View Redoxidase 16354

Entry information : ClanRboh04(Citlan_Cla001877)

Entry ID	16354
Creation	2020-03-11 (Baptiste Sarrette)
Last sequence changes	2020-03-22 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2020-05-14 (Christophe Dunand)

Peroxidase information: ClanRboh04(Citlan_Cla001877)

Name

ClanRboh04(Citlan_Cla001877)

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Cucurbitaceae Citrullus

Organism

Citrullus lanatus (watermelon) [TaxId: 3654 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	ClanRboh04 start..stop	S start..stop
CsaRboh05	1702	0	1..936	1..925
DgloRboh05	1363	0	1..936	1..927
AgluRboh05	1295	0	1..936	24..946
DtriRboh04	1293	0	7..936	5..950

Literature and cross-references ClanRboh04(Citlan_Cla001877)

Protein sequence: ClanRboh04(Citlan_Cla001877)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	936
PWM (Da):	106197.22	Transmb domain:	o370-389i502-524o550-572i731-748o
PI (pH):	8.78

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MTRSWSSFGI PNSNNSRRSS YTRRLGDADA DADADADDDV DGDCSHEDHT AQGMLPVFLN DLVNVNHQDF VELTLEVEDH SVLVRSIAPL PASSDLQDDA ALSITTRIRN KFPWLRSASS RASTASSLDR DDMAAVSMSA RDARRLHAQL QRTRSRAQAA LRGLRFISNT TGASDANKLW QTVQSRFHSL AHAGLLARED FAQCIGMMDS KEFALRIFDA LARRKGLRIS KINVEELREF WLKISDQSFD ARLQIFFDMA DSNEDGRITR DEVQELISLS ASANNLAKLK ERAEEYASLI MEELDPENLG YIELWQLETL LLQRDTYMNY SRPLSTATSV GWSQNLSLFN PKNIIKTATT TLHSLIFQNW QRIWILFLWG STMAALFTWK FLQYKNKAAF DIMGYCLPTA KGAAETLKLN MALILLPVCR NTLTWLRSTA ARSVVPFDDN INFHKLIACF IAVGVAVHGG VHLVCDFPRL TNSSPEEFEV ISSDFHNKKP SYKELLMSVE GVTGIVMVVL MGISFTLATR RFRRNVVRLP WLFNRLAGFN AFWYSHHLMG FVYLLLLVHG TFLFLAHNWT QKTTWVYVSF PLLLYLGERS LRACRSEYYS VQILKVSVLP GNVFSLVMLK PRGFKYRSGQ YIFLQCPSIS QFEWHPFSIT SAPGDEYLSV HIRTVGDWTR ELKRVFTDHV NSKPVLARAK LGHLVNMERK SQPRLLVDGP YGAPAQDYEN YDVLLLVGLG IGATPFVSIL KDLLNNSRTT EEQMPTESTT ETSRSEDSFG SLNTTPSGKR KLQSRMGTGR AQAYFYWVTR EASSLEWFKG VMDEVAEMDK KGQIELHNYL
TSVYEESDAR STLITMVQAL NHAKHGVDIL SGTRARTHFA RPEWKEVFGR IASKHAYKTV GVFYCGMPML AKELKRLSLE FTRKTATRFE FHKEYF

Retrieve as FASTA

Remarks

Complete sequence from genomic. Incorrect prediction from SymDB.

