Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
328 (306) |
PWM (Da): |
34655.51 (32211.2) |
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PI (pH): |
5.78 (5.37) |
Peptide Signal: |
cut: 23 range:23-328 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MARRVIIILL CSLNLLLDFS CGSLQVGFYS STCPAAESIV RSAVQAAITA DQTIAAPLLR LHFHDCFVQG CDGSILIDGR NSEKTSPTNA GLRGFDVIND AKSQVEQACP GVVSCSDIVA
LAARDSVSMS GGPNYQVETG RRDGLVSVAS DTDSMPGVNE PISVLKAKFA AKGLSASDLV LLSGGGHSIG TTACFFITKR LYEFTSKGVS DPSINPSFLP ELEATCPLNG DVNVRLALDR
RSQFVFDKNI LNNIRSGYAV LASDAQLYED PSTQRVVDSY FGLLGGLLPG LLGPSFDQDF GSAMVKMGRV GVKNGSMGEI RRVCSRFN
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Retrieve as FASTA
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Remarks |
Incorrect prediction, first exon is missing. Eurfer_20_2511991_2514785_g20497.t1_1_CDS_2836132079_25552 |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCAGAA GAGTAATCAT CATTCTCCTC TGTTCCCTCA ATTTGCTGCT GGATTTTTCA TGTGGATCCC TTCAAGTGGG TTTCTACTCC TCCACCTGCC CTGCTGCCGA ATCCATCGTC
AGATCTGCTG TTCAAGCCGC CATCACTGCT GACCAGACCA TCGCTGCTCC CCTGCTTCGG CTTCACTTCC ATGACTGCTT TGTTCAGGCA TATTCACGAA ATTTCTAGAC TCTGCTTTCA
CCTGTGCAGC TCCATTTATG TGTTTTGATG CCTTGCAACC TGAAATTTCC TTTTCTTTTG TCCAGGGATG TGATGGATCT ATTTTGATCG ATGGCCGGAA TTCCGAAAAG ACCAGTCCAA
CCAATGCAGG CCTAAGAGGG TTCGACGTGA TCAATGACGC GAAATCTCAG GTGGAACAAG CATGCCCAGG TGTTGTTTCA TGCTCGGACA TAGTGGCCTT GGCAGCGAGA GACTCTGTTT
CCATGGTAAC ATGCTGCATC ATGCACTCAT ACTGAGCATT CATTTCCTGC AGGGCAGTTG AGCATTAGTT TCAGACTCAC TTGTTGTGAT AATAGAATCA GTAATTAGAG AAATGTCGTT
TTGTTTGTAG AGTGGAGGGC CAAATTATCA AGTTGAAACA GGAAGAAGGG ATGGGCTTGT TTCTGTGGCT TCTGATACTG ACAGCATGCC TGGTGTCAAT GAACCCATCA GTGTACTCAA
GGCAAAGTTT GCAGCAAAAG GGCTCTCTGC TTCAGACTTG GTTCTTCTAA GTGGAGGTAA AGAAAGAAAA TTACAGGAGT TATAACATGA TGAAATGAAA CTCACATTAG CAATAATAAT
AACCATGGAC TGCTACATAC CAAAAGCTAA ACCATTGATT TTATTTTTCT TATAAAAATT TACAGAAAAA CAAATATTGA AGGAAAAATA TGAAGATTTT ATGTTTGAAT GCTATAGATG
CTTGAATTAG ACTGAAAAAT GATGTTAATT CTGAACATGA GTATGCTTTC ATTTTCTTGA GTGTCTTTGT GTCATTCCTT TTTAAACATG TAAAATTGCA TGGGAGAGCC AAACAGATTA
GCTGTTGTTA TTAATCACAA TGCCATGTGA ATTTTACATA AAGCAGAGCT CTACCAGTGA AGTTGGTTGC TTGAGTGATC TATAAGGAAC TCAGTTTTCT CCTCTACCAA AGCATGATGC
TAATTACTAT TCAAATAACT AGTAGGGCTC ACTACATTAA TTGAGAGGGT ACTCTTACAT GAGAAGAAAA TTGTTTTTGG TATTTGGATC ACTCAAAAAA TTTTATCTTA ATATTGTAAA
TATTGGTTTT CACTGTTGGA AACTTTGTGA AATTGTATAA ATAAGCCGAT ATATTGATTT TATCATTAAG GGCATGAAGA ACCCGGCACT TAACCCCGGA GTTTTACATA GATATTGTAT
CATCCATACA CATTAAACCA AGTTTAAGAA AGTTATTAGA AAATCAGGTT GTCATAAATT TGATTTTAAG AAACATCAAT TTTTTTAAGG TACCAATCAA ACGCAACCTA GGCCTCATAA
TTGTGCACCA ACTCAAGACA CTTAATTTCA TTATACACCA GCTTAGATCG ACACCTAATC TATTATATTT GAGGTTGGAA GATCTCAATT ACTCGACTAC TTAGCTCGAC ATAAGATATT
