Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
328 (308) |
PWM (Da): |
36046.69 (34017.6) |
|
PI (pH): |
4.47 (4.41) |
Peptide Signal: |
cut: 21 range:21-328 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MKIGVAAAAI LFCCAVVTVA TNNDNNYSSP LNPPLAFDFY KDSCPQFHSI VSERVANYTA QDPTTPAPLL RLFFHDCFVQ GCDASVLLDS LPNDASEKDA DVNFSIDGFD VIDDIKERLE
HRCPGVISCA DILAVTAVYS IYQAGGPLYE IELGRRDGLT SYNSSASIFL PASTLDVDGL LQSFEIAGLD LFDLVALSGG HTIGQGHCKS IKDRLYPKVD SAYNAPQFDE EVQYFMDSFT
ALKFDNSYFK GLQQGFGVFT SDKVLYEDER TQSLVDLFAY NQTKFFHQFG TSLRKMGKIG VLTGTQGQIR AKCSIRNSNN DDHALDLP*
|
Retrieve as FASTA
|
|
Remarks |
Incorrect prediction from SymDB (last exon was misiing) |
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAGATAG GGGTAGCAGC AGCTGCCATA CTCTTCTGCT GCGCCGTGGT AACGGTGGCT ACCAACAACG ATAACAACTA TTCGAGTCCT CTAAATCCGC CGCTTGCGTT CGATTTCTAC
AAGGATAGCT GCCCGCAATT TCATTCCATC GTGTCGGAAC GAGTGGCGAA CTACACAGCA CAGGATCCCA CCACTCCAGC TCCCCTGCTC CGCCTATTCT TCCACGATTG CTTCGTCCAA
GGCTGCGACG CCTCTGTTCT CCTCGATTCC TTACCCAACG ACGCATCCGA GAAGGATGCC GACGTTAATT TCAGTATCGA TGGATTCGAT GTCATCGACG ACATCAAGGA ACGCCTCGAA
CATCGCTGCC CTGGCGTCAT CTCTTGCGCG GACATCCTCG CCGTAACGGC CGTCTACTCC ATCTATCAGG TAAGTTAACT AATTGGTGAA ACTAAGTTCC GTTGATGATT CACGCGTTTA
TACATCTCCA TCTATTTATA CAATATATGA GCATACGCTC CATACAATAT ACTGCAGCTG TACATATCCG ATCGCGAGTG GGTTCCATGC ATGGATAGAT TCAAGCATAC ATATATATAA
AAGTATATAT ATAAGGTGAT CTCCCTAGCG ACGACGTCGT CGAGGCCCGC TAATTCGACG TGAATCTGAC GGGTGCTAAT TAAATACGCA TTTCTGTATA TATTTATAGG CAGGGGGGCC
TTTGTATGAG ATAGAACTGG GGAGACGAGA CGGTTTGACT TCGTACAACT CCAGCGCTTC CATTTTCCTT CCGGCGTCCA CGCTCGACGT CGACGGTCTT CTGCAGAGTT TCGAGATAGC
CGGACTCGAC CTTTTCGATC TCGTCGCGCT CTCCGGTATA GTATATCTAA TAGCTTACTT AATCAATTAA CCACCTACGT ACGTTCCAAT TAATGAATTA ATTCGTCCAC ATTTCTTCGA
TTCAATTATA GATTGTGGTT CCTAAATTAG CACCATTAAA CCAATCTAAT TAAGTTATTC TATTTCGCTT GCATACGCAT TTGTGGACGA CGTATATACG TTCACAGCAG TTGTCGAGCT
TGCCAAATTC CGGGAGATAT TACTGGGTAC GTAGTACTGG GTAGAATCAT GTCACGGCCG GTAAAATTAA ACAGAAGCGG AATTATGGCC GGATCGGACG TATATGCTAT AGGTATAACT
AGCTATAGAC GTTGCGAAAT TAAGAGGTCG CTTGGACGTA ATTAGGGACA GACTTCACGA TTGGTACATT GAATTAATGG CATACCATGA TCTAGCTACA GATACATGAA CATATGTAAA