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGACAAGGT CTTGGTCCTC TTTTGGAATT CCCAACTCCA ATAACTCTCG CCGTTCGAGC TACACCCGCC GACTCGGGGA CGCAGACGCA GACGCAGACG CAGACGCAGA CGACGACGTG GATGGTGATT GCAGCCATGA AGATCATACT GCACAAGGCA TGTTGCCAGT CTTCTTAAAT GACCTTGTTA ATGTTAATCA CCAAGACTTT GTGGAGCTCA CATTGGAGGT TGAGGATCAT TCTGTGTTGG TTCGCAGCAT TGCTCCTCTC CCTGCTTCTT CCGACCTACA AGATGACGCC GCTCTTTCCA TCACTACTAG AATCCGAAAC AAATTCCCTT GGCTCCGCTC TGCCTCTTCT CGTGCCTCCA CCGCCTCGTC TCTCGATAGG GACGACATGG CGGCAGTATC CATGTCTGCC CGTGACGCCC GCCGCCTCCA TGCTCAGCTG CAGCGCACCC GATCCAGAGC CCAGGCTGCC CTTCGAGGCC TCCGATTCAT TAGCAACACC ACTGGTGCCT CTGATGCGAA CAAGCTCTGG CAAACAGTCC AGTCCAGGTT CCATTCGTTG GCTCATGCTG GACTACTTGC CAGAGAAGAT TTTGCTCAAT GCATTGGTGG GAGTTGAAAC AATGTGGCCC ACAGTTTTAA ACCGTATTTC AAATTTAAGT AATTTTTGAA TTTTTGACAG GAATGATGGA TTCAAAGGAG TTCGCGTTGA GAATATTCGA TGCCTTAGCA AGAAGAAAAG GATTGAGGAT TTCGAAAATC AATGTGGAGG AGCTCCGTGA ATTTTGGTTG AAGATTTCGG ACCAAAGCTT CGACGCCCGC CTTCAAATCT TTTTTGACAT GTAAGAGAGT GTTTCTCATT CATTCGTTCT CTCTCTTTCA CTATCTTTTG GAGTTTGTAA CACGAGTCAT TACATTCAAA ACAAACAGGG CTGACAGTAA CGAAGATGGT CGGATTACAA GAGACGAAGT GCAGGAGCTA ATCTCGCTAA GCGCTTCTGC AAACAACCTT GCAAAACTCA AAGAGCGAGC TGAGGAATAC GCTTCCTTAA TCATGGAAGA ACTCGACCCC GAAAACCTCG GATACATTGA GGTAAGATTT TGAATAATTT AACATGATGC CAGAACACAA CGATGAGGCG AGTTCCTTGG GAATCCTTAC AAGTTGTGAA ATGGATTGAT TGATTCAGCT ATGGCAACTG GAGACTTTGC TTTTACAAAG GGACACATAC ATGAATTACA GCAGACCCTT AAGCACAGCA ACAAGTGTAG GATGGAGCCA AAATCTAAGC TTATTCAACC CCAAAAACAT CATCAAAACA GCAACCACAA CACTCCACTC TCTAATATTC CAAAACTGGC AAAGAATTTG GATTCTTTTC CTTTGGGGAT CAACAATGGC AGCTCTGTTC ACATGGAAAT TCCTTCAATA CAAAAACAAA GCAGCATTTG ACATAATGGG GTACTGCCTC CCGACAGCGA AAGGCGCTGC CGAGACTCTA AAGCTCAACA TGGCCTTAAT CCTCCTCCCT GTCTGCCGCA ACACTCTCAC TTGGCTGCGT TCTACTGCAG CGAGATCGGT CGTCCCCTTT GACGACAACA TCAATTTTCA CAAGCTAATT GCGTGTTTCA TAGCTGTCGG GGTCGCCGTC CACGGTGGGG TTCATCTGGT GTGCGACTTC CCGAGATTGA CGAATTCGTC GCCGGAGGAA TTTGAAGTGA TATCGAGTGA CTTTCACAAC AAGAAGCCAA GCTATAAGGA GCTTTTGATG AGTGTTGAAG GGGTAACAGG GATTGTGATG GTGGTTTTGA TGGGGATTTC ATTTACACTT GCTACTCGTC GTTTTAGGAG GAATGTTGTG AGATTGCCTT GGTTGTTCAA CAGATTGGCA GGGTTTAATG CCTTTTGGTA CTCTCATCAT CTTATGGGAT TTGTCTACCT TTTGCTTCTT GTTCATGGGA CTTTCTTGTT TCTTGCTCAT AACTGGACTC AAAAAACGGT AAGCCAAACC GCAACAATTC TCCACTTGTT TCATAGCCAT TTGGTTTTTG TAAATTAAGT TTATACGTAC TACTCTCACT TGTGAGTTTT TTTGTTTTCT TATCAAGTTT TGAAAACTTT TAAAAGTATG TTTTTCTTAA TCTTATTATT GAAATTTAGC TTAGAATTCA AATTCTACCT AGAGAAAGAT GAGACCGCTT GAAACAAAAT TGTGAGCTAA TAAGTACAAT CTTCAAAAAC