Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
319 (295) |
| PWM (Da): |
33906.91 (31526.7) |
Transmb domain: |
i7-29o |
| PI (pH): |
7.94 (7.70) |
Peptide Signal: |
cut: 25 range:25-319 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAKVSVFSVL VVVMGSVLSS GVTCQQLFPF FYLRTCPQAL RVIRQQVFSA VAKEPRMGAS LLRLHFHDCF VNGCDGSVLL DDTPTMTGEK NALPNANSAR GFEVIDSIKS AVDGACGGSV
VSCADILAVA ARDSVVALGG PSWPVQLGRR DSTTASKDAA NSNLPSPFSS LSDLITSFQS KGLNARDLVA QSGAHTIGQA QCSLFRTRIY NDTNIDPQFA NFLQGSCPAS GGDNNLSPLD
PTPTRFDGVY FANLMLRRGL LHSDQELFNN GSTDQIVRAY RFNPGLFAAD FASAMVKMGN LSPLTGTNGQ IRQNCRTVN
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Retrieve as FASTA
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| Remarks |
Incorrect prediction, end exon 1, exon 2 and start of exon 3 have been found. Eurfer_2_25275792_25278085_g15495.t1_1_CDS_2836127510_16021 |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TCATGTTTCC AAAAATCTTA ATTCCCAACC TGACCAGGAA GGATATTTTT ACTTTTTTAA CATTGAAAAT AGAGCACAGC CCACCATAAT ACATCGTAAT TATAGAATTT GATTGGATCT
ATGATTCTAT GTACGCCGGT TAATGTAATC AATTAGATTT TGAAAAAACT GTCCTCATTT TCAAACGACC AATGAGGGAC ATTTTATTTC TGAAAATTTG AGAAGCATGC AACAGCCCCT
GCTGCCCTCT TCTCTCCACT CTTGTGATCA GTGGCAGAGA TAAATGGTGG CTGGGATCCA CACTAGCCCA TTAAAAAATT AATCGAAGAA CTTAAAGTGA TAATATTATA ATTCAAAAAA
TAAATGGAAT GCCTACTCCA AACTAGGAAT AGCAACTCAA GTGTTCATAC AATCAGAAAA TTCTGGCTCA GCCAGCCGTT CTCATCAAAT TAAGCAAAGA AAACGGCCAA ATGCTCACCA
GTGGGGTACT AAATTCCAAA AGAGAAAACA GTAAAAGTTA AAATACTATA AATACTGAGA ACACCGTATA AAAGTTGGTT CATGTAACAC AGAAAAACAA TGTATATATA TGTGCTAAGC
AGAAGCAATA TATACTAAAA TATTCTATCA TCAGGTGCGC GGTGGATGTT CGAAAGACCC GGGAGAAGGC GCCGACCTAC TTTGTTGCCC CCTACCTATA GAAGCCGGAA TCTGCTTCTG
AAGTCTGACG CCAGCTTCAA ATTAGTGAGT AGAGCCTTTT AACTAGGAGA TGATGATGAT GAGAAGTTCT GCTAAAGTTC AGCACAAATC GCGGGCTCAA GCGAGCGAGT CTTATCTTTT
TACAGTTGCA GGCTTTTAAT GAATGGCCTC TTTTTTCTTC CTCCCGCACA CAGTCTCTCA GCAAGGGAAC TCCGTGACAG AGTCAGCAAA GTTGTGCCAT CTTGTTCAGA CAGGTAAGTC
AAGCATTCTG AGAGCGTGGT CTTGACCAGA TTTGGGTATA AATATCCATT GCCTGATTGA CCGTACATCA CCATCATCAC TGCTACAATC CCAATCAGGG ATGATGCCAA TGTTTCGGGG
AACGAGTAGA ATTCGATGTT CTACTCTGCA TAATAAATAC TTTTCACCTA AACTCTGCAG ATGATCATGA TTTTCAAGTT CATCGCCCAT GGTGGTAAGG TTAATGTAAA GGCAATTAGC
AGAGAGTAGT CACAAAGACG ACAGAATCAC GAGCAGCAAC GACCAATATA TCAGCAATGT CCCTCATTGG TCGTTTGAAA ATGAGGACAG TTTTTCAAAA TCTAATTGAT TACATTAACC
GGCGTACATA GAATCATAGA TCCAATCAAA TTCTATAATT ACGATAATTA ATATATAATT GAAGTACCCT TTGTCTTGTG AAAAGCAACT ACCACAGGAA GTTATTCAAG TTGACTGTGG
GGTGCACTCA CACGGTGCAC CGACCTGGTG CGTTGACTGC TGCAGGGTGC ACCGGCGGTT CACGAGCAGT TCGCATTACA GAGAGCTGGT GCACTTCATG CATGCAGACA AAGGGGTAAA
TGACGACGGA GTGGAAGGTT GAACATTTCA AAGTTTGACG AACGAAAAAT ATTGTGTGGC TGCCGACTCC TCAAGTCAAC CCTTAGTTTG TTGGATAACT CTCAAGTAAT AAATGCCTTG
