTGCCGTCAA CGGCCAGGAC ACAACGAGTT TCATTGATTG CTCTGAAGCT
GTCCCGTATC CTGTTCCCGC TGATGGCAAG GCCGCAACCT TCCCCGCAAC AAAGACTCAA GCCGATATCG AGCAAGTATG CAGTGGCCCC TTCCCTTCCC TCGCGGCTGA CCCTGGACCA
ACTGAGACAA TCATCCCTCA CGAACCTCCT TCAACGAGCT CTAGTTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGTCTTGACA GAAGCAACGA TGCTTTAGAC ACAGCCTGAG GTGAGTGTAT TCAAAGTTGA ATGCAGATCC GAGATCGTAT ATGGTGGCGC AAGGCGCCGT GCAACCCAAG TGGAGCCAAG
TGCAGGTTTC TATTCATTGT ATTTATCCTC TTCATGGCAA CCACTCTGCC TCTGACTCGG ATTTCCTTTC ATTTAATTCA TTATGTATAT TAAATAATGC ACCGCTTCTA TTGATGGTTT
TCAACCCAGC CAAAGTATAA AGCATGAAGG TTAACGACAC ATACGACTCA ACCTATTATC ACTTCCCTAT ATTTCTTTTA CTCGTACTCT TTTACTTTAA TGGCTTTCAA ATACATTGCG
ACGATTATGG TCGTCGCCAC TGTCGGCGTG CAGGCCGCTA ACTTCAAGCG TGTTCCTTGC CCCAACGGCA AGAATAGTGC TACGAACCCC ACCTGTTGTT CTTTCTTTGC TCTGCGTGAC
GACCTTCAAG CGAATCTGTT TGACAACCAA TGCGGGGAGG ACACACATGA GGTCGTCCGC CTTACCTTCC ACGATGCAAT CGCATTCTCT TCCTCTCTCA AGGAGCAAGG CAAACCTGCT
GGTGGCGGCG CCGATGGCTC AATGCTTATA TTCCCTGATA TCGAGCCGAA CTTCGCCGCA AACAACGGTA TATCCGATAG TGTCGACAGT CTTCTTCCTT TCCTTCAGAA GTATCCAGAT
ATCAGCGCAG GCGATCTCAT CCAGTTTGCA GGAGCCGTCG GGATTTCCAA CTGTCCAGGC GCACCCAAGC TAGAATTTAA AGCCGGCCGG CCCAATGCTA CTGCGCCTGC GCCGGAGGGC
CTTATCCCAG AACCACAAGA TTCTGTTGAC AAGATCCTCG CGCGGTTTAT GGACAGTGGA GGATTCACCC CCAACGAGGT CATTGCACTT TTGGCCTCCC ACTCGATCGC ACGCGCAGAC
AAGGTCGACC CGCAAATCGA AGCGGCTCCT TTCGACTCTA CGCCTTTCAC GTTCGACACT CAGGTCTATC TTGAAGTTTT GCTCAGGGGT GTTGGCTTCC CTGGCTCCGG AAACAACACT
GGCGAGGTCT TATCTCCTCT TCCTCTAGGC CTCGGCGACA ATGTCGGCGA GTTGCGTCTC CAATCTGACT TTGCTCTCGC TCGCGACCAG CGGACTGCAT GCACATGGCA AGGGTTCATC
AACGAACAGC AAAAGATGGC GGATGCCTTC AAAGCTGCCA TGGCTAAGCT TGCCGTCAAC GGCCAGGACA CAACGAGTTT CATTGATTGC TCTGAAGCTG TCCCGTATCC TGTTCCCGCT
GATGGCAAGG CCGCAACCTT CCCCGCAACA AAGACTCAAG CCGATATCGA GCAAGTATGC AGTGGCCCCT TCCCTTCCCT CGCGGCTGAC CCTGGACCAA CTGAGACAAT CATCCCTCAC
GAACCTCCTT CAACGAGCTC TAGTTGAACG AAATGACTGA CATCACGAAA CCTTCGCCGC CCTATATTAT CTTCGACCTC TGGGAGGTGT CTATCCTTGA TTATTTAAAT CGTTGAGAC
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Retrieve as FASTA
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