AAAAAAGAAT CAAAAAGAAT CAAAAGTCAA ATGGTTATCA AACAAGAAGA TCACTCGATC TTGTTTTTGT GTTTTTGAGT TTTGGTGCAA TGGAGTGAAA AGAGGATGAA TTTTTGGTGG TAGACTTGGG TGTACGTGTC TTTTCCTTTG CTGCTGTATC TTGGGGAGAG GAGCCTCAGA GCCTGCAGAT CAGAGTATTA CTCTGTTCAG ATATTGAAGG TAATGTACTA TCTTTCATTT AGTTATTTCT TATTAGTATT TTTTTAATTG TATCTATTTA GTTAAAAATT TTCATTCCTT GGTTGACATT TCTATTAACT TTCTTAGGTT AAAGTTCACT TGAGATGCTA TTGACTATGT TCAGCTTAAA TGAGCTTATT CGAGTATAGT TTAGTGAATA AGAACCAGTT TTCGAGAAAT TGAGTGAGTG TGATTGAAGT GGAACAGGTT TCAGTACTAC CAGGGAATGT ATTCAGCTTG GTGATGTTGA AGCCTCGTGG GTTCAAATAC AGAAGTGGAC AGTACATATT CCTTCAATGT CCTTCAATTT CCCAGTTTGA ATGGTAAGTT TTAAAAACTC CAAATCTTTT TGCTTCAAGA AAAGAGGGAA AAAAAGAAAG AAAATAAGAA AAAAAAAAGC ATAACATTGA AAACAAACCT GCTCAGGCAC CCATTTTCTA TCACTTCAGC ACCAGGAGAT GAGTACCTGA GTGTGCATAT TAGGACCGTG GGGGATTGGA CAAGAGAACT CAAACGTGTC TTCACTGACC ATGTCAACTC CAAACCTGTC CTTGCTAGAG CCAAATTAGG TCACTTGGTT AACATGGAAA GAAAAAGGTA ATTTGTCTTC CTCTATCTTT TCTTTTCAAG TTTGTATCTA TTTAGTTTAT ATCTACTTTT AAGACCTTTT GATGGTTTGT TCAGTCAGCC GAGATTGCTG GTTGACGGGC CGTATGGAGC ACCTGCACAG GACTACGAAA ACTACGATGT GCTTCTCCTT GTTGGACTTG GAATTGGAGC CACCCCCTTT GTTAGTATCC TCAAGGATCT TCTCAACAAC TCTAGAACCA CTGAAGAACA AATGCCAACG GTAAATTAAT AACTTATTTG TAGGGAAnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn GTAGGGAAAA ACATGGTAAT TTGAACTTAT ACATACACGT TTTCAAAAAC TTGTTTTAGT TTTAGATTTT GGCTAAGAAT CCAGTTGTTT CTTTAAGAGT TGTGAAAATA AACTACCATA AATAATAGAA AGTGTAAGAA AAGAAGCACA GTTCTGAAAA ATAAAAAACT AAAAATGATA TTGTTAGAAA CAAGGTCTAA AGTTTACACA TTTTCTTACT AATGGCGTAG GAATCGACAA CGGAAACAAG TAGATCCGAA GACAGCTTTG GATCTTTAAA CACGACGCCA AGTGGAAAGA GGAAGTTGCA AAGCAGGATG GGGACGGGAC GGGCACAAGC ATACTTCTAC TGGGTGACAA GGGAAGCTAG TTCCTTAGAG TGGTTCAAAG GGGTAATGGA TGAAGTAGCA GAGATGGACA AGAAGGTAAG TAAACTTAAA ACTAAAACAA CGACATTAAA TCCATGGAAT GCTTTAGGAA AAAAAATGGA AGTCAAGCAA TTCAAGTAGT GAAATGAATG AATAAATGAA TCAGGGGCAA ATTGAACTCC ACAACTACTT GACGAGTGTG TACGAAGAAA GTGATGCAAG GAGCACATTG ATCACAATGG TTCAAGCTTT GAACCATGCC AAGCATGGCG TCGACATTCT CTCCGGCACA CGAGTAAGTA ACTACGCTAT CTTCGGCCTC TTTCATTCAT TTTCCTCTCT TAAGTGCCCT AATTACATTT GATCGGTCGG TTAAGCTTTT TTAAACAATA GGATTAACAC CATCTAAGAC ATTGCAAGGA CTCACCTTAA TAAAATCATT CTTTAATTAC CAGTGATTTG TGATAACTTT ATTTCTTACA AACTTAAGCT TTTGAGTTTA GAGATTATTA ACGCAATGGC GATGCAGGCA AGGACTCACT TCGCAAGGCC AGAATGGAAG GAGGTGTTCG GGCGAATTGC GTCGAAGCAT GCTTATAAGA CAGTGGGAGT GTTCTACTGT GGAATGCCAA
TGCTGGCCAA AGAGCTCAAG AGGCTATCAC TAGAATTTAC TCGCAAGACT GCAACTAGAT TTGAGTTCCA TAAGGAATAT TTCTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA