View Redoxidase 165

Entry information : ZmPrx20(Zm00001d014467 / GRMZM2G085967 / Peroxidase39)

Entry ID	165
Creation	2006-06-05 (Christophe Dunand)
Last sequence changes	2006-06-05 (Christophe Dunand)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2023-01-09 (Christophe Dunand)

Peroxidase information: ZmPrx20(Zm00001d014467 / GRMZM2G085967 / Peroxidase39)

Name

ZmPrx20(Zm00001d014467 / GRMZM2G085967 / Peroxidase39)

Class

Class III peroxidase [Orthogroup: Prx007]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea

Organism

Zea mays [TaxId: 4577 ]

Cellular localisation

N/D

Tissue types

Meristems
Mixed tissues
Roots
Silks

Inducer

Constitutively induced

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	ZmPrx20 start..stop	S start..stop
SbPrx139	603	0	18..328	21..331
SofPrx01	587	0	18..328	21..331
SiPrx29	576	0	16..328	17..330
TaPrx18-1A	525	0	23..326	26..330

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '165' 'join(47579516..47579722,47579846..47580037,47580137..47580299,47581999..47582423)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	47579516..47579722	205	N° 2	47579846..47580037	190	N° 3	47580137..47580299	161	N° 4	47581999..47582423	423
join(47579516..47579722,47579846..47580037,47580137..47580299,47581999..47582423 )

Literature and cross-references ZmPrx20(Zm00001d014467 / GRMZM2G085967 / Peroxidase39)

Literature	Duvick,J.P., Maddox,J.R., Navarro Acevedo,P.A. and Simmons,C.R. Maize peroxidase genes and their use for improving plant disease resistance and stalk strength
Protein ref.	UniProtKB: B4FNI0 B6THU9
DNA ref.	GenBank: AC195863.2 (24939..27843)
mRNA ref.	GenBank: AY106450.1 BT038668
Cluster/Prediction ref.	UniGene: Zm.5808

Protein sequence: ZmPrx20(Zm00001d014467 / GRMZM2G085967 / Peroxidase39)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	328 (306)
PWM (Da):	35221.12 (33088.8)	Transmb domain:	o162-181i295-317o343-365i
PI (pH):	7.41 (6.50)	Peptide Signal:	cut: 23 range:23-328

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MVRRTVLAALLVAAALAGGARAQLKEGFYDYSCPQAEKIVKDYVK
AHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAEKDAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGA
HTIGISQCNSFSERLYNFTGRGGPDDADPSLDPLYAAKLRLKCKTLTDNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAALITDAASKADILSVINAPPEVFFQVFAGSMVKMGAIE
VKTGSEGEIRKHCALVNKH

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 5, 3 introns) and 242 ESTs. Containing intron shift.

