Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
325 (302) |
PWM (Da): |
35199.47 (32866.2) |
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PI (pH): |
4.48 (4.42) |
Peptide Signal: |
cut: 24 range:24-325 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASTSPRSVL FLVLAVAAVV SYAELQLSET FYDATCPQAA SIVQQKVNAF VDADRGLAAA LMRLHFHDCF VRGCDGSVLL NSTDSMLTEK EALLNKGSLR GFEQIDEIKM ELECACPGVV
SCADILALVA RDATAKVGGT SWPVFLGRID GGASFADEVN GSLPERRENF TQLVARFAKV GLDARDMIIL SGGHSIGQVH CGAFFERLYN FQGLNITDPS MDPEFADMLK AQCPQTKPFG
FMALDATNGT FDSTYYLDLL TNKGLLESDV ALLSDPLGVE YAIKAVQDPL AFMNEFGWAM IKMGSIPALE PYGWRRHCAF VEPKY
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Retrieve as FASTA
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Remarks |
Complete sequence from gneomic (3 introns) (contig_13559:90-1596, part of the last exon is missing) and RNA seq (isotig28066). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCAA CCAGTCCGAG ATCGGTCCTC TTTCTTGTGC TAGCGGTAGC AGCAGTTGTT TCTTATGCGG AATTACAGTT GTCAGAAACT TTTTATGATG CCACATGTCC ACAAGCCGCA
TCCATTGTCC AACAGAAGGT GAATGCGTTT GTTGATGCCG ATCGAGGCCT CGCTGCAGCT TTGATGCGAT TACATTTCCA CGATTGCTTC GTCCGGGTAA GAGAGAGCCA GTGTATTGGA
AACGTGATGC ACGTAATGAC CCGTTTGAAA GTGAAGGACA GTTCAATACT TTGAAATGGC GTTTTCTTTT CTGAATGACA GAATATTGAT TGACTTGCAG GGTTGCGATG GGTCCGTCCT
TCTCAATTCT ACAGACTCAA TGTTGACTGA GAAAGAAGCA TTGCTAAACA AAGGTTCCCT GCGAGGATTC GAGCAGATAG ACGAAATCAA GATGGAACTT GAGTGTGCAT GCCCAGGTGT
GGTATCTTGT GCCGATATTT TGGCATTGGT TGCCCGAGAC GCCACTGCTA AGGTATGTAG TTTGATGATT GACATTACCA GGAATCCACT GCTATTGAAA CACAATATAG ATTCCAAGCA
CTTAATTCTC GGTCATTGGT CTATAGGTAA ACAATGTTTG AGTGTTTGGA CAAGATGCAT GAGGCTTGTC CTTACCCGTA CGAACTTGCA CTAGAAGATA TTTATGAAGA ATATGGGACC
ATTTGCAGGT TGGTGGCACT AGCTGGCCCG TATTTTTGGG CCGTATAGAC GGAGGAGCTT CATTCGCGGA TGAGGTCAAT GGTAGTTTAC CTGAACGTAG AGAAAACTTC ACTCAACTCG
TTGCCAGGTT CGCCAAAGTT GGACTAGATG CCAGAGACAT GATTATACTA TCAGGTAACG TGAGGTGATG AAAATGATTT GTCCCATGAT CCTTTAACTA CAAAGTACTA GATTGTTCAT
GTAATGTTGG ATTTGGGGCC CTGCACGCAG AAAACTCGAG GTCCAAGTGA GTAAAATTCA CGACGGCTCC GATTTGGACT TTGTCACAGC AAATATATTC ACAGATTCTG AAGAAAAAAA
TCAAAAGCGA TCCACTCTGA GACACTGAAT GTCTCTCACA TATGAAATTC ATTGCACGGG TCGCAACACA GACATATAAT CTTCATATTC ATTCTGTTTT CCTCACTACA TTCACTCTAA
TGCAGGTGGA CACTCTATTG GACAAGTTCA CTGTGGCGCA TTTTTCGAGC GTCTCTACAA CTTCCAGGGA CTGAACATCA CAGATCCATC CATGGACCCT GAGTTCGCTG ATATGCTCAA
GGCTCAGTGC CCTCAGACCA AACCTTTCGG TTTCATGGCT TTGGACGCCA CCAATGGCAC CTTCGACTCT ACATACTACT TGGATCTGTT GACGAACAAG GGACTGCTGG AGTCGGACGT
GGCGCTCTTG AGCGATCCTC TGGGTGTGGA ATATGCTATC AAAGCAGTGC AAGATCCCTT GGCTTTCATG AACGAGTTCG GATGGGCGAT GATCAAAATG GGCTCCATTC CTGCGCTTGA
GCCGTACGGC TGGAGAAGAC ACTGCGCTTT TGTTGAACCC AAATATTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCAA CCAGTCCGAG ATCGGTCCTC TTTCTTGTGC TAGCGGTAGC AGCAGTTGTT TCTTATGCGG AATTACAGTT GTCAGAAACT TTTTATGATG CCACATGTCC ACAAGCCGCA
