Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
329 (301) |
| PWM (Da): |
35624.66 (32614.1) |
Transmb domain: |
i7-29o |
| PI (pH): |
4.59 (4.56) |
Peptide Signal: |
cut: 29 range:29-329 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASDGPRLQC TTFTSILVFV FAAVAAEAQL STKFYDSTCP QAASIVQAKV DAFVEGDRGL AAALMRLHFH DCFVRGCDGS VLLNSTDPNI LTEKSALLNN NSLRGFEQID EIKMELECAC
PGVVSCADIL ALVARDATVK VGGLRWPVFL GRVDGAGSFA DEVNGSLPER RDNFTKLVET FAKVGLDAKD MIILSGGHSI GQVHCGAFFE RLYNFQGLNI TDPSMDPEFA VMLKAQCPQT
KPFGFMALDA TNGTFDSTYY LDLLTNKGLL ESDVALLSDP LGVEYAVKAV MDPSAFLFEF GMAMIKMGNI PASDPYGWRK HCAFTEPKL*
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (contig_9350:24159-25865) and RNA seq (isotig22658) |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCAG ACGGACCAAG ATTGCAGTGT ACGACGTTCA CTTCCATCCT CGTCTTCGTA TTCGCAGCAG TTGCTGCAGA GGCGCAACTG TCGACGAAAT TTTATGACTC CACTTGTCCA
CAAGCCGCAT CTATAGTGCA AGCAAAGGTT GATGCTATTG TTGAGGGTGA TCGGGGATTG GCAGCAGCTC TGATGCGTCT CCACTTCCAT GACTGCTTCG TCCGAGTAAG ATTGGCACCG
TCAAGTAGCT GACAGAAAGT ACTTTTGATG TATTTCCAGC TGAGCTCTCT ACAAACTATA TGAGCTTGCA AATAGTAATA TCTCACATCT TGTCAACCGT AGATTTTTTC GCCAGACTAC
ATCCATCTGT AGACAGACAT ACTCATCTGA TTCATGAGTG AAGATATTCT GCTTCATTTT TAGCTTCTCG ACTGGACCTC TTACCTAAGC TTGGTTGAAC TCGTTAGACG ATTTGGAGTC
ATCTGATTGA AAGCCACTTG TGTGCGTACA GGGTTGCGAT GGATCCGTGC TTCTCAACTC AACCGATCCT AATATTCTCA CAGAAAAGTC CGCGCTGCTA AACAACAATT CTCTCAGAGG
ATTTGAACAA ATTGATGAGA TCAAAATGGA GCTGGAATGT GCATGCCCAG GTGTTGTTTC ATGTGCAGAT ATTTTAGCTC TGGTGGCCCG TGATGCGACT GTCAAGGTAC GAAAAGGGTT
CTTTTGTCTT CGTCAGGTTA AATCATTCAT CTAAACGCAG TCATCTGAGT CAGTATATCT GTACTCTTGA AATTTGAGTT TCAAGAGTAC AGCATTTCCT TCAGGTCTCG ATCCTGGAGC
TGTCAATTTC TACATGTCTA ATAGAAATCA TGGAAGAGAA AATACGCGGA CGATTTAAAG AAATATCGTT GCCTGGATTA CTTACAAAGA ATCCCATTCC TGTTGATGAG TACACAGGTT
GGTGGCTTGA GCTGGCCAGT ATTTCTGGGC CGCGTTGATG GTGCAGGCTC ATTTGCAGAT GAGGTCAATG GCAGCTTGCC TGAACGGAGA GACAACTTTA CTAAACTTGT CGAAACCTTC
GCCAAAGTTG GACTTGATGC TAAGGACATG ATCATCCTCT CAGGTACTAT TCCTCACATT TGTTTGTCAG GTCATTGTTT CAGTAAAGCT TTACGTGTAT CTGCATTAAT TAGGAATACC
CTGTACATTC AAAGCTTTCA TTGTTGAAGT CGATGACTCA TGCATCATGA GACATAATTT CATACAGCAT TGCTGATTTG GCTAATCTTC AATGCACCTT TAGGTGGACA TTCTATCGGG
CAAGTTCACT GTGGCGCCTT CTTCGAGCGT CTGTACAACT TTCAAGGTCT AAATATCACA GATCCATCAA TGGACCCTGA GTTTGCTGTC ATGCTTAAGG CTCAGTGCCC TCAGACCAAG
CCTTTCGGCT TCATGGCTCT GGATGCCACC AACGGCACTT TCGATTCTAC TTACTATCTG GACCTTTTGA CCAACAAAGG TCTCCTTGAG TCGGATGTGG CACTGTTGAG TGATCCTTTG
GGTGTAGAGT ATGCAGTCAA AGCTGTGATG GATCCAAGCG CCTTTCTGTT TGAATTCGGA ATGGCAATGA TCAAAATGGG CAACATTCCA GCGAGTGACC CTTACGGCTG GAGAAAGCAT
TGCGCTTTCA CCGAACCAAA ATTGTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCAG ACGGACCAAG ATTGCAGTGT ACGACGTTCA CTTCCATCCT CGTCTTCGTA TTCGCAGCAG TTGCTGCAGA GGCGCAACTG TCGACGAAAT TTTATGACTC CACTTGTCCA
