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Entry information : LePrx[P]104(Solyc12g017660.1.1 [2.3])
Entry ID 15856
Creation 2019-04-19 (Christophe Dunand)
Last sequence changes 2019-04-19 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2023-01-17 (Christophe Dunand)
Peroxidase information: LePrx[P]104(Solyc12g017660.1.1 [2.3])
Name LePrx[P]104(Solyc12g017660.1.1 [2.3])
Class Class III peroxidase     [Orthogroup: Prx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LePrx[P]104
start..stop		 S start..stop
LePrx24 353 1.57e-123 1..247 76..330
StPrx10 349 6.19e-122 1..247 76..330
LePrx70 343 9.55e-120 1..247 76..330
NtPrx35-1A 332 3.86e-115 1..247 76..330
Literature and cross-references LePrx[P]104(Solyc12g017660.1.1 [2.3])
Protein sequence: LePrx[P]104(Solyc12g017660.1.1 [2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   244
PWM (Da):   %s   26409.66 Transmb domain:   %s   i30-52o67-89i110-129o156-178i190-212o
PI (pH):   %s   10.21
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GYDATLLLVS SNGIVAKKGL NPKKYSARGF EVLDEIKSAL DKECPRNVFR ADIFALAARD AIVLVGRPNW EVILGRRDSR SANLSGSNNN IPAPNNTNDK FxxxxxxRSH TIKNSRCTRF  RQGLYN*SGN NxxNSTLDES YAAQWQIWW* PKSGGDQNLF FLDFVSPKKY DNNYFKFLLA *KGLLKFDQV LTTKSKESLA LVNQYAENNA LFFDHFAKFI VKMGNISPLT DPVGSSGEIR 
KTCRKIN 

Retrieve as FASTA  
Remarks Pseudogene from genomic. First exon and end of exon 3 are missing. Several stop in frame and frame shift. Incorrect prediction from Phytozome.