Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
323 (299) |
| PWM (Da): |
34768.66 (32251.4) |
|
| PI (pH): |
8.85 (8.93) |
Peptide Signal: |
cut: 25 range:25-323 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MANARVKAFA ILCIVALCLQ MADAQGRGLR VNFYQRSCPR AEQIIRGVVD SAFARDPTIP AGLIRMFFHD CFVRGCDASV LLDNADSEKL GAPNANSLRG FEVLDEAKAA LEAACPRTVS
CADVIAYAAR DAMEVAGSVK VPNWLAGRRD GSTSISAETL TELPAPFSNF TTLQRAFERK GLNQADLVIL SGAHTVGFAR CGIILQRLYN FKGTGQADPA INPSYLQTLR NLCPSNAPGK
QINMEMMTPN RIDANYFNDV QAGRGLFESD NALRTTPIGR SLVSVYRVPQ VFNAAFVASM RKMGNIGVLT GSSGKIRTQC NIA
|
Retrieve as FASTA
|
|
| Remarks |
Complete sequence from genomic ( 3 introns, contig_637:19658-21024) and RNA seq (isotig28631 and isotig39518). |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTAATG CACGTGTTAA AGCCTTTGCT ATCCTATGCA TAGTAGCACT CTGCCTGCAA ATGGCAGATG CTCAAGGAAG GGGATTAAGA GTTAATTTCT ACCAGAGGTC GTGTCCTCGC
GCCGAGCAGA TCATCAGAGG GGTTGTAGAC AGTGCGTTCG CCAGAGATCC TACAATCCCC GCTGGACTCA TTCGAATGTT CTTTCACGAC TGCTTCGTCA GAGTAAATCT CAGTCGACTG
TTGAGATGGT TATTTCATTT CTGTGCCGCA ACAAGAATAT TCACCGCATC CAAAATTCTT GTCTATCTAG TTACGCGCTT GCAGCAGCAG GTATAAGTGT TCTCTGATTT AATGGTATTC
AGCTCACTTT CGCGGGCATT GATTTGCAGG GTTGTGATGC CTCTGTGCTT CTGGACAATG CCGATTCCGA GAAGCTGGGT GCTCCCAACG CCAATTCTCT CCGGGGATTT GAAGTCTTGG
ACGAAGCGAA AGCAGCCCTG GAAGCAGCTT GCCCGAGAAC CGTCTCATGC GCCGATGTTA TCGCGTACGC TGCCCGTGAC GCCATGGAAG TGGTAAGAAG ACGGCCATCA TGAGCAAAAA
GCACTCTTTT GTTTATGCCA CTCAGGCGTT CCGACATTCA AAGCTCAAAT TTAATTTATA TATTTACTCT TGGCAGGCCG GAAGCGTGAA AGTGCCCAAC TGGCTCGCTG GACGAAGGGA
CGGGTCGACT TCCATCTCGG CTGAAACTTT GACCGAATTA CCCGCTCCTT TCTCCAACTT CACCACTTTG CAGAGGGCAT TCGAGAGGAA GGGTCTCAAC CAGGCCGATC TCGTCATTCT
CTCAGGTGAG ATTTTGATTC TCAGTTTCTG ATGTTTAATG TCACTTGCAC GCAGAGACCA CTGGAGAAAG CTTCGACTGT TAATCGTGAC TGGAATTGAG TCGACTGATT GCTTGCTTGC
TACCTACAGG TGCCCACACC GTCGGATTTG CTAGGTGCGG TATCATTCTT CAGCGTCTTT ACAACTTCAA GGGTACCGGT CAAGCCGACC CCGCTATCAA CCCGAGCTAT CTCCAAACCT
TGAGGAACCT TTGCCCATCC AACGCACCCG GTAAGCAGAT CAACATGGAG ATGATGACTC CCAACAGGAT CGACGCCAAC TACTTCAACG ATGTTCAAGC AGGACGTGGT CTTTTCGAGT
CCGACAACGC TCTGAGAACC ACTCCCATCG GAAGATCCCT CGTCAGCGTT TACAGAGTTC CCCAGGTTTT CAACGCTGCA TTCGTCGCCT CCATGAGGAA GATGGGCAAC ATCGGAGTTC
TTACCGGCAG CAGCGGAAAG ATCCGCACCC AGTGCAATAT TGCGTAG
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTAATG CACGTGTTAA AGCCTTTGCT ATCCTATGCA TAGTAGCACT CTGCCTGCAA ATGGCAGATG CTCAAGGAAG GGGATTAAGA GTTAATTTCT ACCAGAGGTC GTGTCCTCGC
GCCGAGCAGA TCATCAGAGG GGTTGTAGAC AGTGCGTTCG CCAGAGATCC TACAATCCCC GCTGGACTCA TTCGAATGTT CTTTCACGAC TGCTTCGTCA GAGGTTGTGA TGCCTCTGTG
