Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
339 (314) |
| PWM (Da): |
36243.34 (33376.8) |
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| PI (pH): |
7.6 (6.25) |
Peptide Signal: |
cut: 26 range:26-339 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MKLSRRDCAV LSVLLGLWLC TLARATSVGD ISPQWVKGSL SIKFYEQTCP QLDGIVKAAV TQALNADLSL AGSLVRMAFH DCFVRGCDAS LLLDSTPAQQ AEKTAGPNQN SLRGFNVYDA
IKNAVETVCP GVVSCADIIA LVARDSVVAT GGPTWPIYLG RRDGTVSSQQ EANSQIPSAT LGYSQLMAAF ANVGLSQHDL VTLSGAHTLG RAQCFLFSNR LYNFTGQGDT DPTINAAFAA
QLKAACPPNP PTASFVPLDS TQNKFDRNYY TDVLAGRGVF QSDAALLTAR YPLSIITAIS QDPTNFFKDF PVSMNRMLAI GVLTDTQGEI RKKCNVVNP*
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (3 introns, contig_8805:10095-11899) and RNA seq (isotig22532 and isotig22533). |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAGCTCT CCCGCAGGGA CTGTGCAGTC CTGTCGGTTC TTCTGGGACT GTGGTTGTGC ACTCTGGCTC GAGCAACTTC CGTAGGGGAC ATATCTCCAC AATGGGTCAA AGGTTCATTA
TCTATCAAAT TCTACGAGCA GACTTGCCCG CAGTTAGATG GCATCGTCAA AGCTGCAGTG ACTCAAGCCT TGAACGCCGA CCTCAGCCTC GCGGGTTCTC TCGTTCGAAT GGCATTCCAC
GACTGCTTCG TGCGGGTACA GCATCATGCC TATTCCCTGC CTGCCTGCCT GCCTGCCTGC CTGCAAAACC TGGACGATTC CAGAAACGTT GCATATGCAG CTCACATTCG GATCAATTTG
GCTCGTTGAG ACGGACCGGG TCTGATCTTG CTCCGATCGT CCGAGGAAGG AGATGGAAGC AATTGCAGTG ATTGCTGTCA TCCACCAGCT CCTCCTGCTC TGCTGCTCGA GCGAGTGAAC
GTACTTCTTC CGACCAGTAT GCGATGCATG GAATGGAATG GAATGTCTGG CGACTGACTT CTCCGCTTGT GCTGCCTGTC TGTCTGTCTG TCTGTCTCAG GGATGTGACG CTTCGTTGCT
GCTGGACTCC ACGCCCGCGC AGCAAGCGGA GAAAACGGCG GGACCGAATC AGAACTCCCT CAGGGGATTC AACGTTTACG ACGCGATCAA GAACGCGGTG GAGACCGTGT GCCCCGGCGT
GGTGTCGTGC GCCGATATCA TCGCTCTCGT GGCTCGAGAT TCCGTCGTCG CGGTGCGAAT CTCTCTCTCC GACAGATTTG TTGATCTGGC TAGAAAACAG GCAGTGCACG GAGGATTATG
CGAGGGAGGG AAGGGAATGC CGTGATCTGC TGTGTAATCA TGATGTTCCT GTGCTTTGCT TCCTCCAGAC AGGAGGCCCG ACTTGGCCCA TCTATCTGGG CCGGAGGGAT GGCACCGTCT
CGTCGCAGCA AGAGGCCAAC AGCCAGATAC CGTCCGCGAC ATTAGGCTAC TCTCAGCTCA TGGCCGCTTT CGCCAATGTG GGCCTCTCTC AGCATGATCT CGTCACCCTC TCAGGTACTG
GAAAATGTCC AATCTCCATT TTTCCCTTTC TCTTTTTCCT GTCCAGATTC GGTTCTGTTC TGTTCTGTTC TGTTCTCGTC CAATTACCAC CAGAGCACCA AATTCTCCCC GTAAGATTCT
CACCCGGACA CAGATTAGGT CATTTAGTAC GCCCATGAGT AGACTCATTT CTCATTCCCT GTTTGTCATG GGCAAACGAT TATTCGAATT CCAGAGCAGA ATTTTCCTCT CCTCTTCCGA
TCCTCAGCAT TCCTCTCCTC GGTCGATTGG CTGGAATGAA TGTGCTGGGC TGTTGAGATG GATCGGTTGG CGATGCAGGT GCTCACACTC TGGGGAGGGC TCAGTGTTTC TTGTTCAGCA
ATCGATTGTA CAATTTCACG GGGCAAGGGG ACACGGACCC GACCATCAAC GCTGCGTTCG CCGCGCAGCT CAAGGCAGCG TGCCCGCCCA ATCCTCCCAC CGCTTCCTTC GTTCCGCTGG
ACAGCACGCA GAACAAGTTC GACCGAAATT ATTACACGGA CGTTCTGGCC GGACGAGGCG TGTTCCAGTC GGACGCCGCC CTTCTGACTG CGCGCTACCC ATTGTCGATC ATCACCGCCA
TCTCGCAGGA CCCCACCAAC TTCTTTAAGG ATTTTCCCGT GTCCATGAAC AGAATGCTCG CCATCGGCGT TCTGACGGAC ACGCAGGGCG AAATTCGCAA GAAATGCAAT GTTGTGAACC
CTTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAGCTCT CCCGCAGGGA CTGTGCAGTC CTGTCGGTTC TTCTGGGACT GTGGTTGTGC ACTCTGGCTC GAGCAACTTC CGTAGGGGAC ATATCTCCAC AATGGGTCAA AGGTTCATTA
TCTATCAAAT TCTACGAGCA GACTTGCCCG CAGTTAGATG GCATCGTCAA AGCTGCAGTG ACTCAAGCCT TGAACGCCGA CCTCAGCCTC GCGGGTTCTC TCGTTCGAAT GGCATTCCAC
GACTGCTTCG TGCGGGGATG TGACGCTTCG TTGCTGCTGG ACTCCACGCC CGCGCAGCAA GCGGAGAAAA CGGCGGGACC GAATCAGAAC TCCCTCAGGG GATTCAACGT TTACGACGCG
ATCAAGAACG CGGTGGAGAC CGTGTGCCCC GGCGTGGTGT CGTGCGCCGA TATCATCGCT CTCGTGGCTC GAGATTCCGT CGTCGCGACA GGAGGCCCGA CTTGGCCCAT CTATCTGGGC
CGGAGGGATG GCACCGTCTC GTCGCAGCAA GAGGCCAACA GCCAGATACC GTCCGCGACA TTAGGCTACT CTCAGCTCAT GGCCGCTTTC GCCAATGTGG GCCTCTCTCA GCATGATCTC
GTCACCCTCT CAGGTGCTCA CACTCTGGGG AGGGCTCAGT GTTTCTTGTT CAGCAATCGA TTGTACAATT TCACGGGGCA AGGGGACACG GACCCGACCA TCAACGCTGC GTTCGCCGCG
CAGCTCAAGG CAGCGTGCCC GCCCAATCCT CCCACCGCTT CCTTCGTTCC GCTGGACAGC ACGCAGAACA AGTTCGACCG AAATTATTAC ACGGACGTTC TGGCCGGACG AGGCGTGTTC
CAGTCGGACG CCGCCCTTCT GACTGCGCGC TACCCATTGT CGATCATCAC CGCCATCTCG CAGGACCCCA CCAACTTCTT TAAGGATTTT CCCGTGTCCA TGAACAGAAT GCTCGCCATC
GGCGTTCTGA CGGACACGCA GGGCGAAATT CGCAAGAAAT GCAATGTTGT GAACCCTTAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATCGTCGTCT GGGGCTTCGT GTGGCGCGTA CCAAAAGCAC GTGTAGCGGT AGTAGAGTAG AAGAGATCTT TCCTAGCTGG CGCGGGTGAA GGGCAAAGGG CCAAGAGCCA AGGGCAACAA
AGCAGAGCGA GAGGATCGGT GCGGAGCGGA GGCTAGCGGA GTCGAAAAAT CGAGGCCCGT TGGAGGTCGG ATGGATGGCT GAAACTCGAA AGCGCAATAC GATATTTAAG TGGCCCGTGA
GTGATGAAGC TCTCCCGCAG GGACTGTGCA GTCCTGTCGG TTCTTCTGGG ACTGTGGTTG TGCACTCTGG CTCGAGCAAC TTCCGTAGGG GACATATCTC CACAATGGGT CAAAGGTTCA
TTATCTATCA AATTCTACGA GCAGACTTGC CCGCAGTTAG ATGGCATCGT CAAAGCTGCA GTGACTCAAG CCTTGAACGC CGACCTCAGC CTCGCGGGTT CTCTCGTTCG AATGGCATTC
CACGACTGCT TCGTGCGGGG ATGTGACGCT TCGTTGCTGC TGGACTCCAC GCCCGCGCAG CAAGCGGAGA AAACGGCGGG ACCGAATCAG AACTCCCTCA GGGGATTCAA CGTTTACGAC
GCGATCAAGA ACGCGGTGGA GACCGTGTGC CCCGGCGTGG TGTCGTGCGC CGATATCATC GCTCTCGTGG CTCGAGATTC CGTCGTCGCG ACAGGAGGCC CGACTTGGCC CATCTATCTG
GGCCGGAGGG ATGGCACCGT CTCGTCGCAG CAAGAGGCCA ACAGCCAGAT ACCGTCCGCG ACATTAGGCT ACTCTCAGCT CATGGCCGCT TTCGCCAATG TGGGCCTCTC TCAGCATGAT
CTCGTCACCC TCTCAGGTGC TCACACTCTG GGGAGGGCTC AGTGTTTCTT GTTCAGCAAT CGATTGTACA ATTTCACGGG GCAAGGGGAC ACGGACCCGA CCATCAACGC TGCGTTCGCC
GCGCAGCTCA AGGCAGCGTG CCCGCCCAAT CCTCCCACCG CTTCCTTCGT TCCGCTGGAC AGCACGCAGA ACAAGTTCGA CCGAAATTAT TACACGGACG TTCTGGCCGG ACGAGGCGTG
TTCCAGTCGG ACGCCGCCCT TCTGACTGCG CGCTACCCAT TGTCGATCAT CACCGCCATC TCGCAGGACC CCACCAACTT CTTTAAGGAT TTTCCCGTGT CCATGAACAG AATGCTCGCC
ATCGGCGTTC TGACGGACAC GCAGGGCGAA ATTCGCAAGA AATGCAATGT TGTGAACCCT TAGAAATCCA TTGCCCCGAC TAGAATCAAT TATCAATCAG ATAGATAGGT AGGTAGATGA
AACTTGTATA ACCTGCATAT ATTCGGTCCT ACGCTCAATA CAGTTAATAT ATGTGTTCCT TCCTTCATTC GACTCATGCC GGTTGAGCGA GTGGATCACC CGCGCTGTAA AACTTCTTCA
TGTAATAAGC TGCTGCTGCC GCCCTGGCAA CCGAGTTGTG CAAA
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Retrieve as FASTA
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