Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
327 (363) |
PWM (Da): |
34574.46 (37733.5) |
Transmb domain: |
i106-125o |
PI (pH): |
8.2 (4.23) |
Peptide Signal: |
cut: 19 range:19-381 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MYIRNVLISG LAAASTVQAY SNYTIREEEW IVAPPAPVQE KRTIGRILGL FGGLFGGNKE PAQECPAIWT QISSTLTQQF LGDGQCTDAA RAAIRSSFHD CFNGACDGSL ILAQECSNTE
NRGLERLCGN LANVASQTKV GVADLIQFAA AHAVKTCPGG PTIPVKVGRK DSSEANALGV LPSGFAKGGD LVKLFASKGF SPYDLAALIG AHTAAKQRVT DPSKAGAALD STVGTWDNKY
YSETKRGSAP FTLESDKNIA QNPLTAIPFS TFAASKGMWD SAFVGAMVKM SMLGVEDTNL IDCTSALPGG SKKRDVKSSN LFDRLKW*
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Retrieve as FASTA
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Remarks |
fgenesh1_kg.18_#_51_#_Locus12788v1rpkm0.66 Altal1 |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTATATTC GTAACGTTCT CATCTCTGGT CTTGCGGCTG CCAGCACAGT CCAGGCCTAC TCCAATTACA CCATCCGAGA AGAGGAGTGG ATCGTAGCAC CGCCAGCACC GGTACAGGAG
AAGCGCACCA TAGGAAGGAT CCTTGGTCTG TTTGGCGGCC TCTTCGGTGG TAACAAGGAG CCTGCGCAGG AATGTCCTGC CATCTGGACT CAAATCTCTT CCACCCTCAC TCAGCAATTC
CTCGGAGACG GGCAGTGCAC AGATGCTGCC CGTGCTGCTA TCCGATCTTC TTTCCACGAC TGCTTTAACG GAGCTTGTGA TGGGTCTCTC ATCCTCGCAC AAGAGTGCTC GAACACTGAG
AACCGTGGCC TAGAACGCCT TTGCGGCAAC CTCGCCAATG TTGCCTCCCA AACTAAAGTC GGTGTTGCCG ATCTCATCCA GTTTGCTGCC GCACACGCAG TCAAAACATG CCCTGGTGGA
CCTACCATTC CCGTCAAAGT TGGTCGCAAG GACTCCAGCG AGGCAAACGC GCTCGGCGTT CTACCCAGCG GCTTCGCTAA AGGAGGAGAC TTAGTCAAGC TCTTCGGTAA GCCTTCATCT
TCCAGCTTGT CATATCCACG TAGCTAACAC CGTTTCTAGC ATCAAAAGGC TTCTCCCCTT ATGACCTTGC TGCCCTCATC GGTGCTCACA CTGCTGCCAA ACAACGTGTC ACAGACCCTT
CCAAAGCCGG TGCCGCGCTC GACTCTACTG TCGGTACCTG GGATAACAAA TACTACTCCG AGACCAAACG TGGCTCGGCT CCCTTCACGC TCGAGTCTGA CAAGAACATT GCACAGAACC
CTCTCACCGC CATCCCCTTC TCCACCTTTG CCGCCAGCAA GGGCATGTGG GATTCGGCCT TCGTAGGTGC AATGGTCAAG ATGAGCATGC TCGGTGTTGA GGACACGAAC TTGATCGACT
GCACCAGTGC ACTACCTGGT GGCAGCAAGA AGAGGGATGT GAAGAGCAGC AACCTCTTCG ACCGCCTCAA ATGGTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTATATTC GTAACGTTCT CATCTCTGGT CTTGCGGCTG CCAGCACAGT CCAGGCCTAC TCCAATTACA CCATCCGAGA AGAGGAGTGG ATCGTAGCAC CGCCAGCACC GGTACAGGAG
AAGCGCACCA TAGGAAGGAT CCTTGGTCTG TTTGGCGGCC TCTTCGGTGG TAACAAGGAG CCTGCGCAGG AATGTCCTGC CATCTGGACT CAAATCTCTT CCACCCTCAC TCAGCAATTC