CTTCTGGACA ATGCCGATTC CGAGAAGCTG GGTGCTCCCA ACGCCAATTC TCTCCGGGGA TTTGAAGTCT TGGACGAAGC GAAAGCAGCC CTGGAAGCAG CTTGCCCGAG AACCGTCTCA
TGCGCCGATG TTATCGCGTA CGCTGCCCGT GACGCCATGG AAGTGGCCGG AAGCGTGAAA GTGCCCAACT GGCTCGCTGG ACGAAGGGAC GGGTCGACTT CCATCTCGGC TGAAACTTTG
ACCGAATTAC CCGCTCCTTT CTCCAACTTC ACCACTTTGC AGAGGGCATT CGAGAGGAAG GGTCTCAACC AGGCCGATCT CGTCATTCTC TCAGGTGCCC ACACCGTCGG ATTTGCTAGG
TGCGGTATCA TTCTTCAGCG TCTTTACAAC TTCAAGGGTA CCGGTCAAGC CGACCCCGCT ATCAACCCGA GCTATCTCCA AACCTTGAGG AACCTTTGCC CATCCAACGC ACCCGGTAAG
CAGATCAACA TGGAGATGAT GACTCCCAAC AGGATCGACG CCAACTACTT CAACGATGTT CAAGCAGGAC GTGGTCTTTT CGAGTCCGAC AACGCTCTGA GAACCACTCC CATCGGAAGA
TCCCTCGTCA GCGTTTACAG AGTTCCCCAG GTTTTCAACG CTGCATTCGT CGCCTCCATG AGGAAGATGG GCAACATCGG AGTTCTTACC GGCAGCAGCG GAAAGATCCG CACCCAGTGC
AATATTGCGT AG
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CGGGGGGACC ACTGCCAGGG CAAAGCGTGA GAGAAGCCGC TCGTACAAGC ACTTTACTGT CCATAGTTGT AGAAGGCAAC ACATCTGCCC ACTACCGAAG TCACTTTCGA AACTCAACGA
AACGAAGATT CGAAGAGGAA TCGGAGAGAT AAAACTCCAG TGAGTGCATT ATGGCTAATG CACGTGTTAA AGCCTTTGCT ATCCTATGCA TAGTAGCACT CTGCCTGCAA ATGGCAGATG
CTCAAGGAAG GGGATTAAGA GTTAATTTCT ACCAGAGGTC GTGTCCTCGC GCCGAGCAGA TCATCAGAGG GGTTGTAGAC AGTGCGTTCG CCAGAGATCC TACAATCCCC GCTGGACTCA
TTCGAATGTT CTTTCACGAC TGCTTCGTCA GAGGTTGTGA TGCCTCTGTG CTTCTGGACA ATGCCGATTC CGAGAAGCTG GGTGCTCCCA ACGCCAATTC TCTCCGGGGA TTTGAAGTCT
TGGACGAAGC GAAAGCAGCC CTGGAAGCAG CTTGCCCGAG AACCGTCTCA TGCGCCGATG TTATCGCGTA CGCTGCCCGT GACGCCATGG AAGTGGCCGG AAGCGTGAAA GTGCCCAACT
GGCTCGCTGG ACGAAGGGAC GGGTCGACTT CCATCTCGGC TGAAACTTTG ACCGAATTAC CCGCTCCTTT CTCCAACTTC ACCACTTTGC AGAGGGCATT CGAGAGGAAG GGTCTCAACC
AGGCCGATCT CGTCATTCTC TCAGGTGCCC ACACCGTCGG ATTTGCTAGG TGCGGTATCA TTCTTCAGCG TCTTTACAAC TTCAAGGGTA CCGGTCAAGC CGACCCCGCT ATCAACCCGA
GCTATCTCCA AACCTTGAGG AACCTTTGCC CATCCAACGC ACCCGGTAAG CAGATCAACA TGGAGATGAT GACTCCCAAC AGGATCGACG CCAACTACTT CAACGATGTT CAAGCAGGAC
GTGGTCTTTT CGAGTCCGAC AACGCTCTGA GAACCACTCC CATCGGAAGA TCCCTCGTCA GCGTTTACAG AGTTCCCCAG GTTTTCAACG CTGCATTCGT CGCCTCCATG AGGAAGATGG
GCAACATCGG AGTTCTTACC GGCAGCAGCG GAAAGATCCG CACCCAGTGC AATATTGCGT AGACTCGCAG CATTCCTTCC AAGTTTGAAT GGAACAGTGT GACATTACTT TGTCCTTCGA
CAGCAGTCGA CCTGAAGGTC TTGCCGTTCT CTTCTCTGAA ATATGGTGAG AAGCCTTCGC AGGTAGAAAC GCCCGGGGTT TTCATTTACC GGATTCCAGA GAATTTAATA GGCCTCACGT
GATTACCAAG AACGATGAAG GCATTTTTAA AGTAGATTGT GCTTGTCTAA GTTAGTCGGG ACGGATTTTA GGACCTGAAG ATAAGATCTG CCTCGGGTAC ATTGTAACAT GCCGGAAATT
GAGGATTGCA ATTTGTAACG CCGTCATGTA AATATAAAAT TTGTTCCAAT ATCTGATTTC TCCA
|
Retrieve as FASTA
|
|
