1. Browse the Database
  2. View Redoxidase
Entry information : SaPrx[P]58
Entry ID 16026
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2019-12-10 (Christophe Dunand)
Peroxidase information: SaPrx[P]58
Name SaPrx[P]58
Class Class III peroxidase    [Orthogroup: Prx234]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx[P]58
start..stop		 S start..stop
SaPrx07 493 2e-177 1..327 5..331
SaPrx58 409 4.64e-144 1..327 5..336
CcampPrx70 384 2.99e-134 13..327 25..342
MguPrx17 383 6.66e-134 7..327 11..335
Literature and cross-references SaPrx[P]58
Protein ref. GenBank:   GER57128.1 [Incorrect prediction]
Protein sequence: SaPrx[P]58
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (366)
PWM (Da):   %s   34932.64 (37627.3) Transmb domain:   %s   i2-24o
PI (pH):   %s   8 (4.03) Peptide Signal:   %s   cut: 19 range:19-384
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
SSFFPIVIAT ATFFILAMIF EAQLSTIFYS SSCSNVSNIV SDQISHALAN DPRIGASLIR LHFHDCFVQx xDGSVLLDDN TMNFIQSEKS AGPNVNSARG FDVVDNIKSA LEQSCPGVVS  CAHILALASQ AAVFLVGGLS WTVPCGRKDI KTANRALANV AILSPFEIIP NITNKFVTVG LNMNNLVALA GAHTFGRARC SVFLARLYNF NGTGHADPTL NRSYLARLRR VCPQNGANLS 
LVVTNLDQSS PNAFDNGYYK NLVTGQGLLQ SDQELFSNSW PQISGVVQQF SRNQNAFFKS FVASMVEMGN IGSGQGGEIR ANCRIIN 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic. No start in frame in the exon 1 or sequence without PS, extra intron in exon 2 without splicing site. Uncorrect prediction: GER57128.1 contains two ORF