Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
322 (293) |
PWM (Da): |
34761.22 (31317.6) |
Transmb domain: |
i7-26o |
PI (pH): |
7.11 (6.65) |
Peptide Signal: |
cut: 30 range:30-322 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MARSTSFSFF FFIFFFFVAF CSLHSFSHAQ LTSSFYSTSC PLALATIGTL VRTNVLLQPR LGASLVRLHF HDCFVNGCDA SVLLDDSATI QSEKSAAPNM NSLRGFELVD TIKAALEVIC
PGVVSCADIL AVAARDSVSM LGGPTYTVLL GRRDSLIANQ SGALADLPPP NFSLTQLNDS FARKRLSFAD MIALSGAHTF GRARCVNFRD HLNESNIDPT FAATLRTTCN SSADDNNLAN
LDVSTPNAFD NAYYTNLINR RGLLHSDQEL FNGGAADATV RTYSTNPSTF FTDFGNAMIK MGNISPLTGT SGQIRQNCRR VN
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Retrieve as FASTA
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Remarks |
Incorrect prediction, contains two ORF, one partial with only the last exon, and one without the first exon. Eurfer_4_28508598_28519530_g21392.t1_1_CDS_2836175339_38378 |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTCGTT CAACATCGTT CTCCTTCTTC TTCTTCATCT TCTTCTTTTT TGTTGCTTTC TGTAGCTTGC ATTCTTTCTC ACATGCACAA CTCACGTCTA GTTTCTACTC CACTTCGTGC
CCTCTTGCAC TCGCTACGAT CGGAACGCTT GTCCGAACGA ATGTGCTGTT GCAACCGAGG TTGGGTGCTT CTCTTGTTCG CTTGCACTTT CATGACTGCT TCGTTAACGT ATGTTCCTCA
TCTGCTCCTG CTTCTCACGT TATTTCATAT ATATTTTCTT CTCGAGAAAA ATAGAATTTT CCGGTAGCAG TTGCAAGTTG CTACCCAAAA AGTGGTCGCT AATAACTAAA CAGAAAAGAT
GAGGCCCTTC ACTGGGTTTA CAACAGAAAT CTTGGATGCC AAGGAAAACA TCCCTGCAAA GAATAATGCA TGAATTATGG CTCATCGTGT GTGGTCTCTC ACTGTTGATT CGTACTCTAC
TGTGTGAATC AGGGATGTGA TGCATCGGTG CTGTTAGACG ACTCTGCAAC TATCCAGAGC GAGAAGAGCG CAGCTCCAAA TATGAATTCA TTGAGGGGAT TCGAGCTCGT CGACACCATT
AAAGCTGCAC TAGAAGTTAT TTGCCCTGGA GTGGTTTCTT GTGCTGACAT TCTCGCAGTT GCTGCACGGG ACTCCGTTTC CATGGTAAGC CTTCAGCCTT GCTTGCATAT ATACATATGT
GTGTGTCATG TATTCATGTG CCTGTGCCAT TAAGTATGCC AACTTGGTGG TCACTTCCAG ACTGCTTTTA TCTTAGCCAC TAAGACGAAC AAGGGACATT TGGCAGAATG CAGGAACACT
AACACAAGCT TCAAATGATT ACTGTATTAG TGTGCCCGAT TCCAAGCGTC CTGCACACGT ACAGACAACT GAGAAGGCAA TCTTAATCGA CAGTATTTTA ATTCAATCCA AGCACATAAT
ATATATATAT ATAAGATCTA AAAGGTCTTA CAATGTATAT TAATGAATTT AAGAACTTCA AAATTTTAGA AGTGTTAGCC TCTTTATACT AGTTGTTCTA ATATCATTCG AGACAAAAAT
TTAGGTCAGT TTTGACGAGG ACCAGTACTA CAGAATCAAT TTTCAACTCT ACTTGTTTGG TTTCCCCTGT CAACTCTACC TCAGCTCTTC TACTGCTAGA GTTTTTGACA ACGTCGCTAA
