Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
377 (356) |
PWM (Da): |
41608.72 (39278.5) |
Transmb domain: |
i5-22o |
PI (pH): |
5.76 (5.29) |
Peptide Signal: |
cut: 22 range:22-377 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MRSQLVLTCL VFLCLVLGGV AWDDAKNEDY SRKSTWGARN DEDVPRNEEN GERNAWGLSN AWDALKNVWG PRNSNVPRKN YYQSTHCPNV EQLIRDITWS KVAQDPTLGA KLLRIHYHDC
FVKGCDASIL LDKVGSDDSE KEARPNLSLA GFEVIDDIKR EVESKCPGIV SCADILALVA RDAVSYPFKT SMWEVETGRK DGFVSLASNV NGNLPSPFSD FATLKQIFAN KGLNVDDLVA
LSGAHTIGVA HCGAFSRRLF NFSGKGDMDP SLNATYAKDL KDVCPNPANP ATIVEMDPMS STSFDSNYFN ILINQNKGLF QSDAALLNDK DSVIVIKKLQ DDNTFFSEFA KSMKKMGAIE
LLTGNAGEIR KNCRVKN*
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Retrieve as FASTA
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Remarks |
very long PS and divergeant from Solanum tuberosum ortholg, confirmed with EST |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGAAGTC AATTAGTACT AACTTGTCTT GTTTTTCTAT GTCTTGTTCT TGGTGGAGTT GCTTGGGATG ATGCAAAGAA TGAAGACTAT TCAAGAAAGA GTACTTGGGG TGCAAGGAAC
GACGAAGACG TTCCAAGGAA TGAAGAAAAT GGTGAAAGGA ATGCTTGGGG TTTAAGCAAT GCTTGGGATG CACTTAAGAA TGTTTGGGGT CCAAGGAACT CAAATGTACC ACGAAAGAAC
TACTATCAAA GCACTCATTG TCCAAATGTT GAACAACTTA TTAGAGATAT CACTTGGAGC AAAGTTGCAC AAGACCCTAC CTTGGGTGCC AAATTGCTTC GAATCCACTA CCATGATTGT
TTCGTTAAGG TATGTAGTTA TTAGAATTAC TATACCATGC ACATGTTATT TCGTAATAGG ATTTAAGTTA TGTACACTGA CATGATAGTT ACGTTAATTT ATGTCCTGAC GTTATGCAAA
TTTATAAATA GGGGTGTGAT GCATCCATAT TGCTAGACAA AGTTGGTTCA GATGATTCAG AGAAGGAGGC TAGGCCAAAT CTCTCTTTGG CTGGTTTCGA AGTAATTGAT GATATCAAGC
GAGAAGTTGA GTCTAAATGC CCTGGCATTG TTTCTTGTGC TGACATTTTA GCTTTAGTTG CTCGTGATGC TGTTTCTTAT CCTGTAAGTA ATTACATCTC CATATGTTCA AAGGGCAGTC
TTTTCATAGA TATTTTTATT AAGAAAATCC ACTTAGTATA TATATATAAA TAATTACTCT TTTGCATGCA GTTTAAAACT TCAATGTGGG AAGTGGAGAC TGGAAGAAAA GATGGATTTG
TTTCCCTTGC AAGTAATGTG AATGGAAACT TACCTTCACC ATTCTCAGAT TTTGCAACCC TTAAGCAAAT CTTTGCAAAC AAAGGCCTAA ATGTCGATGA TCTCGTTGCA TTATCAGGTA
AATATTATAT GCCTATACTG TTAGTGTATA CACGTTAAAT CCATGAGTAA TACTAATATA TTTCATGTAT TATATATGGA TAGGTGCTCA CACAATTGGT GTTGCTCATT GTGGAGCATT
TTCAAGGAGA CTTTTCAATT TCAGTGGCAA AGGTGACATG GATCCATCTC TCAATGCTAC ATATGCTAAA GACTTGAAGG ATGTATGCCC AAATCCAGCC AATCCAGCTA CCATTGTTGA
AATGGACCCT ATGAGTTCAA CTTCATTTGA TAGCAATTAT TTCAACATTC TTATTAATCA AAACAAAGGG TTGTTCCAAT CTGATGCTGC ACTTCTCAAT GACAAAGACT CAGTAATTGT
CATCAAGAAA TTGCAAGATG ATAACACTTT CTTTTCCGAG TTTGCGAAAT CCATGAAGAA AATGGGAGCC ATTGAACTTC TTACTGGAAA TGCTGGAGAA ATCAGGAAGA ATTGTCGCGT
CAAAAACTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGAAGTC AATTAGTACT AACTTGTCTT GTTTTTCTAT GTCTTGTTCT TGGTGGAGTT GCTTGGGATG ATGCAAAGAA TGAAGACTAT TCAAGAAAGA GTACTTGGGG TGCAAGGAAC
GACGAAGACG TTCCAAGGAA TGAAGAAAAT GGTGAAAGGA ATGCTTGGGG TTTAAGCAAT GCTTGGGATG CACTTAAGAA TGTTTGGGGT CCAAGGAACT CAAATGTACC ACGAAAGAAC
TACTATCAAA GCACTCATTG TCCAAATGTT GAACAACTTA TTAGAGATAT CACTTGGAGC AAAGTTGCAC AAGACCCTAC CTTGGGTGCC AAATTGCTTC GAATCCACTA CCATGATTGT
TTCGTTAAGG GGTGTGATGC ATCCATATTG CTAGACAAAG TTGGTTCAGA TGATTCAGAG AAGGAGGCTA GGCCAAATCT CTCTTTGGCT GGTTTCGAAG TAATTGATGA TATCAAGCGA
GAAGTTGAGT CTAAATGCCC TGGCATTGTT TCTTGTGCTG ACATTTTAGC TTTAGTTGCT CGTGATGCTG TTTCTTATCC TTTTAAAACT TCAATGTGGG AAGTGGAGAC TGGAAGAAAA
GATGGATTTG TTTCCCTTGC AAGTAATGTG AATGGAAACT TACCTTCACC ATTCTCAGAT TTTGCAACCC TTAAGCAAAT CTTTGCAAAC AAAGGCCTAA ATGTCGATGA TCTCGTTGCA
TTATCAGGTG CTCACACAAT TGGTGTTGCT CATTGTGGAG CATTTTCAAG GAGACTTTTC AATTTCAGTG GCAAAGGTGA CATGGATCCA TCTCTCAATG CTACATATGC TAAAGACTTG
AAGGATGTAT GCCCAAATCC AGCCAATCCA GCTACCATTG TTGAAATGGA CCCTATGAGT TCAACTTCAT TTGATAGCAA TTATTTCAAC ATTCTTATTA ATCAAAACAA AGGGTTGTTC
CAATCTGATG CTGCACTTCT CAATGACAAA GACTCAGTAA TTGTCATCAA GAAATTGCAA GATGATAACA CTTTCTTTTC CGAGTTTGCG AAATCCATGA AGAAAATGGG AGCCATTGAA
CTTCTTACTG GAAATGCTGG AGAAATCAGG AAGAATTGTC GCGTCAAAAA CTAA
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Retrieve as FASTA
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