Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
325 (301) |
PWM (Da): |
34801.66 (32386.4) |
Transmb domain: |
i5-27o |
PI (pH): |
8.74 (8.57) |
Peptide Signal: |
cut: 25 range:25-325 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAQSGFKWAL FVVVAILGVA AANAQLSTSF YATKCPGAVA KAAEVVKTWI LKDRSMAPAL LRLHFHDCFV RGCDASVLLD STIANSGEKD ADGNKNSLRG FEIIDDVKAK IEALCPGVVS
CADILALAAR DAMLVFGGLN YTVPLGRRDG VSSFAWEANN NLPPPFADWT KLMSIFSTKG LTSKDMVVLS GAHTVGFTRC STIQTRLYNF SSTAATDPAI DPAFVPTLKS RCKFGSTGII
MMDLSKSTDT WDFNYYSNVL RGRALFQSDD ALKRTSEGLQ LVQAENRAGG PFSADFAASM VKMGNIQILT GTSGQIRKNC RVVNK
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (3 introns, contig_16967:31696-33381) and RNA seq (isotig32091) |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCACAAT CAGGCTTCAA ATGGGCCCTC TTCGTTGTTG TAGCAATTCT TGGTGTTGCT GCAGCTAATG CTCAGCTTTC AACGAGCTTC TACGCAACTA AGTGCCCAGG TGCCGTTGCT
AAGGCAGCTG AAGTGGTTAA AACGTGGATT TTGAAGGACA GGAGTATGGC ACCTGCTCTT CTTCGCCTGC ATTTCCACGA TTGTTTTGTC AGGGTGAGTA TTCTAGTCCC AATCAGAAGA
AAACTCAGCA ATTTTCCAAT GTTCATAAGT TTGTAGGATG AAAATAGTCT GAGACTCTCA TTCTAACAGG TCAGATTGTG TTATACGTAG ACATTCTACA AGGCCTTCAT TTTCTCAAGC
AATATCAAAA CAATGTTCAC TATTATAATA GCTGCAGAGG TCCCAAAGCC TGGCTGAAAC AAAGTTTCAT ACAACTCGTC AGTCAAATGT CATCATTTTG TTCTTAAATA CCATTATTTT
CACTGTTATA TCTGATCTTC AGGGCTGCGA TGCATCGGTG CTGTTGGATT CGACCATAGC TAACAGTGGA GAGAAGGACG CTGACGGTAA CAAGAATTCT CTCAGAGGCT TTGAGATTAT
TGACGACGTC AAGGCCAAAA TTGAGGCTTT GTGCCCAGGC GTTGTCTCTT GCGCCGACAT CCTCGCTCTT GCTGCCCGAG ACGCCATGCT TGTGGTGAGA AAGCAAGCAG AATAGAAGCC
GGCAGTTCAT CATTTGCTTA GTCCTAATAC CTGCATTGCG AGTTAGAGAT TACTGGACTA CTTCATGTTC TCCTCTTTTC AGTCTCGAGT TTTCATTAAT TGGTATCACC ACTTCAACGA
CGTATGTACT CTCTATACTT TGACACTGAG ACTAGTCTCG TTGCTATGAA TTTTTGTGCA GTTCGGAGGA CTCAACTATA CCGTTCCTTT GGGCCGAAGA GATGGTGTAA GCTCATTCGC
ATGGGAAGCG AACAACAACT TGCCTCCTCC TTTCGCCGAT TGGACCAAAC TAATGAGCAT ATTCTCTACA AAGGGTCTTA CCAGCAAGGA TATGGTTGTT CTCTCAGGTG AAAATTCTGT
TTTGTGTAAA GGTTCGATTC GAAAACTTGG AATGAATCAG GTGCCGGCAA ACAGTCGAAG CTCATTCAGT AATAGTACCT CACTGAATGA GATTCGTCCT TGTTAAGGCA ACCTTAGAGA
GTTGACTGAT CCAAGCAGTG GAGAAAATGG ATAACCATCT TTTCAGCAGA CCTAACAAGT TGTGCAATGT GAAATGCAGG TGCCCATACC GTTGGCTTTA CCCGCTGCTC GACCATTCAG
ACAAGACTCT ACAACTTCTC TTCTACTGCC GCCACCGACC CAGCAATCGA CCCAGCGTTC GTTCCTACTT TGAAGAGCAG GTGCAAGTTT GGATCTACCG GCATCATCAT GATGGATCTA
TCCAAGTCCA CCGACACCTG GGACTTCAAC TACTACTCAA ATGTCTTGAG AGGAAGAGCT CTCTTCCAGT CTGACGATGC TCTCAAGAGA ACTTCCGAGG GTTTGCAGCT AGTTCAGGCA
GAGAACAGGG CAGGAGGGCC ATTCTCAGCA GACTTTGCCG CTTCAATGGT CAAGATGGGA AACATCCAGA TACTCACTGG TACCAGCGGA CAAATTCGCA AGAACTGTCG CGTTGTGAAC
AAGTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCACAAT CAGGCTTCAA ATGGGCCCTC TTCGTTGTTG TAGCAATTCT TGGTGTTGCT GCAGCTAATG CTCAGCTTTC AACGAGCTTC TACGCAACTA AGTGCCCAGG TGCCGTTGCT
AAGGCAGCTG AAGTGGTTAA AACGTGGATT TTGAAGGACA GGAGTATGGC ACCTGCTCTT CTTCGCCTGC ATTTCCACGA TTGTTTTGTC AGGGGCTGCG ATGCATCGGT GCTGTTGGAT
TCGACCATAG CTAACAGTGG AGAGAAGGAC GCTGACGGTA ACAAGAATTC TCTCAGAGGC TTTGAGATTA TTGACGACGT CAAGGCCAAA ATTGAGGCTT TGTGCCCAGG CGTTGTCTCT
TGCGCCGACA TCCTCGCTCT TGCTGCCCGA GACGCCATGC TTGTGTTCGG AGGACTCAAC TATACCGTTC CTTTGGGCCG AAGAGATGGT GTAAGCTCAT TCGCATGGGA AGCGAACAAC
AACTTGCCTC CTCCTTTCGC CGATTGGACC AAACTAATGA GCATATTCTC TACAAAGGGT CTTACCAGCA AGGATATGGT TGTTCTCTCA GGTGCCCATA CCGTTGGCTT TACCCGCTGC
TCGACCATTC AGACAAGACT CTACAACTTC TCTTCTACTG CCGCCACCGA CCCAGCAATC GACCCAGCGT TCGTTCCTAC TTTGAAGAGC AGGTGCAAGT TTGGATCTAC CGGCATCATC
ATGATGGATC TATCCAAGTC CACCGACACC TGGGACTTCA ACTACTACTC AAATGTCTTG AGAGGAAGAG CTCTCTTCCA GTCTGACGAT GCTCTCAAGA GAACTTCCGA GGGTTTGCAG
CTAGTTCAGG CAGAGAACAG GGCAGGAGGG CCATTCTCAG CAGACTTTGC CGCTTCAATG GTCAAGATGG GAAACATCCA GATACTCACT GGTACCAGCG GACAAATTCG CAAGAACTGT
CGCGTTGTGA ACAAGTAG
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Retrieve as FASTA
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