ATCTATAGGT TAATTAAAAT CCGACCTACC ATTCAAAGAG ATCTCTATTA AACAACTATA TATGTATATA CATATAGAAT TCCGACCTTC ACAACCACAA TATGTAGTTC AATATATATA
TATATATATG TGTGTGTAAG CATGAAGTTT GATATTATTA TTTTTTTAGA AAGCAGGTTA TGTGTTATGC ATATCATCTA TTACCTATTA ATATGATAGC AGGCTTCAAT GCATGCATCA
ATTAGCACAA GACACACAGA CCTCACACCC TCATTTTCCT TGCCTAAATG ATTGATACAT TTAGCTTTTA ATCTACAAAC TAAGTTTATG TGACATGGTA GTTTAGTATA TTTCTTAGAT
GGAGCAAATG ACATTAATAT GTCGATGAAA GAAAAGGAGA GTCAGAAAGA AGGAAGAGTT GAAGACTAAA ATGAAATATG ACATGACTCT TCATTGAGTT AGAGTAGGAG CGGATGTAGT
AAGGTAGTGG ATTGTGAATC CACCATCCCT TATTGGGATT AAGCCAATTG TCGTTAAGTA AATAGGAATC GGTGTTATCA AAGAATTTCC TGTGATTATT CTTAGTATGG AGTGACTCAA
TCACTTTGGT ATCTTATTGA ACAAAAATGC TGACATTGTT CCCCCATTGA TCAAGAATTT TGATCTTTGG GAAGTATCAT GATCATCCAA TAAAAAAGGT TTCAATTTAT TCAAATAAAC
GATTTATACG CCTATTGATT CTAACAACTG ATTGTAGATA ACATTTATTG ATACAATTGA AACATACTTA GTTTGAAACA TTTTTCATCA AACCAGCTTT TTTGTTCATC TAATGTAGCA
TTTTTGCATA TTCCTATAGA TATTTGCAAT TTTCTTGCTT GACTTTCTTA AAATTCCAAG AAAGTGATTA AACTTAATGA AATTACCAAA CTTGGCAGGG GGACATAGCA TAGGCACGAC
CGCGTGCTTC TTCATCACCA AACGCCTCTA TGAATTCACT TCCAAGGGAG TGTCCGACCC ATCCATAAAT CCGTCGTTCC TGCCAGAACT GGAAGCAACC TGCCCGCTGA ATGGCGACGT
CAATGTCCGG CTGGCCTTGG ACAGGAGAAG CCAGTTCGTG TTTGATAAGA ACATCCTGAA CAACATAAGG TCCGGGTACG CGGTCCTCGC CTCGGACGCA CAACTCTACG AGGACCCATC
AACCCAACGA GTCGTGGACT CGTACTTTGG ACTGCTCGGT GGGCTCCTAC CCGGTTTGCT CGGTCCATCC TTTGACCAAG ACTTTGGAAG TGCCATGGTG AAGATGGGTC GGGTCGGCGT
GAAAAATGGA TCGATGGGTG AAATCAGAAG AGTATGCTCC AGATTCAATT GA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCAGAA GAGTAATCAT CATTCTCCTC TGTTCCCTCA ATTTGCTGCT GGATTTTTCA TGTGGATCCC TTCAAGTGGG TTTCTACTCC TCCACCTGCC CTGCTGCCGA ATCCATCGTC
AGATCTGCTG TTCAAGCCGC CATCACTGCT GACCAGACCA TCGCTGCTCC CCTGCTTCGG CTTCACTTCC ATGACTGCTT TGTTCAGGGA TGTGATGGAT CTATTTTGAT CGATGGCCGG
AATTCCGAAA AGACCAGTCC AACCAATGCA GGCCTAAGAG GGTTCGACGT GATCAATGAC GCGAAATCTC AGGTGGAACA AGCATGCCCA GGTGTTGTTT CATGCTCGGA CATAGTGGCC
TTGGCAGCGA GAGACTCTGT TTCCATGAGT GGAGGGCCAA ATTATCAAGT TGAAACAGGA AGAAGGGATG GGCTTGTTTC TGTGGCTTCT GATACTGACA GCATGCCTGG TGTCAATGAA
CCCATCAGTG TACTCAAGGC AAAGTTTGCA GCAAAAGGGC TCTCTGCTTC AGACTTGGTT CTTCTAAGTG GAGGGGGACA TAGCATAGGC ACGACCGCGT GCTTCTTCAT CACCAAACGC
CTCTATGAAT TCACTTCCAA GGGAGTGTCC GACCCATCCA TAAATCCGTC GTTCCTGCCA GAACTGGAAG CAACCTGCCC GCTGAATGGC GACGTCAATG TCCGGCTGGC CTTGGACAGG
AGAAGCCAGT TCGTGTTTGA TAAGAACATC CTGAACAACA TAAGGTCCGG GTACGCGGTC CTCGCCTCGG ACGCACAACT CTACGAGGAC CCATCAACCC AACGAGTCGT GGACTCGTAC
TTTGGACTGC TCGGTGGGCT CCTACCCGGT TTGCTCGGTC CATCCTTTGA CCAAGACTTT GGAAGTGCCA TGGTGAAGAT GGGTCGGGTC GGCGTGAAAA ATGGATCGAT GGGTGAAATC
AGAAGAGTAT GCTCCAGATT CAATTGA
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Retrieve as FASTA
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