Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
317 (294) |
PWM (Da): |
34433.24 (32016.0) |
|
PI (pH): |
7.7 (7.70) |
Peptide Signal: |
cut: 24 range:24-317 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASTSFLLLN LYAIVLMFGS SSAQLTTDFY DDSCPYLFET IRSQVESAIS KEKRMGASLL RLFFHDCFVN GCDGSIFLDD TPTFKGEKNA APNTNSARGF EVIDAIKAAV EKVCPETVSC
ADVLAVTARD AVVTLGGPYW DVKLGRRDAR TASQAAANTS IPQPTNNLSQ LIASFQAQGL SIKEMVALAG GHTIGQARCT NFRNRIYNET NLDPFLASTR KAICPRTSED NNLAPLDLQT
PTFFDNSYYR NLIYKRGLLH SDQQLFSGGS TDSIVKAYSA DGGSFHTDFV KAMIKMGDIK PLTGSAGEIR KNCRKVN
|
Retrieve as FASTA
|
|
Remarks |
Incorrect prediction, only last exon. Eurfer_6_24138463_24147804_g17676.t1_1_CDS_2836184486_20969 |
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCATCTA CTAGTTTTCT GTTACTCAAC CTGTACGCGA TTGTCCTGAT GTTTGGATCT TCTTCTGCCC AATTGACTAC AGATTTCTAT GATGATTCTT GTCCTTATCT CTTCGAGACA
ATCAGATCTC AAGTTGAATC TGCAATTTCT AAAGAGAAGC GAATGGGAGC ATCCCTGCTC CGTCTCTTCT TCCATGACTG CTTTGTCAAT GTATGTCTAC TGAGATTAAA TACCATTTGG
AGAATATTTC CCATAGTTTC GATATATCAT GTCCTCACAG AGCCAATGGT GTTAAGATTC AGGCCAATGC CCTGCTTTCC AATAGCTGGG AGGCTCTGGT AGTGTTCAAG GCTGCATGTT
TTGCACATCT CATCAGCCAA TCCACTGGGA GAGTTTGATT TTTTAGAAAA TCTCATCCTT GATCAAATCT CATCCATATT AATTCAAGCA GTATGGGTAT ACTTTCTGAC TAAGAAAGAA
AGAAAGGAAG TTCACGTACA TTCTCACCAA CTTCCCTTCT CACTCGCTTC TGCATGGCCT CTTATTTGTT CTTAACTAAT TTCTTGTCTA ATTTTCTTCT GAATGTAGTT CCATGCATGT
TCTCTTCTGC ATGGCTTCTC ATCCGTTTTT ATCTCATTTC TAGTTTACCT TTTTCATTCT AATTTGGAAT TTAATCTGTC CTTTGCAAAT CAGGGATGCG ATGGATCGAT TTTCTTAGAC
GACACGCCAA CGTTCAAAGG GGAGAAGAAT GCAGCTCCAA ACACAAACTC TGCTAGAGGC TTTGAAGTAA TCGATGCAAT CAAGGCTGCG GTGGAGAAGG TGTGCCCGGA AACCGTTTCC
TGTGCTGACG TCCTGGCTGT TACAGCGAGG GATGCTGTTG TCACTGTAAG AAATCATTTC CCTCACTTCT CCATCATCTT TTCCTTTCAC TCACTGTCAA ATTCTACTGT ATTGTTTACT
TCAACTTTAC TCCCGTTCAA TTAACTCTCC ACAGCTGGGA GGCCCCTATT GGGATGTGAA ATTAGGAAGA AGAGATGCCA GAACTGCAAG TCAAGCTGCT GCCAATACAA GCATCCCTCA
ACCAACCAAC AACCTCAGTC AACTCATCGC CAGCTTCCAA GCTCAGGGCC TCTCTATCAA GGAAATGGTT GCCTTAGCAG GTCTCTCCCA ATCTCTCTCT CTCTCTCTCT CTCTCTCTGT
TGTGACATGA ACATGCTTGG TCTGTGCAGG TGGCCATACC ATTGGCCAAG CAAGGTGCAC CAACTTCAGG AACAGAATAT ACAATGAGAC CAATTTGGAC CCTTTCCTCG CAAGCACAAG
AAAAGCCATC TGCCCAAGAA CTTCAGAAGA CAACAATTTA GCACCCTTGG ATTTGCAGAC GCCTACCTTC TTTGATAACA GCTACTACCG GAACCTCATT TACAAGAGGG GTCTGCTTCA
CTCTGATCAG CAACTGTTCA GCGGTGGCTC CACCGATTCC ATTGTTAAAG CATACAGTGC AGATGGTGGG TCGTTCCACA CTGATTTTGT CAAGGCCATG ATCAAGATGG GAGACATTAA
GCCCCTTACT GGCTCTGCTG GGGAGATCAG GAAGAATTGC AGGAAGGTGA ACTAA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCATCTA CTAGTTTTCT GTTACTCAAC CTGTACGCGA TTGTCCTGAT GTTTGGATCT TCTTCTGCCC AATTGACTAC AGATTTCTAT GATGATTCTT GTCCTTATCT CTTCGAGACA
ATCAGATCTC AAGTTGAATC TGCAATTTCT AAAGAGAAGC GAATGGGAGC ATCCCTGCTC CGTCTCTTCT TCCATGACTG CTTTGTCAAT GGATGCGATG GATCGATTTT CTTAGACGAC
ACGCCAACGT TCAAAGGGGA GAAGAATGCA GCTCCAAACA CAAACTCTGC TAGAGGCTTT GAAGTAATCG ATGCAATCAA GGCTGCGGTG GAGAAGGTGT GCCCGGAAAC CGTTTCCTGT
GCTGACGTCC TGGCTGTTAC AGCGAGGGAT GCTGTTGTCA CTCTGGGAGG CCCCTATTGG GATGTGAAAT TAGGAAGAAG AGATGCCAGA ACTGCAAGTC AAGCTGCTGC CAATACAAGC
ATCCCTCAAC CAACCAACAA CCTCAGTCAA CTCATCGCCA GCTTCCAAGC TCAGGGCCTC TCTATCAAGG AAATGGTTGC CTTAGCAGGT GGCCATACCA TTGGCCAAGC AAGGTGCACC
AACTTCAGGA ACAGAATATA CAATGAGACC AATTTGGACC CTTTCCTCGC AAGCACAAGA AAAGCCATCT GCCCAAGAAC TTCAGAAGAC AACAATTTAG CACCCTTGGA TTTGCAGACG
CCTACCTTCT TTGATAACAG CTACTACCGG AACCTCATTT ACAAGAGGGG TCTGCTTCAC TCTGATCAGC AACTGTTCAG CGGTGGCTCC ACCGATTCCA TTGTTAAAGC ATACAGTGCA
GATGGTGGGT CGTTCCACAC TGATTTTGTC AAGGCCATGA TCAAGATGGG AGACATTAAG CCCCTTACTG GCTCTGCTGG GGAGATCAGG AAGAATTGCA GGAAGGTGAA CTAA
|
Retrieve as FASTA
|
|