Entry information : MePrx03 ( cassava4.1_011662m)
| Entry ID | 1662 |
|---|---|
| Creation | 2005-06-17 (Qiang Li) |
| Last sequence changes | 2016-02-24 (Christophe Dunand) |
| Sequence status | complete |
| Reviewer | Achraf Jemmat |
| Last annotation changes | 2016-02-24 (Achraf Jemmat) |
Peroxidase information: MePrx03 ( cassava4.1_011662m)
| Name (synonym) | MePrx03 ( cassava4.1_011662m) | ||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Class | Class III peroxidase [Orthogroup: Prx032] | ||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Viridiplantae Streptophyta Euphorbiaceae Manihot | ||||||||||||||||||||||||||||||||||||
| Organism | Manihot esculenta (cassava) [TaxId: 3983 ] | ||||||||||||||||||||||||||||||||||||
| Cellular localisation | N/D |
||||||||||||||||||||||||||||||||||||
| Tissue types | Roots Tubers |
||||||||||||||||||||||||||||||||||||
| Inducer | N/D |
||||||||||||||||||||||||||||||||||||
| Repressor | N/D |
||||||||||||||||||||||||||||||||||||
| Best BLASTp hits |
|
||||||||||||||||||||||||||||||||||||
| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1662' 'join(45759..45974,46047..46244,46519..46684,46857..47314)' |
Exons►
|
||||||||||||||||||||||||||||||||||||
Literature and cross-references MePrx03 ( cassava4.1_011662m)
| Literature | REFERENCE 1 Reilly,K., Bernal,D., Cortes,D., Gomez-Vasquez,R., Beeching,J.R. and Tohme,J. Knowledge and tools for the modulation of post-harvest physiological deterioration in cassava Unpublished.
REFERENCE 2 Lopez,C., Jorge,V., Piegu,B., Mba,C., Cortes,D., Restrepo,S., Soto ,M., Laudie,M., Berger,C., Cooke,R., Delseny,M., Tohme,J. and Verdier,V. A unigene catalogue of 5700 expressed genes in cassava. Plant Mol. Biol. 56 (4), 541-554 (2004). |
|---|---|
| Protein ref. | UniProtKB: Q52QY2 |
| DNA ref. | Phytozome 12: scaffold03486 (45759..47340) |
| mRNA ref. | GenBank: AY973612 |
| EST ref. | GenBank: DN740367 [5' end] |
Protein sequence: MePrx03 ( cassava4.1_011662m)
| Sequence Properties first value : protein second value (mature protein) |
|
||||||||||||
| Sequence Send to BLAST Send to Peroxiscan |
|
||||||||||||
| Remarks | Complete sequence from genomic (3 introns), 1 mRNA and 2 ESTs (DR086520.1). join(45759..45974,46047..46244,46519..46684,46857..47340). | ||||||||||||
| DNA ► Send to BLAST |
|
||||||||||||
| CDS► Send to BLAST |
|
||||||||||||
