Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
333 (310) |
PWM (Da): |
36723.51 (34200.1) |
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PI (pH): |
8.14 (7.71) |
Peptide Signal: |
cut: 24 range:24-333 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MRKMSSIPLF IFVVFGLLSA SQAQLKHGFY EKSCPQAERI VQAFVNEHVR NAPPLAAALL RLHFHDCFVR GCDASLLLNS TKDNKAEKDS PPDMGMRGFD FIDAVKSKLE ESCPGVVSCA
DVVALVARDA VVRIGGPHWN VPTGRRDGTV SLASETPTNI PPPTLSFSDL KDSFAKKNLN VKDLVMLSGE SSFYTLHCAH TIGITTCSFV SKRLYNFTGK GDQDPTMDKF YAANLKKYKC
KTPQEDTMLE MDPGSFTTFD TRYYTNVVKR RGLFTTDLAL LTDGTARSYI DGILNGTIDF FKEFGLSMEK MGRIEVKTGT EGEIRKVCSL VNS
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Retrieve as FASTA
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Remarks |
Incorrect prediction, very long protein with splicing error exon3/4. Eurfer_17_6062853_6067395_g38042.t1_-1_CDS_2836118960_29868 |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGAAAAA TGAGCTCTAT TCCTCTTTTT ATCTTTGTCG TCTTCGGCCT TCTGAGCGCC TCTCAAGCTC AACTCAAACA TGGTTTCTAC GAGAAATCCT GTCCACAAGC GGAGAGAATC
GTTCAAGCGT TCGTAAATGA GCATGTCCGG AATGCACCGC CTTTAGCTGC TGCCTTGCTT AGACTGCATT TCCATGACTG TTTTGTCAGG GTGAGTATTA TAAATTACTG TATTTTTCTC
TTTTGGTAAT TGTCATGACG CTCTGATTCC TCTAAGCCTC TCCACTCTTT GTTCCCGAAT ATTTGGTTCT AAAGTTTCAG AAAACACACT GCTTGTGTCC ATCAGTTTCT TGGCCGTCTT
TTTTCTTCGA TCGTTCACTT GGGGAAGATT TGTTTCACTG AAAAAACGGC ATAATAGTTT CACCGGATAA TTAAGTTGTT TTCCGCTCCA AGAAGAAGAC GGGTTCTTAA TTTACCCAAG
TTCCTAACAA GGAACTTCTC CTGCTATCCC CTGACTCGAC GATTTTTCTC AGGGCTGTGA TGCGTCTTTG TTGCTGAACT CCACCAAGGA CAACAAAGCG GAGAAGGATT CTCCACCGGA
CATGGGTATG CGAGGCTTTG ATTTCATAGA TGCAGTGAAG AGCAAGCTAG AAGAATCGTG TCCTGGCGTG GTCTCCTGCG CAGACGTTGT TGCACTAGTA GCAAGAGATG CGGTTGTTCG
CATAGTAAGG CCACCTATAT ATCCAGAAAT CAACTTTTCA TCTTCAAATT ATCACCATGC TCAAAAATGG AATGTATCTC TCTCCGTATG TTACAGGGAG GTCCCCACTG GAATGTTCCT
ACGGGCCGCA GGGACGGAAC AGTTTCTTTG GCATCCGAGA CACCAACCAA CATTCCTCCG CCAACCCTCA GTTTCAGTGA TCTCAAGGAC AGTTTCGCAA AAAAGAATCT TAATGTGAAA
GATCTAGTCA TGCTCTCAGG CGAGTCCTCC TTCTACACTC TTCATTGTCA TCATTAATCC TGCTCTTTAC CATGTTGATA GTAGCCTAGC CCCAACTAAC ATTTCCCTTC AATCGTCCTT
TTTCTTGCAG GTGCGCATAC CATTGGTATT ACTACCTGCA GCTTCGTCTC CAAAAGGCTT TACAATTTCA CAGGAAAAGG AGATCAAGAC CCAACTATGG ACAAATTCTA TGCCGCCAAC
CTAAAGAAAT ATAAGTGCAA AACTCCTCAA GAAGACACCA TGCTGGAAAT GGATCCCGGG AGCTTCACCA CCTTTGACAC TCGTTACTAC ACCAATGTGG TGAAGAGAAG GGGTCTGTTC
ACAACTGACT TGGCCTTGCT CACAGACGGC ACCGCCAGGT CCTACATAGA TGGAATACTC AATGGAACCA TAGACTTCTT TAAGGAGTTT GGCTTGTCCA TGGAGAAGAT GGGTCGGATC
GAAGTGAAGA CTGGAACTGA GGGCGAGATC AGGAAGGTCT GCAGCTTAGT GAATAGCTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGAAAAA TGAGCTCTAT TCCTCTTTTT ATCTTTGTCG TCTTCGGCCT TCTGAGCGCC TCTCAAGCTC AACTCAAACA TGGTTTCTAC GAGAAATCCT GTCCACAAGC GGAGAGAATC
GTTCAAGCGT TCGTAAATGA GCATGTCCGG AATGCACCGC CTTTAGCTGC TGCCTTGCTT AGACTGCATT TCCATGACTG TTTTGTCAGG GGCTGTGATG CGTCTTTGTT GCTGAACTCC
ACCAAGGACA ACAAAGCGGA GAAGGATTCT CCACCGGACA TGGGTATGCG AGGCTTTGAT TTCATAGATG CAGTGAAGAG CAAGCTAGAA GAATCGTGTC CTGGCGTGGT CTCCTGCGCA
GACGTTGTTG CACTAGTAGC AAGAGATGCG GTTGTTCGCA TAGGAGGTCC CCACTGGAAT GTTCCTACGG GCCGCAGGGA CGGAACAGTT TCTTTGGCAT CCGAGACACC AACCAACATT
CCTCCGCCAA CCCTCAGTTT CAGTGATCTC AAGGACAGTT TCGCAAAAAA GAATCTTAAT GTGAAAGATC TAGTCATGCT CTCAGGCGAG TCCTCCTTCT ACACTCTTCA TTGTGCGCAT
ACCATTGGTA TTACTACCTG CAGCTTCGTC TCCAAAAGGC TTTACAATTT CACAGGAAAA GGAGATCAAG ACCCAACTAT GGACAAATTC TATGCCGCCA ACCTAAAGAA ATATAAGTGC
AAAACTCCTC AAGAAGACAC CATGCTGGAA ATGGATCCCG GGAGCTTCAC CACCTTTGAC ACTCGTTACT ACACCAATGT GGTGAAGAGA AGGGGTCTGT TCACAACTGA CTTGGCCTTG
CTCACAGACG GCACCGCCAG GTCCTACATA GATGGAATAC TCAATGGAAC CATAGACTTC TTTAAGGAGT TTGGCTTGTC CATGGAGAAG ATGGGTCGGA TCGAAGTGAA GACTGGAACT
GAGGGCGAGA TCAGGAAGGT CTGCAGCTTA GTGAATAGCT AA
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Retrieve as FASTA
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