Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
330 (311) |
| PWM (Da): |
34682.08 (32674.0) |
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| PI (pH): |
4.31 (4.31) |
Peptide Signal: |
cut: 20 range:20-330 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MVFTTLLAFV GVTASVAQAA SLKPRVTCPN GQNAQNTVCC DFFALRDDLQ AHLFDNQCGE TVHEVLRLSF HDAIAFSKAQ GPSAGGGADG SMLIFPNVEP NFFANLGISD GVGDLLPFLQ
NHSTITAGDL IQFAAAVGIT NCPGAPQLEF LAGRPNATAP AIDGLIPEPQ DSVDSILARM ADGGNFSPDE VIALLSSHTI ARSDHIDPNI TKAPFDTTPF TFDTQIFLEV LLKGVGFPGS
ANNTGEVESP LPLTVGADIG EMRLQSDFAF AHDSRTACTW QGFVDEQQAM ANAFKNAMAK MAIIGNQRSA LVDCSDVVPQ PVPASGKHAT *
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Retrieve as FASTA
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| Remarks |
5 MnP in the scaffold_28
fgenesh1_kg.28_#_545_#_Locus8806v2rpkm12.81 |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGTATTCA CGACTCTTCT CGCGTTCGTC GGTGTCACCG CATCCGTTGC CCAGGCTGCA TCCCTCAAGC CTAGGGTTAC CTGCCCCAAT GGCCAGAACG CACAGAACAC CGTGTGCTGC
GACTTCTTCG CTCTTCGCGA TGATCTCCAG GCCCATCTGT TAGTATGCTG TAGACTTGCC GAATAGTCTC TGGCTCACTG AAAAACAGAT TTGACAACCA GTGTGGCGAG ACTGTCCATG
AGGTTCTGCG TCTGAGCTTC CGTGAGTTTC CACCCAACAC CAGGCGTCAC ATTGTCCGTT GATCAGTGAC ATGACAGACG ACGCCATTGC GTTCTCGAAG GCTCAAGGAC CGTCAGCCGG
TGGAGGTGCT GATGGGTCCA TGCTCATCTT CCCCAACGTC GAGCCCAACT TCTTCGCGAA CCTTGGTATC AGTGACGGTG TCGGTGATCT GCTCCCCTTC CTCCAAAACC ACAGTACCAT
CACCGCTGGT GATCTCATCC AGTTCGCTGC TGCCGTCGGC ATCACCAACT GCCCGGGTGC ACCCCAACTT GAGTTCTTGG CCGGACGTCC CAATGCTACC GCCCCTGCCA TCGACGGACT
GATTCCCGAG CCCCAAGACT CCGTCGACAG TATCTTAGCC CGTATGGCTG ATGGGGGAAA CTTTTCCCCC GATGAGGTCA TTGCCTTGCT GTCATCCCAC ACCATTGCGC GTTCGGACCA
TATTGACCCC AACATCACAA AAGCCCCCTT CGACACGACG CCCTTCACCT TCGATACCCA GATCTTCCTT GAGGTGCTGC TCAAGGGTGT CGGATTCCCC GGATCCGCCA ACAACACCGG
TATGATCCCC CTCTCTAGCA ACATGCCTTG ACACTGATAG AGTATACTCC AGGCGAGGTG GAGTCCCCCC TCCCGCTGAC AGTAGGCGCC GATATTGGCG AAATGCGCTT ACAGTCAGAC
TTCGCCTTCG CTCATGGTAA GTGCCTCCCA CCTCCTACGT GACTCTGACA AACCTGTTCC CCCAGACTCT AGGACCGCAT GCACGTGGCA AGGCTTCGTC GACGAGCAGC AGGCGATGGC
CAACGCCTTC AAGAATGCCA TGGCTAAAAT GGCTATTATT GGCAATCAAA GATCTGCACT CGTCGACTGC TCCGATGTCG TTCCTCAACC TGTGCCTGCG TCAGGAAAAC ATGCTACGTG
A
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGTATTCA CGACTCTTCT CGCGTTCGTC GGTGTCACCG CATCCGTTGC CCAGGCTGCA TCCCTCAAGC CTAGGGTTAC CTGCCCCAAT GGCCAGAACG CACAGAACAC CGTGTGCTGC