CAAGCCGCAT CTATAGTGCA AGCAAAGGTT GATGCTTTTG TTGAGGGTGA TCGGGGATTG GCAGCAGCTC TGATGCGTCT CCACTTCCAT GACTGCTTCG TCCGAGGTTG CGATGGATCC
GTGCTTCTCA ACTCAACCGA TCCTAATATT CTCACAGAAA AGTCTGCGCT GCTAAACAAC AATTCTCTCA GAGGATTTGA ACAAATTGAT GAGATCAAAA TGGAGCTGGA ATGTGCATGC
CCAGGTGTTG TTTCATGTGC AGATATTCTA GCTCTGGTGG CCCGTGATGC GACTGTCAAG GTTGGTGGCT TGAGGTGGCC AGTATTTCTG GGCCGCGTTG ATGGTGCAGG CTCATTTGCA
GATGAGGTCA ATGGCAGCTT GCCTGAACGG AGAGACAACT TTACTAAACT TGTCGAAACC TTCGCCAAAG TTGGACTTGA TGCTAAGGAC ATGATCATCC TCTCAGGTGG ACATTCTATC
GGGCAAGTTC ACTGTGGCGC CTTCTTCGAG CGTCTGTACA ACTTTCAAGG TCTAAATATC ACAGATCCAT CAATGGACCC TGAGTTTGCT GTCATGCTTA AGGCTCAGTG CCCTCAGACC
AAGCCTTTCG GCTTCATGGC TCTGGATGCC ACCAACGGCA CTTTCGATTC TACTTACTAT CTGGACCTTT TGACCAACAA AGGTCTCCTT GAGTCGGATG TGGCACTGTT GAGTGATCCT
TTGGGTGTAG AGTATGCAGT CAAAGCTGTG ATGGATCCAA GCGCCTTTCT GTTTGAATTC GGAATGGCAA TGATCAAAAT GGGCAACATT CCAGCGAGTG ACCCTTACGG CTGGAGAAAG
CATTGCGCTT TCACCGAACC AAAATTGTAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CCACAGAACC GGCCGCAGCA ACAAACATTG AGGAGAAGCA GTGGTATCAA CGCAGAGTAC GGGGGGAAGG AAACAAGCTC ATTTTGGGCC TTCTCATCAA CCTCGGGCTC TGCTTGAAGG
TGGTTCTGAC TCTACTAAAT CTGGTGGTCA AACTGCTTTT GAGAAGGTTC GATATTTGTC GGTTTTTCAT CGAGACCGAC CAAAGGATCT GAAATCCAAT AGTCATAATG GCTTCAGACG
GACCAAGATT GCAGTGTACG ACGTTCACTT CCATCCTCGT CTTCGTATTC GCAGCAGTTG CTGCAGAGGC GCAACTGTCG ACGAAATTTT ATGACTCCAC TTGTCCACAA GCCGCATCTA
TAGTGCAAGC AAAGGTTGAT GCTTTTGTTG AGGGTGATCG GGGATTGGCA GCAGCTCTGA TGCGTCTCCA CTTCCATGAC TGCTTCGTCC GAGGTTGCGA TGGATCCGTG CTTCTCAACT
CAACCGATCC TAATATTCTC ACAGAAAAGT CTGCGCTGCT AAACAACAAT TCTCTCAGAG GATTTGAACA AATTGATGAG ATCAAAATGG AGCTGGAATG TGCATGCCCA GGTGTTGTTT
CATGTGCAGA TATTCTAGCT CTGGTGGCCC GTGATGCGAC TGTCAAGGTT GGTGGCTTGA GGTGGCCAGT ATTTCTGGGC CGCGTTGATG GTGCAGGCTC ATTTGCAGAT GAGGTCAATG
GCAGCTTGCC TGAACGGAGA GACAACTTTA CTAAACTTGT CGAAACCTTC GCCAAAGTTG GACTTGATGC TAAGGACATG ATCATCCTCT CAGGTGGACA TTCTATCGGG CAAGTTCACT
GTGGCGCCTT CTTCGAGCGT CTGTACAACT TTCAAGGTCT AAATATCACA GATCCATCAA TGGACCCTGA GTTTGCTGTC ATGCTTAAGG CTCAGTGCCC TCAGACCAAG CCTTTCGGCT
TCATGGCTCT GGATGCCACC AACGGCACTT TCGATTCTAC TTACTATCTG GACCTTTTGA CCAACAAAGG TCTCCTTGAG TCGGATGTGG CACTGTTGAG TGATCCTTTG GGTGTAGAGT
ATGCAGTCAA AGCTGTGATG GATCCAAGCG CCTTTCTGTT TGAATTCGGA ATGGCAATGA TCAAAATGGG CAACATTCCA GCGAGTGACC CTTACGGCTG GAGAAAGCAT TGCGCTTTCA
CCGAACCAAA ATTGTAGGCC CGGCTGAATT CTTGCGGATT TGACGACTAT CTGCAATAAG CATGCAAGGT CGTGCTCTCT GCTTTATGAG GCAGATCTTA GGAATAAGTT TCTGTTGCCT
CTATTATTTT GATCACGGTT CATTATTTAT GAAATTGCGG TCTAATTGGA TCGCTGTAGA GATATTTGGT CGAACATTAG CTCGAGATGG AAGGTGAGGC TAATGTAGCT GTAGGTGCCG
TTGAGGAGCA GATTGGTTTC TTGTGTACAA AATTTCTTAA AACAAGGGAA AAATTGAATC GATTTTTTAT AAAACAATTT TT
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Retrieve as FASTA
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