GeneChipÂ® Maize Genome Array ID: Zm.5808.1.A1_at

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGTGAGAAGGACGGTGCTGGCGGCGCTGCTGGTGGCCGCCGCCCTCGCCGGCGGCGCGCGGGCGCAGCTCAAGGAGGGGTTCTACGACTACTCCTGCCCACAGGCGGAGAAGATCGTC
AAGGACTACGTGAAGGCGCACATCCCCCACGCGCCCGACGTCGCCTCCACCCTGCTCCGCACCCACTTCCACGACTGCTTCGTCAGGGGGTACGTACTATAGGAGTTAGCAAACAAGGCG
CTAGCCGCTAGCTGCGTGCGCGGCGACGAATGCCCGATATGCCGATGCCGACGATGACTGACCGCGCCATGCGCTCCCGCCGTTGCACGCAGGGCTGCGACGCGTCAGTGCTGCTCAACG
CGACGGGCGGCAGCGAGGCGGAGAAGGACGCGGCGCCCAACCTGACGCTGCGCGGCTTCGGCTTCATCGACCGCATCAAGGCGCTGCTCGAGAAGGAGTGCCCCGGCGTGGTGTCCTGCG
CCGACATCGTCGCGCTCGCCGCCCGCGACTCCGTCGGCGTCATCTCGTCAGTGCTCCTGATCGAGTCCCCCCCCCACCCCATGCATCTGCGCTTCCTAAGCCGGCAAAACCTATATATAA
ACCGGTCGAACGCGCATGCATGCAGGGCGGTCCGTTCTGGAGCGTGCCGACGGGGAGGCGCGACGGCACCGTGTCCATCAAGCAGGAGGCGCTGGACCAGATCCCCGCGCCCACCATGAA
CTTCACCCAACTCCTCCAGTCCTTCCAGAACAAGAGCCTCAACCTCGCCGACCTCGTCTGGCTCTCAGAGGTACGTACTTCCCCAAACCAAACACCTGACCCCCTCCATGATCCGTTGAC
GCCACACCGTTCTGAGCAGAAGAAGAAGAAGATTATCTTTTCACCTGTCAATCAATCAGCTTAATTTACATGCCAAGGAAGAACTAGACAGATATTAGGCAGTGACAGGTCTGACTAGTC
CTATGATTACAAGCCACGCTTGCGAGTTTATTAAACATTCCAACGGCACCGACACCCAGTGCTGCTACTTTCGCTTTCGCTGGGTCAATCATTTGTTTGGTCAGGCTGGCATAAGCAGTA
CCACTGCTATGATTGTGCTAGAGGACTGGTAGCCTCGTGAGTCGTGACAAACTGTTTTATGATTTGAGAAAATAACTGGACAAACAGCAGGAGCCTAGAACGTTTTAGTAGCAGTTAGTT
CGCTGTCATAGCCGGATTGGACAGACAACCTGAACATGCACAGAGCGGCCCTGCTAGGTAGAAGTACTGCTGTCTTCTCCGTTCCAAATTATAAGCTATATTCTAAAATTATAAAGTATA
AGTTATATTCTAACTTTATAGGTTTTATTTTTTTAATTATAAGATAGTTTAAGATTTCTAAATTTCTAATTTTTTACTATATATCTAGACATAATATGTATTTAGCGACGTACTAGCATG
TAGCAAAAGCTATAAGTTTTAAAAAGTCAGGAAAAAAACTTTTTTGATTTAGAACAAAGGGAATAGCACGCGTTACTGAATAATGGCATCCATTTGTCCGTCAGAGCTATCTACCATATA
AAAGACAAAGTTCGTACTGTGGGTCAAGTCGACATCTAAAAGGCAAAAGTTGAGCACCTAACAGTATTTATTGACGGTGCGTGCATGCACGAATCAGCGTTAGGAAGCATAGTTCTGTCT
TTCTAGATAGACTAATAACTAGAGTGAATCCGTAGCCAACAGAAATGGAGGCGATTAAATTGGGCAACTGCAAGTCTGTTGTCTCCTCATCTTTCAGTCTTCGGGTTAGTGCAGTAGTGT
CAGGCACAGGCGCTGAGCCGAGTAGAGTAGCTAGCCGACAGCTGCACATCGTCCTTGAGGAGAGACACAGCATGTTAGTAGTTAGCATCTAATGGATGCAGCCGGAGTTTGGTACCCAGG
AAATGATTCAGTACGGCAGAGATAAGATAAATTTGTGTAAGGAACCACTTTTGAGGATAACGGACAGAGAGTGTATCTGACCTTATTACGTCCCAGGCAGGCTTAACTTTCATCATCCTT
CAGAGCAGGCCGTCTTGCTGAAAGTAAAAGAAGAGACTGATGAGTGATGACACGTGGAGGAGAACTTGGAATCTGAATAATAATAATGCGTATACTCTTCATCATTTGAGGACGAGACTT
GTTTGGGCCACCGATGGGCTTCCATTTCTCGTATGTGCGTGCGTGACATTAAACGGCAACCTCTTCTGATGCAGACATGCTCGCTGCTGCCAACTGCTGCCTCGGTCTATATTCCAATCT
ATCATAGAAGACGAGCCTTTATTGTGCATGCAGACTCCAGAAGTCCAGAGCGATACTTCTGAAATAGTAGTCCTTTTCGTAGAACATGCCCTCGATCCGTTGATGGTGCCTTAAAATACG
TACCTGAATAGCTCCAAAAAAACCACACACACACACACACTGAACAGTTCACAGGCATTCCTAATCACTTCTCGCGTGTGTACGTGCAGGGGCTCACACGATCGGCATCTCCCAATGCAA
CTCCTTCAGCGAGCGCCTGTACAACTTCACGGGGCGCGGCGGGCCCGACGACGCGGACCCGTCGCTGGACCCGCTGTACGCCGCGAAGTTGCGGCTCAAGTGCAAGACGCTGACGGACAA
CACGACGATCGTGGAGATGGACCCCGGCAGCTTCCGCACCTTCGACCTGAGCTACTACCGCGGCGTGCTCAAGCGGCGGGGCCTGTTCCAGTCCGACGCCGCGCTCATCACCGACGCCGC
CTCCAAGGCCGACATCCTCAGCGTGATCAACGCGCCGCCCGAGGTGTTCTTCCAGGTCTTCGCGGGCTCCATGGTCAAGATGGGCGCCATCGAGGTCAAGACCGGCTCCGAGGGCGAGAT
CAGGAAGCACTGCGCCCTCGTCAACAAGCACTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA