1. Browse the Database
  2. View Redoxidase
Entry information : SaPrx[P]47
Entry ID 16014
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2019-12-04 (Christophe Dunand)
Peroxidase information: SaPrx[P]47
Name SaPrx[P]47
Class Class III peroxidase     [Orthogroup: Prx029]*
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx[P]47
start..stop		 S start..stop
HaPrx08 282 1.06e-96 5..194 137..326
CclPrx43 281 3.94e-96 5..194 135..324
VvPrx65 280 5.41e-96 5..194 133..322
CsPrx20 280 1.59e-95 5..194 137..326
Literature and cross-references SaPrx[P]47
Protein ref. GenBank:   GER47501.1 [Incorrect prediction]
Protein sequence: SaPrx[P]47
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   194 (302)
PWM (Da):   %s   20827.33 (32509.3)  
PI (pH):   %s   8.82 (8.21) Peptide Signal:   %s   cut: 23 range:23-324
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
xxxxAGGPKF QVELGRRDGL ISKASMVSGN LPGPNFNLDQ LKTMFAKNNL SQIDMIALSG SHTLGFSHCS RFTKRLYSFS NGRQVDPTLN PVYAQDLMKS CPNNISDDNI VFMDPVTPQK 
FDNAYYQNLV EGKGLFTSDQ VLYTDLSSRS TVKDFASNSG QFITEFATAM RRLGRVGVKT GEQGEIRKDC AAFN 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Exons 1 and 2 are missing (scaffold border => low quality?)