CTCCTTTTGC TCGATATTAT AAGCTCGGCG GCCCCACGTA TACAGTGCTG CTAGGCAGAA GAGACTCGCT TATAGCAAAC CAAAGTGGTG CCCTCGCCGA CCTTCCTCCC CCCAACTTCA
GCTTGACTCA GCTCAATGAT TCCTTCGCGA GGAAACGCCT AAGTTTTGCA GACATGATTG CTCTCTCAGG TGATTACTCT TAACTATGGT GATTACTCTT ATTTCCTAAT AATTAATTAC
CTAAAGTACT TTGGGTCCTG CACCCCAAAA AAAAGGAAAT ACTTTTTACT TCTCTTTCAA CCCACCAAAG ATTTAGCTAA GGGAAGCAGC AACCAATTGA GCATGAAATC CAATTCTGCT
TCTGCAACTT TTACATACGA ATGCATGACC CAGTTTGGGC GCAGGATTGT GAATCTAATA ACTCAGATAT TACATATTAT ATATATAATC AAATTAAATG ATATTGTATC AAATGGAAGG
CTTATATATG CCAAGGTTTC CCAAATTCAG TTAACTGATG ATGTATGATC TTGTGAATAG GCGCTCATAC GTTCGGGAGA GCGAGGTGCG TAAATTTCCG CGACCACTTA AATGAGAGCA
ACATTGATCC AACCTTTGCG GCGACTCTGA GAACCACTTG TAACTCTTCA GCGGATGACA ACAATCTGGC GAATCTGGAC GTCTCTACTC CTAACGCCTT CGATAATGCA TATTACACAA
ACCTCATAAA CAGGCGGGGC CTTCTTCACT CTGATCAAGA GCTCTTCAAT GGTGGCGCTG CAGATGCGAC AGTGAGAACC TACAGCACAA ACCCTTCCAC TTTCTTCACT GACTTCGGCA
ACGCGATGAT CAAGATGGGG AACATAAGCC CCCTCACCGG AACCAGTGGA CAGATAAGGC AGAACTGCAG AAGAGTGAAC TAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTCGTT CAACATCGTT CTCCTTCTTC TTCTTCATCT TCTTCTTTTT TGTTGCTTTC TGTAGCTTGC ATTCTTTCTC ACATGCACAA CTCACGTCTA GTTTCTACTC CACTTCGTGC
CCTCTTGCAC TCGCTACGAT CGGAACGCTT GTCCGAACGA ATGTGCTGTT GCAACCGAGG TTGGGTGCTT CTCTTGTTCG CTTGCACTTT CATGACTGCT TCGTTAACGG ATGTGATGCA
TCGGTGCTGT TAGACGACTC TGCAACTATC CAGAGCGAGA AGAGCGCAGC TCCAAATATG AATTCATTGA GGGGATTCGA GCTCGTCGAC ACCATTAAAG CTGCACTAGA AGTTATTTGC
CCTGGAGTGG TTTCTTGTGC TGACATTCTC GCAGTTGCTG CACGGGACTC CGTTTCCATG CTCGGCGGCC CCACGTATAC AGTGCTGCTA GGCAGAAGAG ACTCGCTTAT AGCAAACCAA
AGTGGTGCCC TCGCCGACCT TCCTCCCCCC AACTTCAGCT TGACTCAGCT CAATGATTCC TTCGCGAGGA AACGCCTAAG TTTTGCAGAC ATGATTGCTC TCTCAGGCGC TCATACGTTC
GGGAGAGCGA GGTGCGTAAA TTTCCGCGAC CACTTAAATG AGAGCAACAT TGATCCAACC TTTGCGGCGA CTCTGAGAAC CACTTGTAAC TCTTCAGCGG ATGACAACAA TCTGGCGAAT
CTGGACGTCT CTACTCCTAA CGCCTTCGAT AATGCATATT ACACAAACCT CATAAACAGG CGGGGCCTTC TTCACTCTGA TCAAGAGCTC TTCAATGGTG GCGCTGCAGA TGCGACAGTG
AGAACCTACA GCACAAACCC TTCCACTTTC TTCACTGACT TCGGCAACGC GATGATCAAG ATGGGGAACA TAAGCCCCCT CACCGGAACC AGTGGACAGA TAAGGCAGAA CTGCAGAAGA
GTGAACTAG
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Retrieve as FASTA
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