AACTTTGACT TGCTTTTGTT TCTACGCACT CAAGAAGCAA CAGTCACGAG AGTTTCGTAA ACTTCAGTCT ATAAATTAAT ACACACCACA TGAAGGAGCA CCACCACAAC CAGCAGATCT
CTCTCTCTTT CTCTGAGTTT TGGCTATTCG ACATGGCCAA GGTTTCTGTA TTCTCAGTCT TAGTGGTGGT GATGGGTTCG GTTCTTTCTT CAGGAGTTAC TTGTCAACAG CTCTTCCCCT
TCTTCTACCT GAGAACATGC CCACAGGCTC TGCGTGTTAT AAGGCAACAA GTTTTTTCTG CCGTTGCAAA GGAGCCACGG ATGGGAGCCT CGTTGCTGCG GCTTCACTTC CACGACTGCT
TTGTCAATGT CTTCTACGTC CCACAGTCTC GCTCGTTCAA TCCCTATCTA TCATTAACTA AACAGAAAAC TCCCGTTTCT CTGCACCTCC TTCCCTCTCT GCAAATTCTA CGTGCAATGT
TGTCTTATGC ATACTGTCGA ACAAGACTTC AATTGGTTGC TTCTGTATTG ACAGGGATGC GATGGTTCTG TTCTTTTGGA CGACACGCCC ACCATGACAG GGGAGAAGAA CGCCCTGCCC
AACGCCAATT CAGCCCGGGG CTTTGAGGTC ATCGACAGCA TCAAGTCGGC CGTCGACGGA GCTTGTGGAG GCAGCGTCGT CTCTTGTGCT GATATATTGG CGGTTGCTGC TCGTGATTCT
GTCGTCGCTG TGAGTACTCG AAGCTTGCCT TTACAGTATT TACTATATAT ATATATATAT GATGTGAATA AACCTGAAAA CCTTGATCTT TAGACTAACC TGTACTTGAA TATGTATATT
AATATGCAGC TAGGAGGACC ATCATGGCCG GTGCAACTGG GGAGGAGGGA CTCCACCACT GCCAGCAAAG ATGCAGCTAA CAGCAACCTC CCCTCTCCCT TCTCCAGCCT CTCCGACCTC
ATTACCAGCT TCCAGAGCAA AGGCCTGAAT GCCAGAGACC TTGTTGCACA GTCCGGAGCT CACACCATCG GCCAAGCACA GTGCTCGCTC TTCAGAACCC GCATCTACAA CGACACCAAC
ATCGATCCAC AGTTCGCCAA CTTTTTGCAA GGGTCATGTC CTGCTTCTGG TGGAGACAAC AACCTCTCTC CCTTGGATCC AACGCCCACG AGATTTGATG GGGTTTACTT TGCTAACTTG
ATGTTGAGGA GAGGATTGCT GCATTCAGAT CAGGAGCTGT TCAACAATGG AAGTACTGAT CAGATCGTGA GAGCCTACAG ATTCAACCCT GGTCTTTTTG CTGCAGACTT TGCCAGTGCG
ATGGTTAAGA TGGGAAACTT GAGCCCTCTC ACCGGAACAA ATGGCCAGAT TCGCCAAAAC TGCCGGACAG TCAACTG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
| ATGGCCAAGG TTTCTGTATT CTCAGTCTTA GTGGTGGTGA TGGGTTCGGT TCTTTCTTCA GGAGTTACTT GTCAACAGCT CTTCCCCTTC TTCTACCTGA GAACATGCCC ACAGGCTCTG
CGTGTTATAA GGCAACAAGT TTTTTCTGCC GTTGCAAAGG AGCCACGGAT GGGAGCCTCG TTGCTGCGGC TTCACTTCCA CGACTGCTTT GTCAATGGAT GCGATGGTTC TGTTCTTTTG
GACGACACGC CCACCATGAC AGGGGAGAAG AACGCCCTGC CCAACGCCAA TTCAGCCCGG GGCTTTGAGG TCATCGACAG CATCAAGTCG GCCGTCGACG GAGCTTGTGG AGGCAGCGTC
GTCTCTTGTG CTGATATATT GGCGGTTGCT GCTCGTGATT CTGTCGTCGC TCTAGGAGGA CCATCATGGC CGGTGCAACT GGGGAGGAGG GACTCCACCA CTGCCAGCAA AGATGCAGCT
AACAGCAACC TCCCCTCTCC CTTCTCCAGC CTCTCCGACC TCATTACCAG CTTCCAGAGC AAAGGCCTGA ATGCCAGAGA CCTTGTTGCA CAGTCCGGAG CTCACACCAT CGGCCAAGCA
CAGTGCTCGC TCTTCAGAAC CCGCATCTAC AACGACACCA ACATCGATCC ACAGTTCGCC AACTTTTTGC AAGGGTCATG TCCTGCTTCT GGTGGAGACA ACAACCTCTC TCCCTTGGAT
CCAACGCCCA CGAGATTTGA TGGGGTTTAC TTTGCTAACT TGATGTTGAG GAGAGGATTG CTGCATTCAG ATCAGGAGCT GTTCAACAAT GGAAGTACTG ATCAGATCGT GAGAGCCTAC
AGATTCAACC CTGGTCTTTT TGCTGCAGAC TTTGCCAGTG CGATGGTTAA GATGGGAAAC TTGAGCCCTC TCACCGGAAC AAATGGCCAG ATTCGCCAAA ACTGCCGGAC AGTCAACTGA
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Retrieve as FASTA
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