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Entry information : AtrPrx[P]73(AmTr_v1.0_scaffold00029.233)
Entry ID 16658
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx[P]73(AmTr_v1.0_scaffold00029.233)
Name AtrPrx[P]73(AmTr_v1.0_scaffold00029.233)
Class Class III peroxidase     [Orthogroup: Prx011]*
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx[P]73
start..stop		 S start..stop
AtrPrx58 475 5.16e-171 21..314 1..295
AtrPrx78 471 2.5e-169 21..314 23..310
AtrPrx47 457 7.35e-165 72..314 2..244
VvPrx33 421 3.4e-149 11..314 21..327
Literature and cross-references AtrPrx[P]73(AmTr_v1.0_scaffold00029.233)
Protein sequence: AtrPrx[P]73(AmTr_v1.0_scaffold00029.233)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   313 (289)
PWM (Da):   %s   33574.96 (31235.8) Transmb domain:   %s   i5-27o
PI (pH):   %s   4.24 (4.24) Peptide Signal:   %s   cut: 25 range:25-313
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGFSVSITGA LVIVLVCISG MCSAQLSSNF YDTSCPKALS TIRSAILSAI SDERRMGASL ICLHFHDCFV NGCDGSLLLD DTSSFSSEKN SRANNNSTR* FEVIDEVKSE VESICPGVVS  CADILAVAAR DSSEAMGGPT KTMKLGRRDS ATASESAAND NLPTFRDNLE ELISLFSNKG LDRQDMVALS GAHTIGQAQC FTFRERIYNE ANMDSGFAST RQSDCATDDD DDELAPLDLV 
TPRNFDNNYF KNLVELKGLL HSDQVLFSNG STDGLVTTYS NSQSTFFTDF ASAMVKMGDI EPLTGSSGQI WANC 

Retrieve as FASTA  
Remarks Incorrect prediction (only last exon was predicted). Exon 2 with stop in frame and last exon with frame shift. Also found in AmTr_v1.0_scaffold00946.1