TCCATTGTCC AACAGAAGGT GAATGCGTTT GTTGATGCCG ATCGAGGCCT CGCTGCAGCT TTGATGCGAT TACATTTCCA CGATTGCTTC GTCCGGGGTT GCGATGGGTC CGTCCTTCTC
AATTCTACAG ACTCAATGTT GACTGAGAAA GAAGCATTGC TAAACAAAGG TTCCCTGCGA GGATTCGAGC AGATAGACGA AATCAAGATG GAACTTGAGT GTGCATGCCC AGGTGTGGTA
TCTTGTGCCG ATATTTTGGC ATTGGTTGCC CGAGACGCCA CTGCTAAGGT TGGTGGCACT AGCTGGCCCG TATTTTTGGG CCGTATAGAC GGAGGAGCTT CATTCGCGGA TGAGGTCAAT
GGTAGTTTAC CTGAACGCAG AGAAAACTTC ACTCAACTCG TTGCCAGGTT CGCCAAAGTT GGACTAGATG CCAGAGACAT GATTATACTA TCAGGTGGAC ACTCTATTGG ACAAGTTCAC
TGTGGCGCAT TTTTCGAGCG TCTCTACAAC TTCCAGGGAC TGAACATCAC AGATCCATCC ATGGACCCTG AGTTCGCTGA TATGCTCAAG GCTCAGTGCC CTCAGACCAA ACCTTTCGGT
TTCATGGCTT TGGACGCCAC CAATGGCACC TTCGACTCTA CATACTACTT GGATCTGTTG ACGAACAAGG GACTGCTGGA GTCGGACGTG GCGCTCTTGA GCGATCCTCT GGGTGTGGAA
TATGCTATCA AAGCAGTGCA AGATCCCTTG GCTTTCATGA ACGAGTTCGG ATGGGCGATG ATCAAAATGG GCTCCATTCC TGCGCTTGAG CCGTACGGCT GGAGAAGACA CTGCGCTTTT
GTTGAACCCA AATATTAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AAGTTGACAA GCTCCTTCTG ATCTTTGACC TCAATCCAGC TCGAAGGTGA GTCTGATCAG CTTGCGTGGT CGGACTGGCT TCGACTGGGT ACGAGGTCAA GATCGTCCAC TTGTTAAAAG
GGCCCGGACT CTCTGGGGGA AGTTTCGTCG GCATCATTCT AGCTACAATG GCTTCAACCA GTCCGAGATC GGTCCTCTTT CTTGTGCTAG CGGTAGCAGC AGTTGTTTCT TATGCGGAAT
TACAGTTGTC AGAAACTTTT TATGATGCCA CATGTCCACA AGCCGCATCC ATTGTCCAAC AGAAGGTGAA TGCGTTTGTT GATGCCGATC GAGGCCTCGC TGCAGCTTTG ATGCGATTAC
ATTTCCACGA TTGCTTCGTC CGGGGTTGCG ATGGGTCCGT CCTTCTCAAT TCTACAGACT CAATGTTGAC TGAGAAAGAA GCATTGCTAA ACAAAGGTTC CCTGCGAGGA TTCGAGCAGA
TAGACGAAAT CAAGATGGAA CTTGAGTGTG CATGCCCAGG TGTGGTATCT TGTGCCGATA TTTTGGCATT GGTTGCCCGA GACGCCACTG CTAAGGTTGG TGGCACTAGC TGGCCCGTAT
TTTTGGGCCG TATAGACGGA GGAGCTTCAT TCGCGGATGA GGTCAATGGT AGTTTACCTG AACGCAGAGA AAACTTCACT CAACTCGTTG CCAGGTTCGC CAAAGTTGGA CTAGATGCCA
GAGACATGAT TATACTATCA GGTGGACACT CTATTGGACA AGTTCACTGT GGCGCATTTT TCGAGCGTCT CTACAACTTC CAGGGACTGA ACATCACAGA TCCATCCATG GACCCTGAGT
TCGCTGATAT GCTCAAGGCT CAGTGCCCTC AGACCAAACC TTTCGGTTTC ATGGCTTTGG ACGCCACCAA TGGCACCTTC GACTCTACAT ACTACTTGGA TCTGTTGACG AACAAGGGAC
TGCTGGAGTC GGACGTGGCG CTCTTGAGCG ATCCTCTGGG TGTGGAATAT GCTATCAAAG CAGTGCAAGA TCCCTTGGCT TTCATGAACG AGTTCGGATG GGCGATGATC AAAATGGGCT
CCATTCCTGC GCTTGAGCCG TACGGCTGGA GAAGACACTG CGCTTTTGTT GAACCCAAAT ATTAGACGAG GGATGCATTT TTAGGAGATT TTCCATTTGC TGTAAGTAAG GCAGTCGGAT
CTCACTCAGG ACAGCCTTCA ATAAGATGCT TGTTTCTTCC AGGACAGTGA CGATTGTAGA ATCAAGTAGA TTAGTCAAGA ACACTGCGAA TCTATGGTTC ACCTTGGCTC ATGTTCCTAT
GTCATATTTG CAACTATAGG GTCACATAGC ACTAATGGTG GGTGGGTGTA GATACAATTG AAATTAGATG AATCTCATTC TTTGAATGAT CCCGAGGCCA AGCTTGTAAC TACTCCTTCC
TGTGTAATAA ATCCAATACC ATTGATTCCA AAGGCATGAC CTTGTATTGC AGTTTAGAAC TACGCCAGTT GTAGGAAAGC TAAATTCATT CATAAATATC AACCGAAAAA CCTTGATCAA
CTGAAGTCAA GATGTAGATG TTTAGAGTAA TGGAGGTAGG AGTGTCAGTC AGCTGTATCG AAAGAAAGGA AGGACATGAT GTATAATCAG ATTTCTGGCT TGTACTTTGC ATGATCAGCA
GATACATTAT AAAATCTGTT GAACAGAAAA AAA
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Retrieve as FASTA
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