ACTATATGGT CAGGTACTTA CAAGTTTAAT TCCCGGTATT TGAGCACTGC TCTTTGCCCA AGTGCATAAG TCCTGATATA GTTCTCCCTA TAAAAAGTGG TAACACCACC AAATGCAATT
GATCATTATA AGAATTCCAA GAATACTATT TGGAGCATCA AGTTAGCTAG ACACATTCAG TATAACATAG ATCTATAGAT TCTTGTTAAG CAATATGTCA TGATATAGCC ACATAACATA
GACCCATAGA CTTAAATTGA TAAGCTTGCA ATATGTACTT GAGATCATTT TTTTTTGGTA CATAAACATT CTGTCATGAG AGAATTGCAT GGTCAATCTT TTGACCCTCT CCTTAGCATA
ATCGGTGAGG ATAATGTTCA CTTATAACGA AACTTTGTTT AGATCTATAT ATATGGTTTT GATATATGTG TGTGTCTTCC ACTACTTGAG CCATCAAACC CAATTTTCTA CTTGAGCCAT
TGAACCCAAT TTTCTATATA TATATATATA TAGGGGGACA CACGATTGGG CAAGGACATT GCAAGAGCAT TAAGGATCGA TTGTACCCAA AAGTGGATAG TGCATACAAT GGTAGTCTAG
GTCAACACTT GCTTTACAAC TGCACCGACG GTGGTCGATT GGCAGCCCCA CAATTTGATG AGGAGGTGCA ATATTTCATG GACTCATTCA CAGCACTCAA ATTCGACAAT AGTTACTTCA
AGGGGTTGCA ACAAGGATTT GGGGTGTTCA CATCGGACAA GGTGCTCTAT GAGGATGAAC GCACACAGTC ACTCGTTGAT CTCTTCGCAT ATAACCAAAC AAAATTCTTC CATCAATTTG
GAACATCATT GCGCAAAATG GGCAAGATTG GAGTCCTCAC AGGCACACAA GGCCAAATTC GTGCCAAATG TTCAATTCGC AACTCAAACA ATGATGACCA TGCCCTTGAT CTGCCTTGA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAGATAG GGGTAGCAGC AGCTGCCATA CTCTTCTGCT GCGCCGTGGT AACGGTGGCT ACCAACAACG ATAACAACTA TTCGAGTCCT CTAAATCCGC CGCTTGCGTT CGATTTCTAC
AAGGATAGCT GCCCGCAATT TCATTCCATC GTGTCGGAAC GAGTGGCGAA CTACACAGCA CAGGATCCCA CCACTCCAGC TCCCCTGCTC CGCCTATTCT TCCACGATTG CTTCGTCCAA
GGCTGCGACG CCTCTGTTCT CCTCGATTCC TTACCCAACG ACGCATCCGA GAAGGATGCC GACGTTAATT TCAGTATCGA TGGATTCGAT GTCATCGACG ACATCAAGGA ACGCCTCGAA
CATCGCTGCC CTGGCGTCAT CTCTTGCGCG GACATCCTCG CCGTAACGGC CGTCTACTCC ATCTATCAGG CAGGGGGGCC TTTGTATGAG ATAGAACTGG GGAGACGAGA CGGTTTGACT
TCGTACAACT CCAGCGCTTC CATTTTCCTT CCGGCGTCCA CGCTCGACGT CGACGGTCTT CTGCAGAGTT TCGAGATAGC CGGACTCGAC CTTTTCGATC TCGTCGCGCT CTCCGGGGGA
CACACGATTG GGCAAGGACA TTGCAAGAGC ATTAAGGATC GATTGTACCC AAAAGTGGAT AGTGCATACA ATGCCCCACA ATTTGATGAG GAGGTGCAAT ATTTCATGGA CTCATTCACA
GCACTCAAAT TCGACAATAG TTACTTCAAG GGGTTGCAAC AAGGATTTGG GGTGTTCACA TCGGACAAGG TGCTCTATGA GGATGAACGC ACACAGTCAC TCGTTGATCT CTTCGCATAT
AACCAAACAA AATTCTTCCA TCAATTTGGA ACATCATTGC GCAAAATGGG CAAGATTGGA GTCCTCACAG GCACACAAGG CCAAATTCGT GCCAAATGTT CAATTCGCAA CTCAAACAAT
GATGACCATG CCCTTGATCT GCCTTGA
|
Retrieve as FASTA
|
|