GACTTCTTCG CTCTTCGCGA TGATCTCCAG GCCCATCTAT TTGACAACCA GTGTGGCGAG ACTGTCCATG AGGTTCTGCG TCTGAGCTTC CACGACGCCA TTGCGTTCTC GAAGGCTCAA
GGACCGTCAG CCGGTGGAGG TGCTGATGGG TCCATGCTCA TCTTCCCCAA CGTCGAGCCC AACTTCTTCG CGAACCTTGG TATCAGTGAC GGTGTCGGTG ATCTGCTCCC CTTCCTCCAA
AACCACAGTA CCATCACCGC TGGTGATCTC ATCCAGTTCG CTGCTGCCGT CGGCATCACC AACTGCCCGG GTGCACCCCA ACTTGAGTTC TTGGCCGGAC GTCCCAATGC TACCGCCCCT
GCCATCGACG GACTGATTCC CGAGCCCCAA GACTCCGTCG ACAGTATCTT AGCCCGTATG GCTGATGGGG GAAACTTTTC CCCCGATGAG GTCATTGCCT TGCTGTCATC CCACACCATT
GCGCGTTCGG ACCATATTGA CCCCAACATC ACAAAAGCCC CCTTCGACAC GACGCCCTTC ACCTTCGATA CCCAGATCTT CCTTGAGGTG CTGCTCAAGG GTGTCGGATT CCCCGGATCC
GCCAACAACA CCGGCGAGGT GGAGTCCCCC CTCCCGCTGA CAGTAGGCGC CGATATTGGC GAAATGCGCT TACAGTCAGA CTTCGCCTTC GCTCATGACT CTAGGACCGC ATGCACGTGG
CAAGGCTTCG TCGACGAGCA GCAGGCGATG GCCAACGCCT TCAAGAATGC CATGGCTAAA ATGGCTATTA TTGGCAATCA AAGATCTGCA CTCGTCGACT GCTCCGATGT CGTTCCTCAA
CCTGTGCCTG CGTCAGGAAA ACATGCTACG TGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TCAATTAGGG GGACGTAGGC CACCGGACAG CCTCCACCCT GTGACGCCGA CGCATATGGA AATCTGGCTA TTGGCCATTA CAGCTGTAGT GCATCTCTTC AGAGATCTAA AGCAAAACCA
TATAAATGCG GCGAGGTAGA GGGTAGAGAA TCCTCAACCT ACTTACTTAG CACAGCTAGT TTCCAACTGT CAGCATGGTA TTCACGACTC TTCTCGCGTT CGTCGGTGTC ACCGCATCCG
TTGCCCAGGC TGCATCCCTC AAGCCTAGGG TTACCTGCCC CAATGGCCAG AACGCACAGA ACACCGTGTG CTGCGACTTC TTCGCTCTTC GCGATGATCT CCAGGCCCAT CTATTTGACA
ACCAGTGTGG CGAGACTGTC CATGAGGTTC TGCGTCTGAG CTTCCACGAC GCCATTGCGT TCTCGAAGGC TCAAGGACCG TCAGCCGGTG GAGGTGCTGA TGGGTCCATG CTCATCTTCC
CCAACGTCGA GCCCAACTTC TTCGCGAACC TTGGTATCAG TGACGGTGTC GGTGATCTGC TCCCCTTCCT CCAAAACCAC AGTACCATCA CCGCTGGTGA TCTCATCCAG TTCGCTGCTG
CCGTCGGCAT CACCAACTGC CCGGGTGCAC CCCAACTTGA GTTCTTGGCC GGACGTCCCA ATGCTACCGC CCCTGCCATC GACGGACTGA TTCCCGAGCC CCAAGACTCC GTCGACAGTA
TCTTAGCCCG TATGGCTGAT GGGGGAAACT TTTCCCCCGA TGAGGTCATT GCCTTGCTGT CATCCCACAC CATTGCGCGT TCGGACCATA TTGACCCCAA CATCACAAAA GCCCCCTTCG
ACACGACGCC CTTCACCTTC GATACCCAGA TCTTCCTTGA GGTGCTGCTC AAGGGTGTCG GATTCCCCGG ATCCGCCAAC AACACCGGCG AGGTGGAGTC CCCCCTCCCG CTGACAGTAG
GCGCCGATAT TGGCGAAATG CGCTTACAGT CAGACTTCGC CTTCGCTCAT GACTCTAGGA CCGCATGCAC GTGGCAAGGC TTCGTCGACG AGCAGCAGGC GATGGCCAAC GCCTTCAAGA
ATGCCATGGC TAAAATGGCT ATTATTGGCA ATCAAAGATC TGCACTCGTC GACTGCTCCG ATGTCGTTCC TCAACCTGTG CCTGCGTCAG GAAAACATGC TACGTGAGTA
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Retrieve as FASTA
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