CTCGGAGACG GGCAGTGCAC AGATGCTGCC CGTGCTGCTA TCCGATCTTC TTTCCACGAC TGCTTTAACG GAGCTTGTGA TGGGTCTCTC ATCCTCGCAC AAGAGTGCTC GAACACTGAG
AACCGTGGCC TAGAACGCCT TTGCGGCAAC CTCGCCAATG TTGCCTCCCA AACTAAAGTC GGTGTTGCCG ATCTCATCCA GTTTGCTGCC GCACACGCAG TCAAAACATG CCCTGGTGGA
CCTACCATTC CCGTCAAAGT TGGTCGCAAG GACTCCAGCG AGGCAAACGC GCTCGGCGTT CTACCCAGCG GCTTCGCTAA AGGAGGAGAC TTAGTCAAGC TCTTCGCATC AAAAGGCTTC
TCCCCTTATG ACCTTGCTGC CCTCATCGGT GCTCACACTG CTGCCAAACA ACGTGTCACA GACCCTTCCA AAGCCGGTGC CGCGCTCGAC TCTACTGTCG GTACCTGGGA TAACAAATAC
TACTCCGAGA CCAAACGTGG CTCGGCTCCC TTCACGCTCG AGTCTGACAA GAACATTGCA CAGAACCCTC TCACCGCCAT CCCCTTCTCC ACCTTTGCCG CCAGCAAGGG CATGTGGGAT
TCGGCCTTCG TAGGTGCAAT GGTCAAGATG AGCATGCTCG GTGTTGAGGA CACGAACTTG ATCGACTGCA CCAGTGCACT ACCTGGTGGC AGCAAGAAGA GGGATGTGAA GAGCAGCAAC
CTCTTCGACC GCCTCAAATG GTAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CACAGTCATT CGCTCTTTCG CTTCTTAGCA CATCTTGCCT GCCCTATCTT CTCATAATCC TATCAGTCCT CCATTCGATA GGTTTACTAT CTTCTCTTCA CATACATAAT GTATATTCGT
AACGTTCTCA TCTCTGGTCT TGCGGCTGCC AGCACAGTCC AGGCCTACTC CAATTACACC ATCCGAGAAG AGGAGTGGAT CGTAGCACCG CCAGCACCGG TACAGGAGAA GCGCACCATA
GGAAGGATCC TTGGTCTGTT TGGCGGCCTC TTCGGTGGTA ACAAGGAGCC TGCGCAGGAA TGTCCTGCCA TCTGGACTCA AATCTCTTCC ACCCTCACTC AGCAATTCCT CGGAGACGGG
CAGTGCACAG ATGCTGCCCG TGCTGCTATC CGATCTTCTT TCCACGACTG CTTTAACGGA GCTTGTGATG GGTCTCTCAT CCTCGCACAA GAGTGCTCGA ACACTGAGAA CCGTGGCCTA
GAACGCCTTT GCGGCAACCT CGCCAATGTT GCCTCCCAAA CTAAAGTCGG TGTTGCCGAT CTCATCCAGT TTGCTGCCGC ACACGCAGTC AAAACATGCC CTGGTGGACC TACCATTCCC
GTCAAAGTTG GTCGCAAGGA CTCCAGCGAG GCAAACGCGC TCGGCGTTCT ACCCAGCGGC TTCGCTAAAG GAGGAGACTT AGTCAAGCTC TTCGCATCAA AAGGCTTCTC CCCTTATGAC
CTTGCTGCCC TCATCGGTGC TCACACTGCT GCCAAACAAC GTGTCACAGA CCCTTCCAAA GCCGGTGCCG CGCTCGACTC TACTGTCGGT ACCTGGGATA ACAAATACTA CTCCGAGACC
AAACGTGGCT CGGCTCCCTT CACGCTCGAG TCTGACAAGA ACATTGCACA GAACCCTCTC ACCGCCATCC CCTTCTCCAC CTTTGCCGCC AGCAAGGGCA TGTGGGATTC GGCCTTCGTA
GGTGCAATGG TCAAGATGAG CATGCTCGGT GTTGAGGACA CGAACTTGAT CGACTGCACC AGTGCACTAC CTGGTGGCAG CAAGAAGAGG GATGTGAAGA GCAGCAACCT CTTCGACCGC
CTCAAATGGT AGAGTGGGCG TCATGCATGG TCTGGGCATT TTCGGGCGTT ACGATATCTC TTTATCCATC ATCTCCTGCT GGAACTTCAC GACTCTCATT GATGGCACAT GCTAGTCATG
TTTTCTTGTT TATGTCATAT CTTATCTTAA GCGAAGGGAA AGGTGTCTGG TAGTACGCTC CATGAC
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Retrieve as FASTA
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